RNA–Protein interactions for RNA: ENST00000564460.2

AL008727.1-201, humanhuman

TSL 2 BASIC

Gene AL008727.1, Length 4,728 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL008727.1-201ENST00000564460 TMC1Q8TDI8 760 aa17.72■□□□□ 0.43
AL008727.1-201ENST00000564460 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
AL008727.1-201ENST00000564460 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.43
AL008727.1-201ENST00000564460 VPS8Q8N3P4 1428 aa17.7■□□□□ 0.42
AL008727.1-201ENST00000564460 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
AL008727.1-201ENST00000564460 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
AL008727.1-201ENST00000564460 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
AL008727.1-201ENST00000564460 DEKP35659 375 aaKnown RBP17.63■□□□□ 0.41
AL008727.1-201ENST00000564460 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
AL008727.1-201ENST00000564460 MTUS2Q5JR59 1369 aa17.6■□□□□ 0.41
AL008727.1-201ENST00000564460 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
AL008727.1-201ENST00000564460 ZNF777Q9ULD5 760 aaPredicted RBP17.58■□□□□ 0.41
AL008727.1-201ENST00000564460 NEFMP07197 916 aa17.57■□□□□ 0.4
AL008727.1-201ENST00000564460 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
AL008727.1-201ENST00000564460 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
AL008727.1-201ENST00000564460 BECN1Q14457 450 aa17.56■□□□□ 0.4
AL008727.1-201ENST00000564460 SOGA1O94964 1423 aa17.55■□□□□ 0.4
AL008727.1-201ENST00000564460 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
AL008727.1-201ENST00000564460 SETD5Q9C0A6 1442 aa17.5■□□□□ 0.39
AL008727.1-201ENST00000564460 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
AL008727.1-201ENST00000564460 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
AL008727.1-201ENST00000564460 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
AL008727.1-201ENST00000564460 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.39
AL008727.1-201ENST00000564460 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.38
AL008727.1-201ENST00000564460 SIN3AQ96ST3 1273 aa17.44■□□□□ 0.38
AL008727.1-201ENST00000564460 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
AL008727.1-201ENST00000564460 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
AL008727.1-201ENST00000564460 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
AL008727.1-201ENST00000564460 CHIC2Q9UKJ5 165 aa17.42■□□□□ 0.38
AL008727.1-201ENST00000564460 MROH2BQ7Z745 1585 aa17.41■□□□□ 0.38
AL008727.1-201ENST00000564460 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.38
AL008727.1-201ENST00000564460 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.37
AL008727.1-201ENST00000564460 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
AL008727.1-201ENST00000564460 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
AL008727.1-201ENST00000564460 TSPY4P0CV99 314 aa17.36■□□□□ 0.37
AL008727.1-201ENST00000564460 TSPY10P0CW01 314 aa17.36■□□□□ 0.37
AL008727.1-201ENST00000564460 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
AL008727.1-201ENST00000564460 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
AL008727.1-201ENST00000564460 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
AL008727.1-201ENST00000564460 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
AL008727.1-201ENST00000564460 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
AL008727.1-201ENST00000564460 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
AL008727.1-201ENST00000564460 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
AL008727.1-201ENST00000564460 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
AL008727.1-201ENST00000564460 L1TD1Q5T7N2 865 aaKnown RBP17.33■□□□□ 0.36
AL008727.1-201ENST00000564460 RRP7BPQ9NSQ0 103 aa17.32■□□□□ 0.36
AL008727.1-201ENST00000564460 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
AL008727.1-201ENST00000564460 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
AL008727.1-201ENST00000564460 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
AL008727.1-201ENST00000564460 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
AL008727.1-201ENST00000564460 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
AL008727.1-201ENST00000564460 KANK4Q5T7N3 995 aaPredicted RBP17.24■□□□□ 0.35
AL008727.1-201ENST00000564460 HSPA5P11021 654 aaKnown RBP17.24■□□□□ 0.35
AL008727.1-201ENST00000564460 NAP1L5Q96NT1 182 aaPredicted RBP17.23■□□□□ 0.35
AL008727.1-201ENST00000564460 ARXQ96QS3 562 aa17.23■□□□□ 0.35
AL008727.1-201ENST00000564460 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
AL008727.1-201ENST00000564460 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
AL008727.1-201ENST00000564460 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
AL008727.1-201ENST00000564460 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
AL008727.1-201ENST00000564460 WIZO95785 1651 aa17.21■□□□□ 0.35
AL008727.1-201ENST00000564460 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
AL008727.1-201ENST00000564460 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
AL008727.1-201ENST00000564460 KDM2AQ9Y2K7 1162 aa17.19■□□□□ 0.34
AL008727.1-201ENST00000564460 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
AL008727.1-201ENST00000564460 CUX2O14529 1486 aa17.16■□□□□ 0.34
AL008727.1-201ENST00000564460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
AL008727.1-201ENST00000564460 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
AL008727.1-201ENST00000564460 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
AL008727.1-201ENST00000564460 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
AL008727.1-201ENST00000564460 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 RALBP1Q15311 655 aa17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
AL008727.1-201ENST00000564460 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
AL008727.1-201ENST00000564460 MS4A1P11836 297 aa17.1■□□□□ 0.33
AL008727.1-201ENST00000564460 RGS3P49796 1198 aa17.1■□□□□ 0.33
AL008727.1-201ENST00000564460 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
AL008727.1-201ENST00000564460 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
AL008727.1-201ENST00000564460 PTMSP20962 102 aa17.09■□□□□ 0.33
AL008727.1-201ENST00000564460 CFDP1Q9UEE9 299 aaPredicted RBP17.08■□□□□ 0.32
AL008727.1-201ENST00000564460 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
AL008727.1-201ENST00000564460 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
AL008727.1-201ENST00000564460 KTN1Q86UP2 1357 aaKnown RBP17.05■□□□□ 0.32
AL008727.1-201ENST00000564460 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
AL008727.1-201ENST00000564460 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
AL008727.1-201ENST00000564460 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
AL008727.1-201ENST00000564460 CARMIL2Q6F5E8 1435 aa17.01■□□□□ 0.31
AL008727.1-201ENST00000564460 GSE1Q14687 1217 aa17.01■□□□□ 0.31
AL008727.1-201ENST00000564460 HSCBQ8IWL3 235 aa17.01■□□□□ 0.31
AL008727.1-201ENST00000564460 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
AL008727.1-201ENST00000564460 KIF21BO75037 1637 aa17.01■□□□□ 0.31
AL008727.1-201ENST00000564460 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
AL008727.1-201ENST00000564460 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
AL008727.1-201ENST00000564460 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
AL008727.1-201ENST00000564460 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
AL008727.1-201ENST00000564460 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms