RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ZNF579Q8NAF0 562 aaKnown RBP14.72□□□□□ -0.05
SMG1-214ENST00000568038 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
SMG1-214ENST00000568038 PHF12Q96QT6 1004 aa14.68□□□□□ -0.06
SMG1-214ENST00000568038 CLCN6P51797 869 aa14.62□□□□□ -0.07
SMG1-214ENST00000568038 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
SMG1-214ENST00000568038 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
SMG1-214ENST00000568038 RASEFQ8IZ41 740 aa14.59□□□□□ -0.07
SMG1-214ENST00000568038 GALR2O43603 387 aaPredicted RBP14.58□□□□□ -0.08
SMG1-214ENST00000568038 SHROOM4Q9ULL8 1493 aa14.57□□□□□ -0.08
SMG1-214ENST00000568038 DCBLD2Q96PD2 775 aa14.56□□□□□ -0.08
SMG1-214ENST00000568038 VASPP50552 380 aaPredicted RBP14.55□□□□□ -0.08
SMG1-214ENST00000568038 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
SMG1-214ENST00000568038 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
SMG1-214ENST00000568038 KLHL34Q8N239 644 aa14.52□□□□□ -0.09
SMG1-214ENST00000568038 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
SMG1-214ENST00000568038 NUBP1P53384 320 aa14.5□□□□□ -0.09
SMG1-214ENST00000568038 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
SMG1-214ENST00000568038 FAM212AQ96EL1 285 aa14.42□□□□□ -0.1
SMG1-214ENST00000568038 KIF12Q96FN5 646 aa14.42□□□□□ -0.1
SMG1-214ENST00000568038 DCAF8Q5TAQ9 597 aa14.41□□□□□ -0.1
SMG1-214ENST00000568038 BICRAQ9NZM4 1560 aa14.41□□□□□ -0.1
SMG1-214ENST00000568038 MAP3K13O43283 966 aa14.39□□□□□ -0.11
SMG1-214ENST00000568038 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
SMG1-214ENST00000568038 LHX8Q68G74 356 aa14.3□□□□□ -0.12
SMG1-214ENST00000568038 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
SMG1-214ENST00000568038 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
SMG1-214ENST00000568038 PYGBP11216 843 aa14.27□□□□□ -0.13
SMG1-214ENST00000568038 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
SMG1-214ENST00000568038 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
SMG1-214ENST00000568038 SPOCK2Q92563 424 aa14.25□□□□□ -0.13
SMG1-214ENST00000568038 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
SMG1-214ENST00000568038 GSE1Q14687 1217 aa14.22□□□□□ -0.13
SMG1-214ENST00000568038 ATN1P54259 1190 aaPredicted RBP14.21□□□□□ -0.13
SMG1-214ENST00000568038 IFNL1Q8IU54 200 aa14.21□□□□□ -0.13
SMG1-214ENST00000568038 SGIP1Q9BQI5 828 aa14.2□□□□□ -0.14
SMG1-214ENST00000568038 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
SMG1-214ENST00000568038 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
SMG1-214ENST00000568038 TIE1P35590 1138 aa14.16□□□□□ -0.14
SMG1-214ENST00000568038 METRNQ9UJH8 293 aa14.14□□□□□ -0.15
SMG1-214ENST00000568038 SLC39A7Q92504 469 aa14.13□□□□□ -0.15
SMG1-214ENST00000568038 PCDHB8Q9UN66 801 aa14.13□□□□□ -0.15
SMG1-214ENST00000568038 TTLL13PA6NNM8 815 aa14.12□□□□□ -0.15
SMG1-214ENST00000568038 C7P10643 843 aa14.11□□□□□ -0.15
SMG1-214ENST00000568038 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
SMG1-214ENST00000568038 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
SMG1-214ENST00000568038 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
SMG1-214ENST00000568038 TRIM35Q9UPQ4 493 aa14.06□□□□□ -0.16
SMG1-214ENST00000568038 CHRM1P11229 460 aaPredicted RBP14.02□□□□□ -0.17
SMG1-214ENST00000568038 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
SMG1-214ENST00000568038 SEC24BO95487 1268 aa14□□□□□ -0.17
SMG1-214ENST00000568038 ZNF467Q7Z7K2 595 aaPredicted RBP14□□□□□ -0.17
SMG1-214ENST00000568038 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
SMG1-214ENST00000568038 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
SMG1-214ENST00000568038 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
SMG1-214ENST00000568038 POTEFA5A3E0 1075 aa13.95□□□□□ -0.18
SMG1-214ENST00000568038 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
SMG1-214ENST00000568038 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
SMG1-214ENST00000568038 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
SMG1-214ENST00000568038 PSEN1P49768 467 aa13.91□□□□□ -0.18
SMG1-214ENST00000568038 IER5LQ5T953 404 aa13.91□□□□□ -0.18
SMG1-214ENST00000568038 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
SMG1-214ENST00000568038 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
SMG1-214ENST00000568038 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
SMG1-214ENST00000568038 GOLGA2Q08379 1002 aa13.87□□□□□ -0.19
SMG1-214ENST00000568038 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
SMG1-214ENST00000568038 PLCG2P16885 1265 aa13.85□□□□□ -0.19
SMG1-214ENST00000568038 PDAP1Q13442 181 aaKnown RBP13.85□□□□□ -0.19
SMG1-214ENST00000568038 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
SMG1-214ENST00000568038 WIZO95785 1651 aa13.83□□□□□ -0.2
SMG1-214ENST00000568038 MAMSTRQ6ZN01 415 aa13.83□□□□□ -0.2
SMG1-214ENST00000568038 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
SMG1-214ENST00000568038 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
SMG1-214ENST00000568038 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
SMG1-214ENST00000568038 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
SMG1-214ENST00000568038 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
SMG1-214ENST00000568038 OCEL1Q9H607 264 aa13.78□□□□□ -0.2
SMG1-214ENST00000568038 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
SMG1-214ENST00000568038 CABP2Q9NPB3 220 aa13.77□□□□□ -0.21
SMG1-214ENST00000568038 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
SMG1-214ENST00000568038 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
SMG1-214ENST00000568038 RNF25Q96BH1 459 aaPredicted RBP13.72□□□□□ -0.21
SMG1-214ENST00000568038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.212e-8■■■■□ 19.6
SMG1-214ENST00000568038 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
SMG1-214ENST00000568038 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
SMG1-214ENST00000568038 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
SMG1-214ENST00000568038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.65□□□□□ -0.22
SMG1-214ENST00000568038 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
SMG1-214ENST00000568038 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
SMG1-214ENST00000568038 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
SMG1-214ENST00000568038 PKD2Q13563 968 aa13.63□□□□□ -0.23
SMG1-214ENST00000568038 EFCAB3Q8N7B9 438 aa13.63□□□□□ -0.23
SMG1-214ENST00000568038 SLAIN1Q8ND83 568 aa13.62□□□□□ -0.23
SMG1-214ENST00000568038 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
SMG1-214ENST00000568038 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
SMG1-214ENST00000568038 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
SMG1-214ENST00000568038 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
SMG1-214ENST00000568038 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
SMG1-214ENST00000568038 RGL2O15211 777 aa13.55□□□□□ -0.24
SMG1-214ENST00000568038 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
SMG1-214ENST00000568038 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms