RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
CCNDBP1-207ENST00000565958 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
CCNDBP1-207ENST00000565958 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
CCNDBP1-207ENST00000565958 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
CCNDBP1-207ENST00000565958 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
CCNDBP1-207ENST00000565958 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
CCNDBP1-207ENST00000565958 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
CCNDBP1-207ENST00000565958 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
CCNDBP1-207ENST00000565958 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
CCNDBP1-207ENST00000565958 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
CCNDBP1-207ENST00000565958 PROM2Q8N271 834 aa13.06□□□□□ -0.32
CCNDBP1-207ENST00000565958 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
CCNDBP1-207ENST00000565958 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
CCNDBP1-207ENST00000565958 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
CCNDBP1-207ENST00000565958 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
CCNDBP1-207ENST00000565958 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
CCNDBP1-207ENST00000565958 TIE1P35590 1138 aa12.95□□□□□ -0.34
CCNDBP1-207ENST00000565958 LCE2DQ5TA82 110 aaPredicted RBP12.95□□□□□ -0.34
CCNDBP1-207ENST00000565958 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
CCNDBP1-207ENST00000565958 MAP3K13O43283 966 aa12.93□□□□□ -0.34
CCNDBP1-207ENST00000565958 MIER1Q8N108 512 aa12.91□□□□□ -0.34
CCNDBP1-207ENST00000565958 TRPC6Q9Y210 931 aa12.91□□□□□ -0.34
CCNDBP1-207ENST00000565958 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
CCNDBP1-207ENST00000565958 SEC24BO95487 1268 aa12.86□□□□□ -0.35
CCNDBP1-207ENST00000565958 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
CCNDBP1-207ENST00000565958 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-207ENST00000565958 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
CCNDBP1-207ENST00000565958 IER5LQ5T953 404 aa12.81□□□□□ -0.36
CCNDBP1-207ENST00000565958 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
CCNDBP1-207ENST00000565958 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
CCNDBP1-207ENST00000565958 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
CCNDBP1-207ENST00000565958 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
CCNDBP1-207ENST00000565958 CDAN1Q8IWY9 1227 aa12.71□□□□□ -0.37
CCNDBP1-207ENST00000565958 NUBP1P53384 320 aa12.67□□□□□ -0.38
CCNDBP1-207ENST00000565958 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
CCNDBP1-207ENST00000565958 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
CCNDBP1-207ENST00000565958 TMEM106CQ9BVX2 250 aa12.64□□□□□ -0.39
CCNDBP1-207ENST00000565958 PLCG2P16885 1265 aa12.63□□□□□ -0.39
CCNDBP1-207ENST00000565958 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
CCNDBP1-207ENST00000565958 ST18O60284 1047 aa12.62□□□□□ -0.39
CCNDBP1-207ENST00000565958 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
CCNDBP1-207ENST00000565958 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
CCNDBP1-207ENST00000565958 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
CCNDBP1-207ENST00000565958 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
CCNDBP1-207ENST00000565958 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
CCNDBP1-207ENST00000565958 SNPHO15079 494 aa12.49□□□□□ -0.41
CCNDBP1-207ENST00000565958 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
CCNDBP1-207ENST00000565958 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
CCNDBP1-207ENST00000565958 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
CCNDBP1-207ENST00000565958 FKBP8Q14318 412 aa12.44□□□□□ -0.42
CCNDBP1-207ENST00000565958 PYGBP11216 843 aa12.43□□□□□ -0.42
CCNDBP1-207ENST00000565958 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
CCNDBP1-207ENST00000565958 SPNS2Q8IVW8 549 aa12.41□□□□□ -0.42
CCNDBP1-207ENST00000565958 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
CCNDBP1-207ENST00000565958 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
CCNDBP1-207ENST00000565958 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
CCNDBP1-207ENST00000565958 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
CCNDBP1-207ENST00000565958 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
CCNDBP1-207ENST00000565958 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
CCNDBP1-207ENST00000565958 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
CCNDBP1-207ENST00000565958 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
CCNDBP1-207ENST00000565958 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
CCNDBP1-207ENST00000565958 EMP3P54852 163 aa12.26□□□□□ -0.45
CCNDBP1-207ENST00000565958 GSE1Q14687 1217 aa12.26□□□□□ -0.45
CCNDBP1-207ENST00000565958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCNDBP1-207ENST00000565958 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.45
CCNDBP1-207ENST00000565958 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
CCNDBP1-207ENST00000565958 PSEN1P49768 467 aa12.17□□□□□ -0.46
CCNDBP1-207ENST00000565958 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
CCNDBP1-207ENST00000565958 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
CCNDBP1-207ENST00000565958 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
CCNDBP1-207ENST00000565958 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
CCNDBP1-207ENST00000565958 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
CCNDBP1-207ENST00000565958 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
CCNDBP1-207ENST00000565958 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
CCNDBP1-207ENST00000565958 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
CCNDBP1-207ENST00000565958 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
CCNDBP1-207ENST00000565958 G3V3G9 751 aa12.07□□□□□ -0.48
CCNDBP1-207ENST00000565958 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
CCNDBP1-207ENST00000565958 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
CCNDBP1-207ENST00000565958 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.49
CCNDBP1-207ENST00000565958 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
CCNDBP1-207ENST00000565958 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
CCNDBP1-207ENST00000565958 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
CCNDBP1-207ENST00000565958 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
CCNDBP1-207ENST00000565958 ERBB3P21860 1342 aa11.95□□□□□ -0.5
CCNDBP1-207ENST00000565958 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
CCNDBP1-207ENST00000565958 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
CCNDBP1-207ENST00000565958 SPOCK2Q92563 424 aa11.92□□□□□ -0.5
CCNDBP1-207ENST00000565958 RNF166Q96A37 237 aaPredicted RBP11.88□□□□□ -0.51
CCNDBP1-207ENST00000565958 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
CCNDBP1-207ENST00000565958 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
CCNDBP1-207ENST00000565958 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
CCNDBP1-207ENST00000565958 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
CCNDBP1-207ENST00000565958 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
CCNDBP1-207ENST00000565958 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
CCNDBP1-207ENST00000565958 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
CCNDBP1-207ENST00000565958 MICALL2Q8IY33 904 aa11.77□□□□□ -0.53
CCNDBP1-207ENST00000565958 PTGER2P43116 358 aa11.75□□□□□ -0.53
CCNDBP1-207ENST00000565958 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms