RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 CCDC61Q9Y6R9 512 aa10.02□□□□□ -0.81
CAPN3-212ENST00000564503 POTEIP0CG38 1075 aa10.01□□□□□ -0.81
CAPN3-212ENST00000564503 DCBLD2Q96PD2 775 aa9.98□□□□□ -0.81
CAPN3-212ENST00000564503 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
CAPN3-212ENST00000564503 KIF12Q96FN5 646 aa9.95□□□□□ -0.82
CAPN3-212ENST00000564503 MS4A3Q96HJ5 214 aa9.95□□□□□ -0.82
CAPN3-212ENST00000564503 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
CAPN3-212ENST00000564503 MAP3K13O43283 966 aa9.9□□□□□ -0.82
CAPN3-212ENST00000564503 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
CAPN3-212ENST00000564503 IFNLR1Q8IU57 520 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-212ENST00000564503 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
CAPN3-212ENST00000564503 SGIP1Q9BQI5 828 aa9.83□□□□□ -0.84
CAPN3-212ENST00000564503 TRPC6Q9Y210 931 aa9.83□□□□□ -0.84
CAPN3-212ENST00000564503 PCDHB13Q9Y5F0 798 aa9.83□□□□□ -0.84
CAPN3-212ENST00000564503 ATMINO43313 823 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-212ENST00000564503 LHX8Q68G74 356 aa9.82□□□□□ -0.84
CAPN3-212ENST00000564503 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-212ENST00000564503 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
CAPN3-212ENST00000564503 PYGBP11216 843 aa9.8□□□□□ -0.84
CAPN3-212ENST00000564503 GSE1Q14687 1217 aa9.8□□□□□ -0.84
CAPN3-212ENST00000564503 IFNL1Q8IU54 200 aa9.79□□□□□ -0.84
CAPN3-212ENST00000564503 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-212ENST00000564503 TIE1P35590 1138 aa9.77□□□□□ -0.85
CAPN3-212ENST00000564503 ATN1P54259 1190 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-212ENST00000564503 TTLL13PA6NNM8 815 aa9.73□□□□□ -0.85
CAPN3-212ENST00000564503 SLC39A7Q92504 469 aa9.73□□□□□ -0.85
CAPN3-212ENST00000564503 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-212ENST00000564503 C7P10643 843 aa9.72□□□□□ -0.85
CAPN3-212ENST00000564503 CHRM1P11229 460 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-212ENST00000564503 PCDHB8Q9UN66 801 aa9.72□□□□□ -0.85
CAPN3-212ENST00000564503 METRNQ9UJH8 293 aa9.71□□□□□ -0.86
CAPN3-212ENST00000564503 POTEB2H3BUK9 544 aa9.69□□□□□ -0.86
CAPN3-212ENST00000564503 TMEM106CQ9BVX2 250 aa9.68□□□□□ -0.86
CAPN3-212ENST00000564503 TRIM35Q9UPQ4 493 aa9.66□□□□□ -0.86
CAPN3-212ENST00000564503 ZNF467Q7Z7K2 595 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-212ENST00000564503 POTEFA5A3E0 1075 aa9.63□□□□□ -0.87
CAPN3-212ENST00000564503 IER5LQ5T953 404 aa9.6□□□□□ -0.87
CAPN3-212ENST00000564503 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-212ENST00000564503 POTEJP0CG39 1038 aa9.59□□□□□ -0.87
CAPN3-212ENST00000564503 TRIM41Q8WV44 630 aa9.59□□□□□ -0.87
CAPN3-212ENST00000564503 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
CAPN3-212ENST00000564503 SEC24BO95487 1268 aa9.58□□□□□ -0.88
CAPN3-212ENST00000564503 PSEN1P49768 467 aa9.58□□□□□ -0.88
CAPN3-212ENST00000564503 PDAP1Q13442 181 aaKnown RBP9.55□□□□□ -0.88
CAPN3-212ENST00000564503 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-212ENST00000564503 MAMSTRQ6ZN01 415 aa9.52□□□□□ -0.89
CAPN3-212ENST00000564503 PLCG2P16885 1265 aa9.5□□□□□ -0.89
CAPN3-212ENST00000564503 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
CAPN3-212ENST00000564503 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
CAPN3-212ENST00000564503 MKRN3Q13064 507 aaKnown RBP9.48□□□□□ -0.89
CAPN3-212ENST00000564503 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-212ENST00000564503 RIOK3O14730 519 aaKnown RBP9.47□□□□□ -0.89
CAPN3-212ENST00000564503 SCUBE2Q9NQ36 999 aa9.47□□□□□ -0.89
CAPN3-212ENST00000564503 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
CAPN3-212ENST00000564503 PKD2Q13563 968 aa9.43□□□□□ -0.9
CAPN3-212ENST00000564503 ECM2O94769 699 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-212ENST00000564503 PDCD7Q8N8D1 485 aaKnown RBP9.42□□□□□ -0.9
CAPN3-212ENST00000564503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.9
CAPN3-212ENST00000564503 VGFO15240 615 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-212ENST00000564503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-212ENST00000564503 ZFP91Q96JP5 570 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-212ENST00000564503 ILDR1Q86SU0 546 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-212ENST00000564503 EFCAB3Q8N7B9 438 aa9.37□□□□□ -0.91
CAPN3-212ENST00000564503 RGL2O15211 777 aa9.35□□□□□ -0.91
CAPN3-212ENST00000564503 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
CAPN3-212ENST00000564503 L3MBTL3Q96JM7 780 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-212ENST00000564503 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
CAPN3-212ENST00000564503 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
CAPN3-212ENST00000564503 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-212ENST00000564503 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
CAPN3-212ENST00000564503 SOX12O15370 315 aa9.3□□□□□ -0.92
CAPN3-212ENST00000564503 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-212ENST00000564503 STK24Q9Y6E0 443 aa9.29□□□□□ -0.92
CAPN3-212ENST00000564503 STK25O00506 426 aa9.28□□□□□ -0.92
CAPN3-212ENST00000564503 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.93
CAPN3-212ENST00000564503 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
CAPN3-212ENST00000564503 PHF8Q9UPP1 1060 aa9.26□□□□□ -0.93
CAPN3-212ENST00000564503 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-212ENST00000564503 MS4A4AQ96JQ5 239 aa9.25□□□□□ -0.93
CAPN3-212ENST00000564503 G3V3G9 751 aa9.24□□□□□ -0.93
CAPN3-212ENST00000564503 NLRP6P59044 892 aa9.22□□□□□ -0.93
CAPN3-212ENST00000564503 TMEM121BQ9BXQ6 578 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-212ENST00000564503 POTEMA6NI47 508 aa9.21□□□□□ -0.94
CAPN3-212ENST00000564503 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
CAPN3-212ENST00000564503 NISCHQ9Y2I1 1504 aa9.21□□□□□ -0.94
CAPN3-212ENST00000564503 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
CAPN3-212ENST00000564503 MFRPQ9BY79 579 aa9.2□□□□□ -0.94
CAPN3-212ENST00000564503 SNPHO15079 494 aa9.18□□□□□ -0.94
CAPN3-212ENST00000564503 MICALL2Q8IY33 904 aa9.18□□□□□ -0.94
CAPN3-212ENST00000564503 ST18O60284 1047 aa9.17□□□□□ -0.94
CAPN3-212ENST00000564503 HS6ST3Q8IZP7 471 aa9.14□□□□□ -0.95
CAPN3-212ENST00000564503 CHGAP10645 457 aaKnown RBP9.13□□□□□ -0.95
CAPN3-212ENST00000564503 TMEM92Q6UXU6 159 aa9.11□□□□□ -0.95
CAPN3-212ENST00000564503 PPP1R37O75864 691 aa9.07□□□□□ -0.96
CAPN3-212ENST00000564503 HOXB3P14651 431 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-212ENST00000564503 MARVELD3Q96A59 401 aa9.05□□□□□ -0.96
CAPN3-212ENST00000564503 DNAJC5Q9H3Z4 198 aa9.05□□□□□ -0.96
CAPN3-212ENST00000564503 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
CAPN3-212ENST00000564503 NKX1-1Q15270 411 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-212ENST00000564503 DOK7Q18PE1 504 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms