RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
UBR1-205ENST00000564540 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
UBR1-205ENST00000564540 POTEMA6NI47 508 aa15.1■□□□□ 0.01
UBR1-205ENST00000564540 ASTLQ6HA08 431 aaPredicted RBP15.09■□□□□ 0.01
UBR1-205ENST00000564540 PLEKHG5O94827 1062 aa15.07■□□□□ 0
UBR1-205ENST00000564540 POTEGQ6S5H5 508 aa15.04■□□□□ -0
UBR1-205ENST00000564540 ATMINO43313 823 aaPredicted RBP15.02■□□□□ -0
UBR1-205ENST00000564540 C7P10643 843 aa15.02■□□□□ -0
UBR1-205ENST00000564540 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
UBR1-205ENST00000564540 METRNQ9UJH8 293 aa15.02■□□□□ -0
UBR1-205ENST00000564540 SLC39A7Q92504 469 aa15.01□□□□□ -0.01
UBR1-205ENST00000564540 PCDH10Q9P2E7 1040 aa14.98□□□□□ -0.01
UBR1-205ENST00000564540 POTEJP0CG39 1038 aa14.97□□□□□ -0.01
UBR1-205ENST00000564540 MAMSTRQ6ZN01 415 aa14.95□□□□□ -0.02
UBR1-205ENST00000564540 IFNLR1Q8IU57 520 aaPredicted RBP14.95□□□□□ -0.02
UBR1-205ENST00000564540 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
UBR1-205ENST00000564540 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
UBR1-205ENST00000564540 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
UBR1-205ENST00000564540 NUBP1P53384 320 aa14.84□□□□□ -0.03
UBR1-205ENST00000564540 RASEFQ8IZ41 740 aa14.84□□□□□ -0.03
UBR1-205ENST00000564540 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
UBR1-205ENST00000564540 LCE2DQ5TA82 110 aaPredicted RBP14.83□□□□□ -0.04
UBR1-205ENST00000564540 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
UBR1-205ENST00000564540 KIF12Q96FN5 646 aa14.81□□□□□ -0.04
UBR1-205ENST00000564540 SCUBE2Q9NQ36 999 aa14.79□□□□□ -0.04
UBR1-205ENST00000564540 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
UBR1-205ENST00000564540 POTEFA5A3E0 1075 aa14.75□□□□□ -0.05
UBR1-205ENST00000564540 BMP2KQ9NSY1 1161 aaPredicted RBP14.74□□□□□ -0.05
UBR1-205ENST00000564540 TIE1P35590 1138 aa14.7□□□□□ -0.06
UBR1-205ENST00000564540 FAM163AQ96GL9 167 aaPredicted RBP14.7□□□□□ -0.06
UBR1-205ENST00000564540 FAM212AQ96EL1 285 aa14.69□□□□□ -0.06
UBR1-205ENST00000564540 TRPC6Q9Y210 931 aa14.68□□□□□ -0.06
UBR1-205ENST00000564540 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
UBR1-205ENST00000564540 MAP3K13O43283 966 aa14.65□□□□□ -0.06
UBR1-205ENST00000564540 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
UBR1-205ENST00000564540 TTLL13PA6NNM8 815 aa14.58□□□□□ -0.08
UBR1-205ENST00000564540 GSE1Q14687 1217 aa14.58□□□□□ -0.08
UBR1-205ENST00000564540 COLQQ9Y215 455 aaPredicted RBP14.58□□□□□ -0.08
UBR1-205ENST00000564540 IER5LQ5T953 404 aa14.55□□□□□ -0.08
UBR1-205ENST00000564540 SGIP1Q9BQI5 828 aa14.54□□□□□ -0.08
UBR1-205ENST00000564540 SEC24BO95487 1268 aa14.53□□□□□ -0.08
UBR1-205ENST00000564540 PYGBP11216 843 aa14.53□□□□□ -0.08
UBR1-205ENST00000564540 TRIM35Q9UPQ4 493 aa14.47□□□□□ -0.09
UBR1-205ENST00000564540 CDAN1Q8IWY9 1227 aa14.44□□□□□ -0.1
UBR1-205ENST00000564540 PCDHB13Q9Y5F0 798 aa14.44□□□□□ -0.1
UBR1-205ENST00000564540 CHRM1P11229 460 aaPredicted RBP14.4□□□□□ -0.1
UBR1-205ENST00000564540 IFNL1Q8IU54 200 aa14.4□□□□□ -0.1
UBR1-205ENST00000564540 PKD2Q13563 968 aa14.38□□□□□ -0.11
UBR1-205ENST00000564540 PCDHB8Q9UN66 801 aa14.36□□□□□ -0.11
UBR1-205ENST00000564540 SLAIN1Q8ND83 568 aa14.35□□□□□ -0.11
UBR1-205ENST00000564540 ST18O60284 1047 aa14.34□□□□□ -0.11
UBR1-205ENST00000564540 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
UBR1-205ENST00000564540 ECM2O94769 699 aaPredicted RBP14.3□□□□□ -0.12
UBR1-205ENST00000564540 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
UBR1-205ENST00000564540 PLCG2P16885 1265 aa14.28□□□□□ -0.12
UBR1-205ENST00000564540 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
UBR1-205ENST00000564540 ZNF467Q7Z7K2 595 aaPredicted RBP14.27□□□□□ -0.13
UBR1-205ENST00000564540 RNF25Q96BH1 459 aaPredicted RBP14.27□□□□□ -0.13
UBR1-205ENST00000564540 TMEM121BQ9BXQ6 578 aaPredicted RBP14.23□□□□□ -0.13
UBR1-205ENST00000564540 RGL2O15211 777 aa14.2□□□□□ -0.14
UBR1-205ENST00000564540 RIOK3O14730 519 aaKnown RBP14.19□□□□□ -0.14
UBR1-205ENST00000564540 OCEL1Q9H607 264 aa14.19□□□□□ -0.14
UBR1-205ENST00000564540 PSEN1P49768 467 aa14.16□□□□□ -0.14
UBR1-205ENST00000564540 PDAP1Q13442 181 aaKnown RBP14.15□□□□□ -0.14
UBR1-205ENST00000564540 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
UBR1-205ENST00000564540 SNPHO15079 494 aa14.14□□□□□ -0.15
UBR1-205ENST00000564540 MMRN1Q13201 1228 aa14.13□□□□□ -0.15
UBR1-205ENST00000564540 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
UBR1-205ENST00000564540 SPNS2Q8IVW8 549 aa14.12□□□□□ -0.15
UBR1-205ENST00000564540 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
UBR1-205ENST00000564540 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.09□□□□□ -0.15
UBR1-205ENST00000564540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.08□□□□□ -0.16
UBR1-205ENST00000564540 ZFP91Q96JP5 570 aaPredicted RBP14.08□□□□□ -0.16
UBR1-205ENST00000564540 CABP2Q9NPB3 220 aa14.01□□□□□ -0.17
UBR1-205ENST00000564540 MARVELD3Q96A59 401 aa14□□□□□ -0.17
UBR1-205ENST00000564540 TAOK2Q9UL54 1235 aa14□□□□□ -0.17
UBR1-205ENST00000564540 PDCD7Q8N8D1 485 aaKnown RBP13.98□□□□□ -0.17
UBR1-205ENST00000564540 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
UBR1-205ENST00000564540 STK25O00506 426 aa13.97□□□□□ -0.17
UBR1-205ENST00000564540 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
UBR1-205ENST00000564540 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
UBR1-205ENST00000564540 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
UBR1-205ENST00000564540 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
UBR1-205ENST00000564540 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
UBR1-205ENST00000564540 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
UBR1-205ENST00000564540 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
UBR1-205ENST00000564540 CHGAP10645 457 aaKnown RBP13.89□□□□□ -0.19
UBR1-205ENST00000564540 EMP3P54852 163 aa13.88□□□□□ -0.19
UBR1-205ENST00000564540 HS6ST3Q8IZP7 471 aa13.86□□□□□ -0.19
UBR1-205ENST00000564540 KRTAP3-3Q9BYR6 98 aa13.85□□□□□ -0.19
UBR1-205ENST00000564540 KRTAP3-2Q9BYR7 98 aa13.85□□□□□ -0.19
UBR1-205ENST00000564540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.196e-7■■□□□ 14.5
UBR1-205ENST00000564540 POTEB3A0JP26 581 aa13.83□□□□□ -0.2
UBR1-205ENST00000564540 POTEBQ6S5H4 581 aa13.83□□□□□ -0.2
UBR1-205ENST00000564540 ILDR1Q86SU0 546 aaPredicted RBP13.83□□□□□ -0.2
UBR1-205ENST00000564540 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
UBR1-205ENST00000564540 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
UBR1-205ENST00000564540 SOX12O15370 315 aa13.78□□□□□ -0.2
UBR1-205ENST00000564540 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
UBR1-205ENST00000564540 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 260.3 ms