RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-208ENST00000563911 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
HERPUD1-208ENST00000563911 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-208ENST00000563911 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-208ENST00000563911 PAXIP1Q6ZW49 1069 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-208ENST00000563911 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
HERPUD1-208ENST00000563911 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-208ENST00000563911 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-208ENST00000563911 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-208ENST00000563911 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
HERPUD1-208ENST00000563911 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-208ENST00000563911 PYGBP11216 843 aa13.14□□□□□ -0.31
HERPUD1-208ENST00000563911 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
HERPUD1-208ENST00000563911 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
HERPUD1-208ENST00000563911 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
HERPUD1-208ENST00000563911 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-208ENST00000563911 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
HERPUD1-208ENST00000563911 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
HERPUD1-208ENST00000563911 STK25O00506 426 aa13.05□□□□□ -0.32
HERPUD1-208ENST00000563911 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
HERPUD1-208ENST00000563911 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
HERPUD1-208ENST00000563911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-208ENST00000563911 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-208ENST00000563911 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
HERPUD1-208ENST00000563911 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-208ENST00000563911 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
HERPUD1-208ENST00000563911 CCDC180Q9P1Z9 1646 aa12.98□□□□□ -0.33
HERPUD1-208ENST00000563911 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
HERPUD1-208ENST00000563911 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-208ENST00000563911 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
HERPUD1-208ENST00000563911 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
HERPUD1-208ENST00000563911 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
HERPUD1-208ENST00000563911 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-208ENST00000563911 PCDHB8Q9UN66 801 aa12.91□□□□□ -0.34
HERPUD1-208ENST00000563911 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
HERPUD1-208ENST00000563911 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
HERPUD1-208ENST00000563911 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-208ENST00000563911 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
HERPUD1-208ENST00000563911 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
HERPUD1-208ENST00000563911 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
HERPUD1-208ENST00000563911 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
HERPUD1-208ENST00000563911 RYDENQ9NUL5 291 aaKnown RBP12.82□□□□□ -0.36
HERPUD1-208ENST00000563911 MAP3K13O43283 966 aa12.81□□□□□ -0.36
HERPUD1-208ENST00000563911 PSEN1P49768 467 aa12.81□□□□□ -0.36
HERPUD1-208ENST00000563911 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
HERPUD1-208ENST00000563911 IFNL1Q8IU54 200 aa12.8□□□□□ -0.36
HERPUD1-208ENST00000563911 BCANQ96GW7 911 aa12.78□□□□□ -0.36
HERPUD1-208ENST00000563911 PHF12Q96QT6 1004 aa12.74□□□□□ -0.37
HERPUD1-208ENST00000563911 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
HERPUD1-208ENST00000563911 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
HERPUD1-208ENST00000563911 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
HERPUD1-208ENST00000563911 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
HERPUD1-208ENST00000563911 SOX12O15370 315 aa12.59□□□□□ -0.39
HERPUD1-208ENST00000563911 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
HERPUD1-208ENST00000563911 NLRP6P59044 892 aa12.58□□□□□ -0.4
HERPUD1-208ENST00000563911 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
HERPUD1-208ENST00000563911 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
HERPUD1-208ENST00000563911 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
HERPUD1-208ENST00000563911 HAX1O00165 279 aa12.54□□□□□ -0.4
HERPUD1-208ENST00000563911 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
HERPUD1-208ENST00000563911 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
HERPUD1-208ENST00000563911 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
HERPUD1-208ENST00000563911 NBR1Q14596 966 aa12.52□□□□□ -0.41
HERPUD1-208ENST00000563911 PPP1R37O75864 691 aa12.51□□□□□ -0.41
HERPUD1-208ENST00000563911 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
HERPUD1-208ENST00000563911 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-208ENST00000563911 WDR70Q9NW82 654 aa12.48□□□□□ -0.41
HERPUD1-208ENST00000563911 TIE1P35590 1138 aa12.46□□□□□ -0.41
HERPUD1-208ENST00000563911 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
HERPUD1-208ENST00000563911 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-208ENST00000563911 EVX2Q03828 476 aa12.43□□□□□ -0.42
HERPUD1-208ENST00000563911 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-208ENST00000563911 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
HERPUD1-208ENST00000563911 BMP2KQ9NSY1 1161 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-208ENST00000563911 CLCN6P51797 869 aa12.4□□□□□ -0.42
HERPUD1-208ENST00000563911 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
HERPUD1-208ENST00000563911 NACADO15069 1562 aa12.38□□□□□ -0.43
HERPUD1-208ENST00000563911 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
HERPUD1-208ENST00000563911 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
HERPUD1-208ENST00000563911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
HERPUD1-208ENST00000563911 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
HERPUD1-208ENST00000563911 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
HERPUD1-208ENST00000563911 KCNV2Q8TDN2 545 aa12.31□□□□□ -0.44
HERPUD1-208ENST00000563911 PDE4AP27815 886 aa12.3□□□□□ -0.44
HERPUD1-208ENST00000563911 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-208ENST00000563911 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-208ENST00000563911 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-208ENST00000563911 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
HERPUD1-208ENST00000563911 E2F4Q16254 413 aa12.26□□□□□ -0.45
HERPUD1-208ENST00000563911 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-208ENST00000563911 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-208ENST00000563911 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
HERPUD1-208ENST00000563911 GABBR2O75899 941 aa12.22□□□□□ -0.45
HERPUD1-208ENST00000563911 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
HERPUD1-208ENST00000563911 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-208ENST00000563911 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-208ENST00000563911 MFSD10Q14728 455 aa12.19□□□□□ -0.46
HERPUD1-208ENST00000563911 IER5LQ5T953 404 aa12.19□□□□□ -0.46
HERPUD1-208ENST00000563911 POTEHQ6S545 545 aa12.19□□□□□ -0.46
HERPUD1-208ENST00000563911 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms