RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 CLCN6P51797 869 aa10.21□□□□□ -0.77
KARS-211ENST00000569298 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
KARS-211ENST00000569298 FBXO3Q9UK99 471 aa10.21□□□□□ -0.77
KARS-211ENST00000569298 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
KARS-211ENST00000569298 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
KARS-211ENST00000569298 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
KARS-211ENST00000569298 FAM9AQ8IZU1 332 aaPredicted RBP10.14□□□□□ -0.79
KARS-211ENST00000569298 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
KARS-211ENST00000569298 ZEB1P37275 1124 aaPredicted RBP10.09□□□□□ -0.79
KARS-211ENST00000569298 PHF12Q96QT6 1004 aa10.08□□□□□ -0.8
KARS-211ENST00000569298 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
KARS-211ENST00000569298 VASPP50552 380 aaPredicted RBP10.06□□□□□ -0.8
KARS-211ENST00000569298 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
KARS-211ENST00000569298 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
KARS-211ENST00000569298 ACIN1Q9UKV3 1341 aaKnown RBP10.06□□□□□ -0.8
KARS-211ENST00000569298 NUBP1P53384 320 aa10.05□□□□□ -0.8
KARS-211ENST00000569298 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
KARS-211ENST00000569298 POTEIP0CG38 1075 aa10.03□□□□□ -0.8
KARS-211ENST00000569298 DCBLD2Q96PD2 775 aa9.99□□□□□ -0.81
KARS-211ENST00000569298 ANP32EQ9BTT0 268 aa9.99□□□□□ -0.81
KARS-211ENST00000569298 KIF12Q96FN5 646 aa9.98□□□□□ -0.81
KARS-211ENST00000569298 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
KARS-211ENST00000569298 EIF5BO60841 1220 aaKnown RBP9.96□□□□□ -0.82
KARS-211ENST00000569298 FAM212AQ96EL1 285 aa9.96□□□□□ -0.82
KARS-211ENST00000569298 KLHL34Q8N239 644 aa9.94□□□□□ -0.82
KARS-211ENST00000569298 PPARGC1BQ86YN6 1023 aaKnown RBP9.93□□□□□ -0.82
KARS-211ENST00000569298 MAP3K13O43283 966 aa9.91□□□□□ -0.82
KARS-211ENST00000569298 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
KARS-211ENST00000569298 SGIP1Q9BQI5 828 aa9.9□□□□□ -0.82
KARS-211ENST00000569298 DCAF8Q5TAQ9 597 aa9.88□□□□□ -0.83
KARS-211ENST00000569298 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
KARS-211ENST00000569298 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
KARS-211ENST00000569298 ATMINO43313 823 aaPredicted RBP9.85□□□□□ -0.83
KARS-211ENST00000569298 GSE1Q14687 1217 aa9.84□□□□□ -0.83
KARS-211ENST00000569298 LHX8Q68G74 356 aa9.84□□□□□ -0.83
KARS-211ENST00000569298 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
KARS-211ENST00000569298 PCDHB13Q9Y5F0 798 aa9.84□□□□□ -0.83
KARS-211ENST00000569298 TIE1P35590 1138 aa9.82□□□□□ -0.84
KARS-211ENST00000569298 TRPC6Q9Y210 931 aa9.82□□□□□ -0.84
KARS-211ENST00000569298 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
KARS-211ENST00000569298 IFNL1Q8IU54 200 aa9.8□□□□□ -0.84
KARS-211ENST00000569298 CLSPNQ9HAW4 1339 aa9.8□□□□□ -0.84
KARS-211ENST00000569298 PYGBP11216 843 aa9.79□□□□□ -0.84
KARS-211ENST00000569298 ATN1P54259 1190 aaPredicted RBP9.79□□□□□ -0.84
KARS-211ENST00000569298 BMP2KQ9NSY1 1161 aaPredicted RBP9.79□□□□□ -0.84
KARS-211ENST00000569298 NEUROD1Q13562 356 aa9.78□□□□□ -0.84
KARS-211ENST00000569298 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
KARS-211ENST00000569298 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
KARS-211ENST00000569298 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
KARS-211ENST00000569298 PCGF6Q9BYE7 350 aa9.77□□□□□ -0.85
KARS-211ENST00000569298 TTLL13PA6NNM8 815 aa9.75□□□□□ -0.85
KARS-211ENST00000569298 C7P10643 843 aa9.75□□□□□ -0.85
KARS-211ENST00000569298 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
KARS-211ENST00000569298 ERICH6BQ5W0A0 696 aa9.72□□□□□ -0.85
KARS-211ENST00000569298 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
KARS-211ENST00000569298 CIZ1Q9ULV3 898 aaPredicted RBP9.71□□□□□ -0.86
KARS-211ENST00000569298 PCDHB8Q9UN66 801 aa9.71□□□□□ -0.86
KARS-211ENST00000569298 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
KARS-211ENST00000569298 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
KARS-211ENST00000569298 POTEB2H3BUK9 544 aa9.69□□□□□ -0.86
KARS-211ENST00000569298 TMEM106CQ9BVX2 250 aa9.69□□□□□ -0.86
KARS-211ENST00000569298 TRIM35Q9UPQ4 493 aa9.69□□□□□ -0.86
KARS-211ENST00000569298 IER5LQ5T953 404 aa9.67□□□□□ -0.86
KARS-211ENST00000569298 POTEFA5A3E0 1075 aa9.65□□□□□ -0.86
KARS-211ENST00000569298 TRIM41Q8WV44 630 aa9.65□□□□□ -0.86
KARS-211ENST00000569298 PKD2Q13563 968 aa9.62□□□□□ -0.87
KARS-211ENST00000569298 OTUD5Q96G74 571 aa9.62□□□□□ -0.87
KARS-211ENST00000569298 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
KARS-211ENST00000569298 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
KARS-211ENST00000569298 POTEJP0CG39 1038 aa9.6□□□□□ -0.87
KARS-211ENST00000569298 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
KARS-211ENST00000569298 SEC24BO95487 1268 aa9.59□□□□□ -0.87
KARS-211ENST00000569298 PSEN1P49768 467 aa9.59□□□□□ -0.87
KARS-211ENST00000569298 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
KARS-211ENST00000569298 PDAP1Q13442 181 aaKnown RBP9.58□□□□□ -0.88
KARS-211ENST00000569298 IRX5P78411 483 aaPredicted RBP9.56□□□□□ -0.88
KARS-211ENST00000569298 MAMSTRQ6ZN01 415 aa9.56□□□□□ -0.88
KARS-211ENST00000569298 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
KARS-211ENST00000569298 ARXQ96QS3 562 aa9.55□□□□□ -0.88
KARS-211ENST00000569298 PLCG2P16885 1265 aa9.53□□□□□ -0.88
KARS-211ENST00000569298 RANGAP1P46060 587 aaPredicted RBP9.53□□□□□ -0.88
KARS-211ENST00000569298 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
KARS-211ENST00000569298 HAP1P54257 671 aaPredicted RBP9.51□□□□□ -0.89
KARS-211ENST00000569298 RNF25Q96BH1 459 aaPredicted RBP9.51□□□□□ -0.89
KARS-211ENST00000569298 PODXL2Q9NZ53 605 aa9.51□□□□□ -0.89
KARS-211ENST00000569298 GOLGA2Q08379 1002 aa9.5□□□□□ -0.89
KARS-211ENST00000569298 SCUBE2Q9NQ36 999 aa9.5□□□□□ -0.89
KARS-211ENST00000569298 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
KARS-211ENST00000569298 MKRN3Q13064 507 aaKnown RBP9.49□□□□□ -0.89
KARS-211ENST00000569298 PKNOX2Q96KN3 472 aa9.49□□□□□ -0.89
KARS-211ENST00000569298 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
KARS-211ENST00000569298 ILDR1Q86SU0 546 aaPredicted RBP9.46□□□□□ -0.9
KARS-211ENST00000569298 PDCD7Q8N8D1 485 aaKnown RBP9.46□□□□□ -0.9
KARS-211ENST00000569298 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
KARS-211ENST00000569298 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
KARS-211ENST00000569298 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
KARS-211ENST00000569298 NEFLP07196 543 aa9.44□□□□□ -0.9
KARS-211ENST00000569298 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
KARS-211ENST00000569298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.44□□□□□ -0.91e-8■□□□□ 8.5
KARS-211ENST00000569298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms