RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PHF12Q96QT6 1004 aa9.64□□□□□ -0.87
HMGB1P6-201ENST00000569046 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
HMGB1P6-201ENST00000569046 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
HMGB1P6-201ENST00000569046 GSE1Q14687 1217 aa9.62□□□□□ -0.87
HMGB1P6-201ENST00000569046 PKD2Q13563 968 aa9.6□□□□□ -0.87
HMGB1P6-201ENST00000569046 PYGBP11216 843 aa9.58□□□□□ -0.88
HMGB1P6-201ENST00000569046 SP7Q8TDD2 431 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P6-201ENST00000569046 KIF12Q96FN5 646 aa9.57□□□□□ -0.88
HMGB1P6-201ENST00000569046 MAP3K13O43283 966 aa9.55□□□□□ -0.88
HMGB1P6-201ENST00000569046 GABBR2O75899 941 aa9.54□□□□□ -0.88
HMGB1P6-201ENST00000569046 RTN4Q9NQC3 1192 aaKnown RBP9.53□□□□□ -0.88
HMGB1P6-201ENST00000569046 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P6-201ENST00000569046 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P6-201ENST00000569046 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
HMGB1P6-201ENST00000569046 ECM2O94769 699 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P6-201ENST00000569046 PCDHB13Q9Y5F0 798 aa9.49□□□□□ -0.89
HMGB1P6-201ENST00000569046 IFNL1Q8IU54 200 aa9.48□□□□□ -0.89
HMGB1P6-201ENST00000569046 TRIM41Q8WV44 630 aa9.48□□□□□ -0.89
HMGB1P6-201ENST00000569046 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
HMGB1P6-201ENST00000569046 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
HMGB1P6-201ENST00000569046 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
HMGB1P6-201ENST00000569046 TRPC6Q9Y210 931 aa9.47□□□□□ -0.89
HMGB1P6-201ENST00000569046 CLCN6P51797 869 aa9.46□□□□□ -0.9
HMGB1P6-201ENST00000569046 SGIP1Q9BQI5 828 aa9.46□□□□□ -0.9
HMGB1P6-201ENST00000569046 RGL2O15211 777 aa9.45□□□□□ -0.9
HMGB1P6-201ENST00000569046 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P6-201ENST00000569046 RIOK3O14730 519 aaKnown RBP9.39□□□□□ -0.91
HMGB1P6-201ENST00000569046 POTEIP0CG38 1075 aa9.39□□□□□ -0.91
HMGB1P6-201ENST00000569046 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
HMGB1P6-201ENST00000569046 TIE1P35590 1138 aa9.35□□□□□ -0.91
HMGB1P6-201ENST00000569046 PSEN1P49768 467 aa9.34□□□□□ -0.91
HMGB1P6-201ENST00000569046 DCBLD2Q96PD2 775 aa9.34□□□□□ -0.91
HMGB1P6-201ENST00000569046 TTLL13PA6NNM8 815 aa9.33□□□□□ -0.92
HMGB1P6-201ENST00000569046 ATMINO43313 823 aaPredicted RBP9.33□□□□□ -0.92
HMGB1P6-201ENST00000569046 PDAP1Q13442 181 aaKnown RBP9.33□□□□□ -0.92
HMGB1P6-201ENST00000569046 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
HMGB1P6-201ENST00000569046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P6-201ENST00000569046 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P6-201ENST00000569046 ATN1P54259 1190 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P6-201ENST00000569046 PELP1Q8IZL8 1130 aaKnown RBP9.32□□□□□ -0.92
HMGB1P6-201ENST00000569046 ZFP91Q96JP5 570 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P6-201ENST00000569046 TMEM106CQ9BVX2 250 aa9.32□□□□□ -0.92
HMGB1P6-201ENST00000569046 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
HMGB1P6-201ENST00000569046 DCAF8L2P0C7V8 631 aa9.26□□□□□ -0.93
HMGB1P6-201ENST00000569046 STK25O00506 426 aa9.24□□□□□ -0.93
HMGB1P6-201ENST00000569046 BCL11BQ9C0K0 894 aaPredicted RBP9.24□□□□□ -0.93
HMGB1P6-201ENST00000569046 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
HMGB1P6-201ENST00000569046 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
HMGB1P6-201ENST00000569046 STK24Q9Y6E0 443 aa9.23□□□□□ -0.93
HMGB1P6-201ENST00000569046 CHGAP10645 457 aaKnown RBP9.22□□□□□ -0.93
HMGB1P6-201ENST00000569046 HS6ST3Q8IZP7 471 aa9.21□□□□□ -0.94
HMGB1P6-201ENST00000569046 EFCAB3Q8N7B9 438 aa9.19□□□□□ -0.94
HMGB1P6-201ENST00000569046 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
HMGB1P6-201ENST00000569046 SLC39A7Q92504 469 aa9.17□□□□□ -0.94
HMGB1P6-201ENST00000569046 METRNQ9UJH8 293 aa9.17□□□□□ -0.94
HMGB1P6-201ENST00000569046 GOLGA2Q08379 1002 aa9.16□□□□□ -0.94
HMGB1P6-201ENST00000569046 COLQQ9Y215 455 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P6-201ENST00000569046 C7P10643 843 aa9.15□□□□□ -0.94
HMGB1P6-201ENST00000569046 IRX5P78411 483 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P6-201ENST00000569046 MKRN3Q13064 507 aaKnown RBP9.15□□□□□ -0.94
HMGB1P6-201ENST00000569046 IER5LQ5T953 404 aa9.15□□□□□ -0.94
HMGB1P6-201ENST00000569046 NKX1-1Q15270 411 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P6-201ENST00000569046 ILDR1Q86SU0 546 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P6-201ENST00000569046 DNAJC5Q9H3Z4 198 aa9.12□□□□□ -0.95
HMGB1P6-201ENST00000569046 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
HMGB1P6-201ENST00000569046 MFRPQ9BY79 579 aa9.11□□□□□ -0.95
HMGB1P6-201ENST00000569046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.95
HMGB1P6-201ENST00000569046 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
HMGB1P6-201ENST00000569046 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
HMGB1P6-201ENST00000569046 SOX12O15370 315 aa9.1□□□□□ -0.95
HMGB1P6-201ENST00000569046 SEC24BO95487 1268 aa9.09□□□□□ -0.95
HMGB1P6-201ENST00000569046 FBXO22Q8NEZ5 403 aa9.09□□□□□ -0.95
HMGB1P6-201ENST00000569046 MS4A4AQ96JQ5 239 aa9.09□□□□□ -0.95
HMGB1P6-201ENST00000569046 OCEL1Q9H607 264 aa9.09□□□□□ -0.95
HMGB1P6-201ENST00000569046 PLCG2P16885 1265 aa9.08□□□□□ -0.96
HMGB1P6-201ENST00000569046 DPY19L2Q6NUT2 758 aa9.07□□□□□ -0.96
HMGB1P6-201ENST00000569046 POTEJP0CG39 1038 aa9.06□□□□□ -0.96
HMGB1P6-201ENST00000569046 NLRP6P59044 892 aa9.04□□□□□ -0.96
HMGB1P6-201ENST00000569046 BBXQ8WY36 941 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P6-201ENST00000569046 GTPBP6O43824 516 aaPredicted RBP9.02□□□□□ -0.97
HMGB1P6-201ENST00000569046 PPP1R37O75864 691 aa9.01□□□□□ -0.97
HMGB1P6-201ENST00000569046 LHX8Q68G74 356 aa9□□□□□ -0.97
HMGB1P6-201ENST00000569046 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P6-201ENST00000569046 MICALL2Q8IY33 904 aa8.94□□□□□ -0.98
HMGB1P6-201ENST00000569046 L3MBTL3Q96JM7 780 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P6-201ENST00000569046 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
HMGB1P6-201ENST00000569046 PAXIP1Q6ZW49 1069 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P6-201ENST00000569046 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
HMGB1P6-201ENST00000569046 TMEM121BQ9BXQ6 578 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P6-201ENST00000569046 SPRYD3Q8NCJ5 442 aa8.92□□□□□ -0.98
HMGB1P6-201ENST00000569046 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
HMGB1P6-201ENST00000569046 RYDENQ9NUL5 291 aaKnown RBP8.91□□□□□ -0.98
HMGB1P6-201ENST00000569046 G3V3G9 751 aa8.87□□□□□ -0.99
HMGB1P6-201ENST00000569046 MAMSTRQ6ZN01 415 aa8.87□□□□□ -0.99
HMGB1P6-201ENST00000569046 SCUBE2Q9NQ36 999 aa8.87□□□□□ -0.99
HMGB1P6-201ENST00000569046 TMEM92Q6UXU6 159 aa8.86□□□□□ -0.99
HMGB1P6-201ENST00000569046 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
HMGB1P6-201ENST00000569046 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.85□□□□□ -0.99
HMGB1P6-201ENST00000569046 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
HMGB1P6-201ENST00000569046 CADPS2Q86UW7 1296 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms