RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
KARS-208ENST00000566772 DSG3P32926 999 aa11.74□□□□□ -0.53
KARS-208ENST00000566772 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
KARS-208ENST00000566772 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
KARS-208ENST00000566772 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
KARS-208ENST00000566772 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
KARS-208ENST00000566772 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
KARS-208ENST00000566772 GSE1Q14687 1217 aa11.65□□□□□ -0.54
KARS-208ENST00000566772 RIOK3O14730 519 aaKnown RBP11.61□□□□□ -0.55
KARS-208ENST00000566772 NUBP1P53384 320 aa11.6□□□□□ -0.55
KARS-208ENST00000566772 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
KARS-208ENST00000566772 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
KARS-208ENST00000566772 STK25O00506 426 aa11.55□□□□□ -0.56
KARS-208ENST00000566772 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
KARS-208ENST00000566772 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
KARS-208ENST00000566772 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
KARS-208ENST00000566772 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
KARS-208ENST00000566772 BCL11BQ9C0K0 894 aaPredicted RBP11.44□□□□□ -0.58
KARS-208ENST00000566772 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
KARS-208ENST00000566772 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
KARS-208ENST00000566772 ARXQ96QS3 562 aa11.43□□□□□ -0.58
KARS-208ENST00000566772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
KARS-208ENST00000566772 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
KARS-208ENST00000566772 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
KARS-208ENST00000566772 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
KARS-208ENST00000566772 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
KARS-208ENST00000566772 P3H3Q8IVL6 736 aa11.37□□□□□ -0.59
KARS-208ENST00000566772 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
KARS-208ENST00000566772 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
KARS-208ENST00000566772 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
KARS-208ENST00000566772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
KARS-208ENST00000566772 C14orf37Q86TY3 774 aa11.34□□□□□ -0.59
KARS-208ENST00000566772 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
KARS-208ENST00000566772 PYGBP11216 843 aa11.32□□□□□ -0.6
KARS-208ENST00000566772 CADPS2Q86UW7 1296 aa11.32□□□□□ -0.6
KARS-208ENST00000566772 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
KARS-208ENST00000566772 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
KARS-208ENST00000566772 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
KARS-208ENST00000566772 WDR70Q9NW82 654 aa11.3□□□□□ -0.6
KARS-208ENST00000566772 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
KARS-208ENST00000566772 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
KARS-208ENST00000566772 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
KARS-208ENST00000566772 BRPF1P55201 1214 aaPredicted RBP11.24□□□□□ -0.61
KARS-208ENST00000566772 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
KARS-208ENST00000566772 AKT1S1Q96B36 256 aa11.17□□□□□ -0.62
KARS-208ENST00000566772 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
KARS-208ENST00000566772 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
KARS-208ENST00000566772 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
KARS-208ENST00000566772 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
KARS-208ENST00000566772 HAX1O00165 279 aa11.1□□□□□ -0.63
KARS-208ENST00000566772 LHX8Q68G74 356 aa11.1□□□□□ -0.63
KARS-208ENST00000566772 ZNF467Q7Z7K2 595 aaPredicted RBP11.1□□□□□ -0.63
KARS-208ENST00000566772 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
KARS-208ENST00000566772 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
KARS-208ENST00000566772 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
KARS-208ENST00000566772 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
KARS-208ENST00000566772 SEMA3EO15041 775 aa11.07□□□□□ -0.64
KARS-208ENST00000566772 PCDHB8Q9UN66 801 aa11.07□□□□□ -0.64
KARS-208ENST00000566772 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
KARS-208ENST00000566772 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
KARS-208ENST00000566772 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
KARS-208ENST00000566772 PPP1R37O75864 691 aa11.05□□□□□ -0.64
KARS-208ENST00000566772 E2F4Q16254 413 aa11.05□□□□□ -0.64
KARS-208ENST00000566772 PSEN1P49768 467 aa11.02□□□□□ -0.65
KARS-208ENST00000566772 PITPNM1O00562 1244 aa10.97□□□□□ -0.65
KARS-208ENST00000566772 ZMYND10O75800 440 aa10.97□□□□□ -0.65
KARS-208ENST00000566772 FBXO22Q8NEZ5 403 aa10.96□□□□□ -0.65
KARS-208ENST00000566772 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
KARS-208ENST00000566772 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
KARS-208ENST00000566772 NLRP6P59044 892 aa10.93□□□□□ -0.66
KARS-208ENST00000566772 EFCAB3Q8N7B9 438 aa10.93□□□□□ -0.66
KARS-208ENST00000566772 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
KARS-208ENST00000566772 NCKAP5LQ9HCH0 1330 aa10.91□□□□□ -0.66
KARS-208ENST00000566772 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
KARS-208ENST00000566772 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
KARS-208ENST00000566772 BARGINQ6ZT62 677 aa10.89□□□□□ -0.67
KARS-208ENST00000566772 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
KARS-208ENST00000566772 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
KARS-208ENST00000566772 SOX12O15370 315 aa10.88□□□□□ -0.67
KARS-208ENST00000566772 CABP2Q9NPB3 220 aa10.88□□□□□ -0.67
KARS-208ENST00000566772 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
KARS-208ENST00000566772 IFNL1Q8IU54 200 aa10.86□□□□□ -0.67
KARS-208ENST00000566772 PDE4AP27815 886 aa10.84□□□□□ -0.67
KARS-208ENST00000566772 GPBP1L1Q9HC44 474 aaPredicted RBP10.84□□□□□ -0.67
KARS-208ENST00000566772 MFSD10Q14728 455 aa10.83□□□□□ -0.68
KARS-208ENST00000566772 AK7Q96M32 723 aa10.82□□□□□ -0.68
KARS-208ENST00000566772 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
KARS-208ENST00000566772 IL27Q8NEV9 243 aa10.81□□□□□ -0.68
KARS-208ENST00000566772 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
KARS-208ENST00000566772 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
KARS-208ENST00000566772 CRISPLD2Q9H0B8 497 aa10.79□□□□□ -0.68
KARS-208ENST00000566772 MAP3K13O43283 966 aa10.78□□□□□ -0.68
KARS-208ENST00000566772 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
KARS-208ENST00000566772 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
KARS-208ENST00000566772 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.69
KARS-208ENST00000566772 MS4A4AQ96JQ5 239 aa10.77□□□□□ -0.69
KARS-208ENST00000566772 ZMYND15Q9H091 742 aa10.77□□□□□ -0.69
KARS-208ENST00000566772 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
KARS-208ENST00000566772 GPIHBP1Q8IV16 184 aa10.75□□□□□ -0.69
KARS-208ENST00000566772 KIF12Q96FN5 646 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms