RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 SOX12O15370 315 aa16.19■□□□□ 0.18
TUBGCP4-208ENST00000564079 POGKQ9P215 609 aa16.19■□□□□ 0.18
TUBGCP4-208ENST00000564079 CCDC9Q9Y3X0 531 aaKnown RBP16.17■□□□□ 0.18
TUBGCP4-208ENST00000564079 TAOK2Q9UL54 1235 aa16.16■□□□□ 0.18
TUBGCP4-208ENST00000564079 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
TUBGCP4-208ENST00000564079 UPF2Q9HAU5 1272 aaKnown RBP16.12■□□□□ 0.17
TUBGCP4-208ENST00000564079 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
TUBGCP4-208ENST00000564079 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
TUBGCP4-208ENST00000564079 CFDP1Q9UEE9 299 aaPredicted RBP16.1■□□□□ 0.17
TUBGCP4-208ENST00000564079 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
TUBGCP4-208ENST00000564079 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
TUBGCP4-208ENST00000564079 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
TUBGCP4-208ENST00000564079 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
TUBGCP4-208ENST00000564079 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
TUBGCP4-208ENST00000564079 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
TUBGCP4-208ENST00000564079 ANP32AP39687 249 aaKnown RBP16.06■□□□□ 0.16
TUBGCP4-208ENST00000564079 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
TUBGCP4-208ENST00000564079 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
TUBGCP4-208ENST00000564079 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
TUBGCP4-208ENST00000564079 ANP32BQ92688 251 aaKnown RBP16.03■□□□□ 0.16
TUBGCP4-208ENST00000564079 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.15
TUBGCP4-208ENST00000564079 GGT6Q6P531 493 aa16.01■□□□□ 0.15
TUBGCP4-208ENST00000564079 NEUROD2Q15784 382 aa15.99■□□□□ 0.15
TUBGCP4-208ENST00000564079 CFAP53Q96M91 514 aa15.99■□□□□ 0.15
TUBGCP4-208ENST00000564079 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
TUBGCP4-208ENST00000564079 TPRNQ4KMQ1 711 aa15.98■□□□□ 0.15
TUBGCP4-208ENST00000564079 ZNF330Q9Y3S2 320 aaPredicted RBP15.98■□□□□ 0.15
TUBGCP4-208ENST00000564079 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
TUBGCP4-208ENST00000564079 HDGFP51858 240 aaKnown RBP15.97■□□□□ 0.15
TUBGCP4-208ENST00000564079 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.15
TUBGCP4-208ENST00000564079 MRS2Q9HD23 443 aa15.96■□□□□ 0.15
TUBGCP4-208ENST00000564079 STK26Q9P289 416 aa15.95■□□□□ 0.14
TUBGCP4-208ENST00000564079 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
TUBGCP4-208ENST00000564079 PHF23Q9BUL5 403 aaPredicted RBP15.94■□□□□ 0.14
TUBGCP4-208ENST00000564079 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
TUBGCP4-208ENST00000564079 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
TUBGCP4-208ENST00000564079 MAPK8IP3Q9UPT6 1336 aa15.91■□□□□ 0.14
TUBGCP4-208ENST00000564079 OS9Q13438 667 aaPredicted RBP15.91■□□□□ 0.14
TUBGCP4-208ENST00000564079 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
TUBGCP4-208ENST00000564079 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
TUBGCP4-208ENST00000564079 CLSTN1O94985 981 aa15.91■□□□□ 0.14
TUBGCP4-208ENST00000564079 SRPK2P78362 688 aaKnown RBP15.91■□□□□ 0.14
TUBGCP4-208ENST00000564079 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
TUBGCP4-208ENST00000564079 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
TUBGCP4-208ENST00000564079 FKBP8Q14318 412 aa15.9■□□□□ 0.14
TUBGCP4-208ENST00000564079 TMX4Q9H1E5 349 aaPredicted RBP15.87■□□□□ 0.13
TUBGCP4-208ENST00000564079 KANK1Q14678 1352 aa15.87■□□□□ 0.13
TUBGCP4-208ENST00000564079 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
TUBGCP4-208ENST00000564079 CARD11Q9BXL7 1154 aa15.86■□□□□ 0.13
TUBGCP4-208ENST00000564079 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
TUBGCP4-208ENST00000564079 NAP1L2Q9ULW6 460 aaPredicted RBP15.85■□□□□ 0.13
TUBGCP4-208ENST00000564079 EIF4G2P78344 907 aaKnown RBP eCLIP15.85■□□□□ 0.13
TUBGCP4-208ENST00000564079 CDCA8Q53HL2 280 aa15.84■□□□□ 0.13
TUBGCP4-208ENST00000564079 NUDCQ9Y266 331 aa15.83■□□□□ 0.12
TUBGCP4-208ENST00000564079 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.12
TUBGCP4-208ENST00000564079 FTSJ3Q8IY81 847 aaKnown RBP15.82■□□□□ 0.12
TUBGCP4-208ENST00000564079 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
TUBGCP4-208ENST00000564079 MSH5O43196 834 aa15.82■□□□□ 0.12
TUBGCP4-208ENST00000564079 CLIP1P30622 1438 aa15.81■□□□□ 0.12
TUBGCP4-208ENST00000564079 KLHL34Q8N239 644 aa15.79■□□□□ 0.12
TUBGCP4-208ENST00000564079 G3V3G9 751 aa15.79■□□□□ 0.12
TUBGCP4-208ENST00000564079 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
TUBGCP4-208ENST00000564079 DCAF8Q5TAQ9 597 aa15.79■□□□□ 0.12
TUBGCP4-208ENST00000564079 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.12
TUBGCP4-208ENST00000564079 CCNB3Q8WWL7 1395 aa15.77■□□□□ 0.11
TUBGCP4-208ENST00000564079 FGD1P98174 961 aa15.76■□□□□ 0.11
TUBGCP4-208ENST00000564079 NUTM2FA1L443 756 aa15.75■□□□□ 0.11
TUBGCP4-208ENST00000564079 ZRSR1Q15695 479 aaKnown RBP15.75■□□□□ 0.11
TUBGCP4-208ENST00000564079 EID1Q9Y6B2 187 aa15.75■□□□□ 0.11
TUBGCP4-208ENST00000564079 CASC1Q6TDU7 716 aa15.74■□□□□ 0.11
TUBGCP4-208ENST00000564079 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
TUBGCP4-208ENST00000564079 NCLP19338 710 aaKnown RBP15.73■□□□□ 0.11
TUBGCP4-208ENST00000564079 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
TUBGCP4-208ENST00000564079 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
TUBGCP4-208ENST00000564079 KCNJ4P48050 445 aa15.72■□□□□ 0.11
TUBGCP4-208ENST00000564079 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
TUBGCP4-208ENST00000564079 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
TUBGCP4-208ENST00000564079 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
TUBGCP4-208ENST00000564079 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
TUBGCP4-208ENST00000564079 DCAF8L1A6NGE4 600 aa15.65■□□□□ 0.1
TUBGCP4-208ENST00000564079 EVA1CP58658 441 aa15.65■□□□□ 0.1
TUBGCP4-208ENST00000564079 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
TUBGCP4-208ENST00000564079 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
TUBGCP4-208ENST00000564079 CHMP3Q9Y3E7 222 aa15.64■□□□□ 0.09
TUBGCP4-208ENST00000564079 GTF2E1P29083 439 aaPredicted RBP15.64■□□□□ 0.09
TUBGCP4-208ENST00000564079 MORC1Q86VD1 984 aa15.63■□□□□ 0.09
TUBGCP4-208ENST00000564079 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
TUBGCP4-208ENST00000564079 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
TUBGCP4-208ENST00000564079 NBR1Q14596 966 aa15.62■□□□□ 0.09
TUBGCP4-208ENST00000564079 KIF3BO15066 747 aa15.61■□□□□ 0.09
TUBGCP4-208ENST00000564079 CARMIL2Q6F5E8 1435 aa15.61■□□□□ 0.09
TUBGCP4-208ENST00000564079 CUX2O14529 1486 aa15.6■□□□□ 0.09
TUBGCP4-208ENST00000564079 TMF1P82094 1093 aa15.59■□□□□ 0.09
TUBGCP4-208ENST00000564079 APBB1O00213 710 aa15.59■□□□□ 0.09
TUBGCP4-208ENST00000564079 TAF7LQ5H9L4 462 aa15.59■□□□□ 0.09
TUBGCP4-208ENST00000564079 GOLGA3Q08378 1498 aa15.58■□□□□ 0.09
TUBGCP4-208ENST00000564079 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
TUBGCP4-208ENST00000564079 EFCAB2Q5VUJ9 269 aa15.58■□□□□ 0.08
TUBGCP4-208ENST00000564079 NACADO15069 1562 aa15.57■□□□□ 0.08
TUBGCP4-208ENST00000564079 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms