RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
GDE1-204ENST00000569773 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
GDE1-204ENST00000569773 RASEFQ8IZ41 740 aa12□□□□□ -0.49
GDE1-204ENST00000569773 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
GDE1-204ENST00000569773 RB1CC1Q8TDY2 1594 aa12□□□□□ -0.49
GDE1-204ENST00000569773 GSE1Q14687 1217 aa11.99□□□□□ -0.49
GDE1-204ENST00000569773 EVX2Q03828 476 aa11.98□□□□□ -0.49
GDE1-204ENST00000569773 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
GDE1-204ENST00000569773 RGL2O15211 777 aa11.94□□□□□ -0.5
GDE1-204ENST00000569773 CLCN6P51797 869 aa11.93□□□□□ -0.5
GDE1-204ENST00000569773 NACADO15069 1562 aa11.92□□□□□ -0.5
GDE1-204ENST00000569773 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
GDE1-204ENST00000569773 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
GDE1-204ENST00000569773 UNC13AQ9UPW8 1703 aa11.87□□□□□ -0.51
GDE1-204ENST00000569773 GABBR2O75899 941 aa11.85□□□□□ -0.51
GDE1-204ENST00000569773 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
GDE1-204ENST00000569773 PYGBP11216 843 aa11.82□□□□□ -0.52
GDE1-204ENST00000569773 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
GDE1-204ENST00000569773 CHRM1P11229 460 aaPredicted RBP11.79□□□□□ -0.52
GDE1-204ENST00000569773 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
GDE1-204ENST00000569773 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
GDE1-204ENST00000569773 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
GDE1-204ENST00000569773 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
GDE1-204ENST00000569773 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
GDE1-204ENST00000569773 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
GDE1-204ENST00000569773 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
GDE1-204ENST00000569773 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
GDE1-204ENST00000569773 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
GDE1-204ENST00000569773 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
GDE1-204ENST00000569773 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
GDE1-204ENST00000569773 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
GDE1-204ENST00000569773 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
GDE1-204ENST00000569773 LHX8Q68G74 356 aa11.66□□□□□ -0.54
GDE1-204ENST00000569773 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
GDE1-204ENST00000569773 DCAF1Q9Y4B6 1507 aa11.65□□□□□ -0.55
GDE1-204ENST00000569773 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
GDE1-204ENST00000569773 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
GDE1-204ENST00000569773 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
GDE1-204ENST00000569773 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
GDE1-204ENST00000569773 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
GDE1-204ENST00000569773 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
GDE1-204ENST00000569773 STK25O00506 426 aa11.62□□□□□ -0.55
GDE1-204ENST00000569773 MAP3K13O43283 966 aa11.62□□□□□ -0.55
GDE1-204ENST00000569773 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
GDE1-204ENST00000569773 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
GDE1-204ENST00000569773 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
GDE1-204ENST00000569773 DCBLD2Q96PD2 775 aa11.6□□□□□ -0.55
GDE1-204ENST00000569773 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
GDE1-204ENST00000569773 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
GDE1-204ENST00000569773 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
GDE1-204ENST00000569773 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
GDE1-204ENST00000569773 STK24Q9Y6E0 443 aa11.57□□□□□ -0.56
GDE1-204ENST00000569773 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
GDE1-204ENST00000569773 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
GDE1-204ENST00000569773 PSEN1P49768 467 aa11.53□□□□□ -0.56
GDE1-204ENST00000569773 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
GDE1-204ENST00000569773 HAP1P54257 671 aaPredicted RBP11.51□□□□□ -0.57
GDE1-204ENST00000569773 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
GDE1-204ENST00000569773 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
GDE1-204ENST00000569773 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
GDE1-204ENST00000569773 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
GDE1-204ENST00000569773 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
GDE1-204ENST00000569773 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
GDE1-204ENST00000569773 GTPBP6O43824 516 aaPredicted RBP11.41□□□□□ -0.58
GDE1-204ENST00000569773 CC2D2AQ9P2K1 1620 aa11.41□□□□□ -0.58
GDE1-204ENST00000569773 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
GDE1-204ENST00000569773 GALR2O43603 387 aaPredicted RBP11.39□□□□□ -0.59
GDE1-204ENST00000569773 EIF4G1Q04637 1599 aaKnown RBP11.38□□□□□ -0.59
GDE1-204ENST00000569773 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
GDE1-204ENST00000569773 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
GDE1-204ENST00000569773 TSHZ2Q9NRE2 1034 aa11.36□□□□□ -0.59
GDE1-204ENST00000569773 TIE1P35590 1138 aa11.33□□□□□ -0.6
GDE1-204ENST00000569773 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
GDE1-204ENST00000569773 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
GDE1-204ENST00000569773 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
GDE1-204ENST00000569773 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
GDE1-204ENST00000569773 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
GDE1-204ENST00000569773 GOLGA2Q08379 1002 aa11.3□□□□□ -0.6
GDE1-204ENST00000569773 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
GDE1-204ENST00000569773 SOX12O15370 315 aa11.28□□□□□ -0.6
GDE1-204ENST00000569773 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
GDE1-204ENST00000569773 KDM2AQ9Y2K7 1162 aa11.26□□□□□ -0.61
GDE1-204ENST00000569773 NLRP6P59044 892 aa11.25□□□□□ -0.61
GDE1-204ENST00000569773 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
GDE1-204ENST00000569773 SLC39A7Q92504 469 aa11.25□□□□□ -0.61
GDE1-204ENST00000569773 C7P10643 843 aa11.24□□□□□ -0.61
GDE1-204ENST00000569773 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
GDE1-204ENST00000569773 ASTLQ6HA08 431 aaPredicted RBP11.24□□□□□ -0.61
GDE1-204ENST00000569773 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
GDE1-204ENST00000569773 ATN1P54259 1190 aaPredicted RBP11.21□□□□□ -0.61
GDE1-204ENST00000569773 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
GDE1-204ENST00000569773 PPP1R37O75864 691 aa11.2□□□□□ -0.62
GDE1-204ENST00000569773 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
GDE1-204ENST00000569773 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
GDE1-204ENST00000569773 METRNQ9UJH8 293 aa11.17□□□□□ -0.62
GDE1-204ENST00000569773 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
GDE1-204ENST00000569773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.62
GDE1-204ENST00000569773 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
GDE1-204ENST00000569773 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
GDE1-204ENST00000569773 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms