RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 CHGAP10645 457 aaKnown RBP15.35■□□□□ 0.05
KARS-205ENST00000565738 RNF25Q96BH1 459 aaPredicted RBP15.31■□□□□ 0.04
KARS-205ENST00000565738 PAXIP1Q6ZW49 1069 aaPredicted RBP15.28■□□□□ 0.04
KARS-205ENST00000565738 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
KARS-205ENST00000565738 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
KARS-205ENST00000565738 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
KARS-205ENST00000565738 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
KARS-205ENST00000565738 PYGBP11216 843 aa15.23■□□□□ 0.03
KARS-205ENST00000565738 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
KARS-205ENST00000565738 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
KARS-205ENST00000565738 HS6ST3Q8IZP7 471 aa15.19■□□□□ 0.02
KARS-205ENST00000565738 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
KARS-205ENST00000565738 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
KARS-205ENST00000565738 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
KARS-205ENST00000565738 SPRYD3Q8NCJ5 442 aa15.16■□□□□ 0.02
KARS-205ENST00000565738 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
KARS-205ENST00000565738 STK25O00506 426 aa15.11■□□□□ 0.01
KARS-205ENST00000565738 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
KARS-205ENST00000565738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.05■□□□□ -0
KARS-205ENST00000565738 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ -0
KARS-205ENST00000565738 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
KARS-205ENST00000565738 STK24Q9Y6E0 443 aa15.03■□□□□ -0
KARS-205ENST00000565738 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
KARS-205ENST00000565738 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
KARS-205ENST00000565738 CCDC61Q9Y6R9 512 aa15□□□□□ -0.01
KARS-205ENST00000565738 NKX1-1Q15270 411 aaPredicted RBP14.99□□□□□ -0.01
KARS-205ENST00000565738 DNAJC5Q9H3Z4 198 aa14.99□□□□□ -0.01
KARS-205ENST00000565738 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
KARS-205ENST00000565738 ZNF467Q7Z7K2 595 aaPredicted RBP14.98□□□□□ -0.01
KARS-205ENST00000565738 SGIP1Q9BQI5 828 aa14.97□□□□□ -0.01
KARS-205ENST00000565738 PCDHB8Q9UN66 801 aa14.96□□□□□ -0.01
KARS-205ENST00000565738 PCDHB13Q9Y5F0 798 aa14.96□□□□□ -0.01
KARS-205ENST00000565738 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
KARS-205ENST00000565738 PDAP1Q13442 181 aaKnown RBP14.89□□□□□ -0.03
KARS-205ENST00000565738 GTPBP6O43824 516 aaPredicted RBP14.88□□□□□ -0.03
KARS-205ENST00000565738 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
KARS-205ENST00000565738 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
KARS-205ENST00000565738 ZNF579Q8NAF0 562 aaKnown RBP14.86□□□□□ -0.03
KARS-205ENST00000565738 MAP3K13O43283 966 aa14.84□□□□□ -0.03
KARS-205ENST00000565738 PSEN1P49768 467 aa14.83□□□□□ -0.04
KARS-205ENST00000565738 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
KARS-205ENST00000565738 KIF12Q96FN5 646 aa14.82□□□□□ -0.04
KARS-205ENST00000565738 PHF12Q96QT6 1004 aa14.79□□□□□ -0.04
KARS-205ENST00000565738 RYDENQ9NUL5 291 aaKnown RBP14.78□□□□□ -0.04
KARS-205ENST00000565738 BCANQ96GW7 911 aa14.76□□□□□ -0.05
KARS-205ENST00000565738 CABP2Q9NPB3 220 aa14.68□□□□□ -0.06
KARS-205ENST00000565738 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
KARS-205ENST00000565738 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
KARS-205ENST00000565738 MFRPQ9BY79 579 aa14.63□□□□□ -0.07
KARS-205ENST00000565738 MS4A3Q96HJ5 214 aa14.61□□□□□ -0.07
KARS-205ENST00000565738 TMEM106CQ9BVX2 250 aa14.56□□□□□ -0.08
KARS-205ENST00000565738 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
KARS-205ENST00000565738 TRPC6Q9Y210 931 aa14.55□□□□□ -0.08
KARS-205ENST00000565738 NLRP6P59044 892 aa14.54□□□□□ -0.08
KARS-205ENST00000565738 GOLGA2Q08379 1002 aa14.54□□□□□ -0.08
KARS-205ENST00000565738 HAX1O00165 279 aa14.53□□□□□ -0.08
KARS-205ENST00000565738 SOX12O15370 315 aa14.53□□□□□ -0.08
KARS-205ENST00000565738 CADPS2Q86UW7 1296 aa14.5□□□□□ -0.09
KARS-205ENST00000565738 FBXO22Q8NEZ5 403 aa14.5□□□□□ -0.09
KARS-205ENST00000565738 PPP1R37O75864 691 aa14.49□□□□□ -0.09
KARS-205ENST00000565738 NBR1Q14596 966 aa14.49□□□□□ -0.09
KARS-205ENST00000565738 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
KARS-205ENST00000565738 GALR2O43603 387 aaPredicted RBP14.42□□□□□ -0.1
KARS-205ENST00000565738 WDR70Q9NW82 654 aa14.42□□□□□ -0.1
KARS-205ENST00000565738 TIE1P35590 1138 aa14.41□□□□□ -0.1
KARS-205ENST00000565738 EVX2Q03828 476 aa14.41□□□□□ -0.1
KARS-205ENST00000565738 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
KARS-205ENST00000565738 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
KARS-205ENST00000565738 MS4A4AQ96JQ5 239 aa14.39□□□□□ -0.11
KARS-205ENST00000565738 BMP2KQ9NSY1 1161 aaPredicted RBP14.38□□□□□ -0.11
KARS-205ENST00000565738 TPRNQ4KMQ1 711 aa14.33□□□□□ -0.12
KARS-205ENST00000565738 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.12
KARS-205ENST00000565738 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
KARS-205ENST00000565738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.125e-7■■□□□ 12.8
KARS-205ENST00000565738 CLCN6P51797 869 aa14.27□□□□□ -0.13
KARS-205ENST00000565738 KCNV2Q8TDN2 545 aa14.27□□□□□ -0.13
KARS-205ENST00000565738 ATN1P54259 1190 aaPredicted RBP14.23□□□□□ -0.13
KARS-205ENST00000565738 NCKAP5LQ9HCH0 1330 aa14.21□□□□□ -0.13
KARS-205ENST00000565738 LARP6Q9BRS8 491 aaKnown RBP14.21□□□□□ -0.13
KARS-205ENST00000565738 ATMINO43313 823 aaPredicted RBP14.19□□□□□ -0.14
KARS-205ENST00000565738 PDE4AP27815 886 aa14.19□□□□□ -0.14
KARS-205ENST00000565738 DPY19L2Q6NUT2 758 aa14.18□□□□□ -0.14
KARS-205ENST00000565738 E2F4Q16254 413 aa14.17□□□□□ -0.14
KARS-205ENST00000565738 ILDR1Q86SU0 546 aaPredicted RBP14.17□□□□□ -0.14
KARS-205ENST00000565738 GABBR2O75899 941 aa14.15□□□□□ -0.14
KARS-205ENST00000565738 ASTLQ6HA08 431 aaPredicted RBP14.14□□□□□ -0.15
KARS-205ENST00000565738 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
KARS-205ENST00000565738 POTEHQ6S545 545 aa14.13□□□□□ -0.15
KARS-205ENST00000565738 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
KARS-205ENST00000565738 PDCD7Q8N8D1 485 aaKnown RBP14.11□□□□□ -0.15
KARS-205ENST00000565738 MFSD10Q14728 455 aa14.1□□□□□ -0.15
KARS-205ENST00000565738 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
KARS-205ENST00000565738 IER5LQ5T953 404 aa14.09□□□□□ -0.15
KARS-205ENST00000565738 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
KARS-205ENST00000565738 ARHGEF1Q92888 912 aaKnown RBP14.08□□□□□ -0.16
KARS-205ENST00000565738 DCBLD2Q96PD2 775 aa14.08□□□□□ -0.16
KARS-205ENST00000565738 OCEL1Q9H607 264 aa14.08□□□□□ -0.16
KARS-205ENST00000565738 PLCG2P16885 1265 aa14.07□□□□□ -0.16
KARS-205ENST00000565738 G3V3G9 751 aa14.05□□□□□ -0.16
KARS-205ENST00000565738 PPP1R15BQ5SWA1 713 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms