RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 BBXQ8WY36 941 aaPredicted RBP11.75□□□□□ -0.53
CDH1-207ENST00000564745 HAX1O00165 279 aa11.73□□□□□ -0.53
CDH1-207ENST00000564745 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
CDH1-207ENST00000564745 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
CDH1-207ENST00000564745 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
CDH1-207ENST00000564745 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDH1-207ENST00000564745 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
CDH1-207ENST00000564745 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
CDH1-207ENST00000564745 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
CDH1-207ENST00000564745 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
CDH1-207ENST00000564745 RIOK3O14730 519 aaKnown RBP11.61□□□□□ -0.55
CDH1-207ENST00000564745 PYGBP11216 843 aa11.6□□□□□ -0.55
CDH1-207ENST00000564745 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
CDH1-207ENST00000564745 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
CDH1-207ENST00000564745 SPRYD3Q8NCJ5 442 aa11.58□□□□□ -0.56
CDH1-207ENST00000564745 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
CDH1-207ENST00000564745 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
CDH1-207ENST00000564745 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
CDH1-207ENST00000564745 EVX2Q03828 476 aa11.54□□□□□ -0.56
CDH1-207ENST00000564745 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
CDH1-207ENST00000564745 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
CDH1-207ENST00000564745 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
CDH1-207ENST00000564745 TSHZ2Q9NRE2 1034 aa11.53□□□□□ -0.56
CDH1-207ENST00000564745 STK25O00506 426 aa11.5□□□□□ -0.57
CDH1-207ENST00000564745 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
CDH1-207ENST00000564745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
CDH1-207ENST00000564745 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
CDH1-207ENST00000564745 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
CDH1-207ENST00000564745 TAOK2Q9UL54 1235 aa11.47□□□□□ -0.57
CDH1-207ENST00000564745 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
CDH1-207ENST00000564745 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
CDH1-207ENST00000564745 SGIP1Q9BQI5 828 aa11.43□□□□□ -0.58
CDH1-207ENST00000564745 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
CDH1-207ENST00000564745 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
CDH1-207ENST00000564745 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
CDH1-207ENST00000564745 PCDHB13Q9Y5F0 798 aa11.41□□□□□ -0.58
CDH1-207ENST00000564745 LHX8Q68G74 356 aa11.36□□□□□ -0.59
CDH1-207ENST00000564745 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
CDH1-207ENST00000564745 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
CDH1-207ENST00000564745 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
CDH1-207ENST00000564745 BCANQ96GW7 911 aa11.31□□□□□ -0.6
CDH1-207ENST00000564745 MAP3K13O43283 966 aa11.3□□□□□ -0.6
CDH1-207ENST00000564745 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
CDH1-207ENST00000564745 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
CDH1-207ENST00000564745 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
CDH1-207ENST00000564745 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
CDH1-207ENST00000564745 GABBR2O75899 941 aa11.28□□□□□ -0.6
CDH1-207ENST00000564745 PSEN1P49768 467 aa11.28□□□□□ -0.6
CDH1-207ENST00000564745 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
CDH1-207ENST00000564745 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
CDH1-207ENST00000564745 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
CDH1-207ENST00000564745 MFRPQ9BY79 579 aa11.2□□□□□ -0.62
CDH1-207ENST00000564745 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
CDH1-207ENST00000564745 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
CDH1-207ENST00000564745 EFCAB3Q8N7B9 438 aa11.16□□□□□ -0.62
CDH1-207ENST00000564745 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
CDH1-207ENST00000564745 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
CDH1-207ENST00000564745 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
CDH1-207ENST00000564745 PPP1R37O75864 691 aa11.11□□□□□ -0.63
CDH1-207ENST00000564745 MS4A3Q96HJ5 214 aa11.11□□□□□ -0.63
CDH1-207ENST00000564745 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
CDH1-207ENST00000564745 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
CDH1-207ENST00000564745 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
CDH1-207ENST00000564745 CLCN6P51797 869 aa11.08□□□□□ -0.64
CDH1-207ENST00000564745 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
CDH1-207ENST00000564745 SOX12O15370 315 aa11.04□□□□□ -0.64
CDH1-207ENST00000564745 POTEIP0CG38 1075 aa11.04□□□□□ -0.64
CDH1-207ENST00000564745 NLRP6P59044 892 aa11.04□□□□□ -0.64
CDH1-207ENST00000564745 NBR1Q14596 966 aa11.03□□□□□ -0.64
CDH1-207ENST00000564745 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.65
CDH1-207ENST00000564745 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.65
CDH1-207ENST00000564745 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
CDH1-207ENST00000564745 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
CDH1-207ENST00000564745 GOLGA2Q08379 1002 aa10.96□□□□□ -0.65
CDH1-207ENST00000564745 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
CDH1-207ENST00000564745 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
CDH1-207ENST00000564745 WDR70Q9NW82 654 aa10.94□□□□□ -0.66
CDH1-207ENST00000564745 TIE1P35590 1138 aa10.93□□□□□ -0.66
CDH1-207ENST00000564745 MKRN3Q13064 507 aaKnown RBP10.92□□□□□ -0.66
CDH1-207ENST00000564745 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
CDH1-207ENST00000564745 P3H3Q8IVL6 736 aa10.88□□□□□ -0.67
CDH1-207ENST00000564745 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
CDH1-207ENST00000564745 TRIM35Q9UPQ4 493 aa10.88□□□□□ -0.67
CDH1-207ENST00000564745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDH1-207ENST00000564745 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
CDH1-207ENST00000564745 DPY19L2Q6NUT2 758 aa10.84□□□□□ -0.67
CDH1-207ENST00000564745 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
CDH1-207ENST00000564745 ATN1P54259 1190 aaPredicted RBP10.83□□□□□ -0.68
CDH1-207ENST00000564745 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
CDH1-207ENST00000564745 E2F4Q16254 413 aa10.81□□□□□ -0.68
CDH1-207ENST00000564745 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
CDH1-207ENST00000564745 PDE4AP27815 886 aa10.79□□□□□ -0.68
CDH1-207ENST00000564745 MFSD10Q14728 455 aa10.78□□□□□ -0.68
CDH1-207ENST00000564745 PDCD7Q8N8D1 485 aaKnown RBP10.77□□□□□ -0.69
CDH1-207ENST00000564745 ARHGEF1Q92888 912 aaKnown RBP10.76□□□□□ -0.69
CDH1-207ENST00000564745 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
CDH1-207ENST00000564745 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
CDH1-207ENST00000564745 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
CDH1-207ENST00000564745 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
CDH1-207ENST00000564745 POTEMA6NI47 508 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms