RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
PALB2-204ENST00000566069 MIER1Q8N108 512 aa12.81□□□□□ -0.36
PALB2-204ENST00000566069 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
PALB2-204ENST00000566069 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
PALB2-204ENST00000566069 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
PALB2-204ENST00000566069 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
PALB2-204ENST00000566069 TRPC6Q9Y210 931 aa12.74□□□□□ -0.37
PALB2-204ENST00000566069 C7P10643 843 aa12.73□□□□□ -0.37
PALB2-204ENST00000566069 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
PALB2-204ENST00000566069 SLC39A7Q92504 469 aa12.72□□□□□ -0.37
PALB2-204ENST00000566069 MAP3K13O43283 966 aa12.71□□□□□ -0.37
PALB2-204ENST00000566069 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
PALB2-204ENST00000566069 BMP2KQ9NSY1 1161 aaPredicted RBP12.67□□□□□ -0.38
PALB2-204ENST00000566069 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
PALB2-204ENST00000566069 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
PALB2-204ENST00000566069 NUBP1P53384 320 aa12.63□□□□□ -0.39
PALB2-204ENST00000566069 TIE1P35590 1138 aa12.61□□□□□ -0.39
PALB2-204ENST00000566069 FKBP8Q14318 412 aa12.61□□□□□ -0.39
PALB2-204ENST00000566069 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
PALB2-204ENST00000566069 POTEMA6NI47 508 aa12.54□□□□□ -0.4
PALB2-204ENST00000566069 SGIP1Q9BQI5 828 aa12.53□□□□□ -0.4
PALB2-204ENST00000566069 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
PALB2-204ENST00000566069 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
PALB2-204ENST00000566069 PLSCR2Q9NRY7 297 aa12.52□□□□□ -0.41
PALB2-204ENST00000566069 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
PALB2-204ENST00000566069 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
PALB2-204ENST00000566069 POTEGQ6S5H5 508 aa12.5□□□□□ -0.41
PALB2-204ENST00000566069 LCE2DQ5TA82 110 aaPredicted RBP12.49□□□□□ -0.41
PALB2-204ENST00000566069 IFNL1Q8IU54 200 aa12.49□□□□□ -0.41
PALB2-204ENST00000566069 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
PALB2-204ENST00000566069 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
PALB2-204ENST00000566069 FAM212AQ96EL1 285 aa12.43□□□□□ -0.42
PALB2-204ENST00000566069 SEC24BO95487 1268 aa12.41□□□□□ -0.42
PALB2-204ENST00000566069 IER5LQ5T953 404 aa12.4□□□□□ -0.42
PALB2-204ENST00000566069 FAM163AQ96GL9 167 aaPredicted RBP12.4□□□□□ -0.42
PALB2-204ENST00000566069 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
PALB2-204ENST00000566069 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
PALB2-204ENST00000566069 PYGBP11216 843 aa12.34□□□□□ -0.43
PALB2-204ENST00000566069 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
PALB2-204ENST00000566069 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
PALB2-204ENST00000566069 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
PALB2-204ENST00000566069 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
PALB2-204ENST00000566069 PLCG2P16885 1265 aa12.23□□□□□ -0.45
PALB2-204ENST00000566069 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
PALB2-204ENST00000566069 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
PALB2-204ENST00000566069 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
PALB2-204ENST00000566069 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
PALB2-204ENST00000566069 ST18O60284 1047 aa12.15□□□□□ -0.46
PALB2-204ENST00000566069 GSE1Q14687 1217 aa12.15□□□□□ -0.46
PALB2-204ENST00000566069 CHRM1P11229 460 aaPredicted RBP12.14□□□□□ -0.47
PALB2-204ENST00000566069 ZNF467Q7Z7K2 595 aaPredicted RBP12.1□□□□□ -0.47
PALB2-204ENST00000566069 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
PALB2-204ENST00000566069 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
PALB2-204ENST00000566069 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
PALB2-204ENST00000566069 PSEN1P49768 467 aa12.04□□□□□ -0.48
PALB2-204ENST00000566069 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.03□□□□□ -0.48
PALB2-204ENST00000566069 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
PALB2-204ENST00000566069 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
PALB2-204ENST00000566069 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
PALB2-204ENST00000566069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
PALB2-204ENST00000566069 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
PALB2-204ENST00000566069 PDAP1Q13442 181 aaKnown RBP11.96□□□□□ -0.49
PALB2-204ENST00000566069 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
PALB2-204ENST00000566069 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
PALB2-204ENST00000566069 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
PALB2-204ENST00000566069 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
PALB2-204ENST00000566069 SNPHO15079 494 aa11.94□□□□□ -0.5
PALB2-204ENST00000566069 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
PALB2-204ENST00000566069 C3orf67Q6ZVT6 689 aa11.9□□□□□ -0.5
PALB2-204ENST00000566069 CABP2Q9NPB3 220 aa11.9□□□□□ -0.5
PALB2-204ENST00000566069 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
PALB2-204ENST00000566069 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
PALB2-204ENST00000566069 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
PALB2-204ENST00000566069 MMRN1Q13201 1228 aa11.8□□□□□ -0.52
PALB2-204ENST00000566069 BOLA1Q9Y3E2 137 aa11.8□□□□□ -0.52
PALB2-204ENST00000566069 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
PALB2-204ENST00000566069 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
PALB2-204ENST00000566069 EMP3P54852 163 aa11.76□□□□□ -0.53
PALB2-204ENST00000566069 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
PALB2-204ENST00000566069 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
PALB2-204ENST00000566069 KRTAP3-3Q9BYR6 98 aa11.73□□□□□ -0.53
PALB2-204ENST00000566069 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
PALB2-204ENST00000566069 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
PALB2-204ENST00000566069 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
PALB2-204ENST00000566069 G3V3G9 751 aa11.69□□□□□ -0.54
PALB2-204ENST00000566069 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
PALB2-204ENST00000566069 HOXB1P14653 301 aaPredicted RBP11.65□□□□□ -0.54
PALB2-204ENST00000566069 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
PALB2-204ENST00000566069 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
PALB2-204ENST00000566069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
PALB2-204ENST00000566069 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
PALB2-204ENST00000566069 ZFP91Q96JP5 570 aaPredicted RBP11.63□□□□□ -0.55
PALB2-204ENST00000566069 SOX12O15370 315 aa11.61□□□□□ -0.55
PALB2-204ENST00000566069 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
PALB2-204ENST00000566069 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
PALB2-204ENST00000566069 ZNF710Q8N1W2 664 aa11.58□□□□□ -0.56
PALB2-204ENST00000566069 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
PALB2-204ENST00000566069 ERBB3P21860 1342 aa11.54□□□□□ -0.56
PALB2-204ENST00000566069 GPR153Q6NV75 609 aa11.52□□□□□ -0.57
PALB2-204ENST00000566069 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms