RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
SCAPER-213ENST00000564757 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
SCAPER-213ENST00000564757 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
SCAPER-213ENST00000564757 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
SCAPER-213ENST00000564757 C7P10643 843 aa10.81□□□□□ -0.68
SCAPER-213ENST00000564757 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
SCAPER-213ENST00000564757 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
SCAPER-213ENST00000564757 ATN1P54259 1190 aaPredicted RBP10.8□□□□□ -0.68
SCAPER-213ENST00000564757 MIER1Q8N108 512 aa10.8□□□□□ -0.68
SCAPER-213ENST00000564757 POTEJP0CG39 1038 aa10.78□□□□□ -0.68
SCAPER-213ENST00000564757 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
SCAPER-213ENST00000564757 POTEMA6NI47 508 aa10.76□□□□□ -0.69
SCAPER-213ENST00000564757 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
SCAPER-213ENST00000564757 MAP3K13O43283 966 aa10.75□□□□□ -0.69
SCAPER-213ENST00000564757 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
SCAPER-213ENST00000564757 POTEGQ6S5H5 508 aa10.72□□□□□ -0.69
SCAPER-213ENST00000564757 MAMSTRQ6ZN01 415 aa10.71□□□□□ -0.69
SCAPER-213ENST00000564757 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
SCAPER-213ENST00000564757 TIE1P35590 1138 aa10.7□□□□□ -0.7
SCAPER-213ENST00000564757 POTEFA5A3E0 1075 aa10.69□□□□□ -0.7
SCAPER-213ENST00000564757 SCUBE2Q9NQ36 999 aa10.67□□□□□ -0.7
SCAPER-213ENST00000564757 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
SCAPER-213ENST00000564757 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
SCAPER-213ENST00000564757 NUBP1P53384 320 aa10.61□□□□□ -0.71
SCAPER-213ENST00000564757 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
SCAPER-213ENST00000564757 LCE2DQ5TA82 110 aaPredicted RBP10.6□□□□□ -0.71
SCAPER-213ENST00000564757 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
SCAPER-213ENST00000564757 SGIP1Q9BQI5 828 aa10.59□□□□□ -0.71
SCAPER-213ENST00000564757 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
SCAPER-213ENST00000564757 SEC24BO95487 1268 aa10.58□□□□□ -0.72
SCAPER-213ENST00000564757 FAM163AQ96GL9 167 aaPredicted RBP10.58□□□□□ -0.72
SCAPER-213ENST00000564757 FKBP8Q14318 412 aa10.57□□□□□ -0.72
SCAPER-213ENST00000564757 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
SCAPER-213ENST00000564757 FAM212AQ96EL1 285 aa10.55□□□□□ -0.72
SCAPER-213ENST00000564757 PCDH10Q9P2E7 1040 aa10.54□□□□□ -0.72
SCAPER-213ENST00000564757 IER5LQ5T953 404 aa10.53□□□□□ -0.72
SCAPER-213ENST00000564757 TMEM106CQ9BVX2 250 aa10.5□□□□□ -0.73
SCAPER-213ENST00000564757 PYGBP11216 843 aa10.43□□□□□ -0.74
SCAPER-213ENST00000564757 PLCG2P16885 1265 aa10.43□□□□□ -0.74
SCAPER-213ENST00000564757 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
SCAPER-213ENST00000564757 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
SCAPER-213ENST00000564757 IRX5P78411 483 aaPredicted RBP10.41□□□□□ -0.74
SCAPER-213ENST00000564757 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
SCAPER-213ENST00000564757 PCDHB8Q9UN66 801 aa10.37□□□□□ -0.75
SCAPER-213ENST00000564757 ST18O60284 1047 aa10.34□□□□□ -0.75
SCAPER-213ENST00000564757 CDAN1Q8IWY9 1227 aa10.34□□□□□ -0.75
SCAPER-213ENST00000564757 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
SCAPER-213ENST00000564757 VASPP50552 380 aaPredicted RBP10.29□□□□□ -0.76
SCAPER-213ENST00000564757 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
SCAPER-213ENST00000564757 GSE1Q14687 1217 aa10.27□□□□□ -0.77
SCAPER-213ENST00000564757 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
SCAPER-213ENST00000564757 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
SCAPER-213ENST00000564757 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
SCAPER-213ENST00000564757 GOLGA2Q08379 1002 aa10.22□□□□□ -0.77
SCAPER-213ENST00000564757 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
SCAPER-213ENST00000564757 SNPHO15079 494 aa10.2□□□□□ -0.78
SCAPER-213ENST00000564757 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
SCAPER-213ENST00000564757 CHRM1P11229 460 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-213ENST00000564757 PSEN1P49768 467 aa10.18□□□□□ -0.78
SCAPER-213ENST00000564757 C3orf67Q6ZVT6 689 aa10.18□□□□□ -0.78
SCAPER-213ENST00000564757 MARVELD3Q96A59 401 aa10.17□□□□□ -0.78
SCAPER-213ENST00000564757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.784e-7■■■□□ 18.1
SCAPER-213ENST00000564757 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
SCAPER-213ENST00000564757 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
SCAPER-213ENST00000564757 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
SCAPER-213ENST00000564757 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
SCAPER-213ENST00000564757 CIZ1Q9ULV3 898 aaPredicted RBP10.09□□□□□ -0.79
SCAPER-213ENST00000564757 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
SCAPER-213ENST00000564757 ILDR1Q86SU0 546 aaPredicted RBP10.08□□□□□ -0.8
SCAPER-213ENST00000564757 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
SCAPER-213ENST00000564757 EMP3P54852 163 aa10.07□□□□□ -0.8
SCAPER-213ENST00000564757 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
SCAPER-213ENST00000564757 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
SCAPER-213ENST00000564757 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
SCAPER-213ENST00000564757 BOLA1Q9Y3E2 137 aa10.01□□□□□ -0.81
SCAPER-213ENST00000564757 POTEB3A0JP26 581 aa10□□□□□ -0.81
SCAPER-213ENST00000564757 FAM205CA6NFA0 338 aa10□□□□□ -0.81
SCAPER-213ENST00000564757 G3V3G9 751 aa10□□□□□ -0.81
SCAPER-213ENST00000564757 POTEBQ6S5H4 581 aa10□□□□□ -0.81
SCAPER-213ENST00000564757 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
SCAPER-213ENST00000564757 KRTAP3-2Q9BYR7 98 aa9.98□□□□□ -0.81
SCAPER-213ENST00000564757 HOXB3P14651 431 aaPredicted RBP9.95□□□□□ -0.82
SCAPER-213ENST00000564757 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
SCAPER-213ENST00000564757 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
SCAPER-213ENST00000564757 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
SCAPER-213ENST00000564757 HOXB1P14653 301 aaPredicted RBP9.88□□□□□ -0.83
SCAPER-213ENST00000564757 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
SCAPER-213ENST00000564757 MICALL2Q8IY33 904 aa9.84□□□□□ -0.83
SCAPER-213ENST00000564757 ERBB3P21860 1342 aa9.83□□□□□ -0.84
SCAPER-213ENST00000564757 TMEM92Q6UXU6 159 aa9.83□□□□□ -0.84
SCAPER-213ENST00000564757 RIMBP2O15034 1052 aa9.81□□□□□ -0.84
SCAPER-213ENST00000564757 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
SCAPER-213ENST00000564757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.8□□□□□ -0.84
SCAPER-213ENST00000564757 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
SCAPER-213ENST00000564757 ZFP91Q96JP5 570 aaPredicted RBP9.8□□□□□ -0.84
SCAPER-213ENST00000564757 SOX12O15370 315 aa9.79□□□□□ -0.84
SCAPER-213ENST00000564757 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
SCAPER-213ENST00000564757 VARS2Q5ST30 1063 aaKnown RBP9.78□□□□□ -0.84
SCAPER-213ENST00000564757 PHF8Q9UPP1 1060 aa9.78□□□□□ -0.84
SCAPER-213ENST00000564757 VGFO15240 615 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms