RNA–Protein interactions for RNA: ENST00000563844.1

CASC16-202, Transcript of cancer susceptibility 16, humanhuman

TSL 3 BASIC

Gene CASC16, Length 610 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-202ENST00000563844 PKD2Q13563 968 aa11.79□□□□□ -0.52
CASC16-202ENST00000563844 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
CASC16-202ENST00000563844 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
CASC16-202ENST00000563844 HAX1O00165 279 aa11.76□□□□□ -0.53
CASC16-202ENST00000563844 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
CASC16-202ENST00000563844 CLCN6P51797 869 aa11.73□□□□□ -0.53
CASC16-202ENST00000563844 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
CASC16-202ENST00000563844 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
CASC16-202ENST00000563844 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
CASC16-202ENST00000563844 SGIP1Q9BQI5 828 aa11.69□□□□□ -0.54
CASC16-202ENST00000563844 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
CASC16-202ENST00000563844 PYGBP11216 843 aa11.63□□□□□ -0.55
CASC16-202ENST00000563844 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
CASC16-202ENST00000563844 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
CASC16-202ENST00000563844 EVX2Q03828 476 aa11.6□□□□□ -0.55
CASC16-202ENST00000563844 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
CASC16-202ENST00000563844 RIOK3O14730 519 aaKnown RBP11.57□□□□□ -0.56
CASC16-202ENST00000563844 MAP3K13O43283 966 aa11.57□□□□□ -0.56
CASC16-202ENST00000563844 RGL2O15211 777 aa11.56□□□□□ -0.56
CASC16-202ENST00000563844 PCDHB13Q9Y5F0 798 aa11.56□□□□□ -0.56
CASC16-202ENST00000563844 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
CASC16-202ENST00000563844 VGFO15240 615 aaPredicted RBP11.52□□□□□ -0.57
CASC16-202ENST00000563844 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
CASC16-202ENST00000563844 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
CASC16-202ENST00000563844 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
CASC16-202ENST00000563844 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
CASC16-202ENST00000563844 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
CASC16-202ENST00000563844 GABBR2O75899 941 aa11.46□□□□□ -0.57
CASC16-202ENST00000563844 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
CASC16-202ENST00000563844 TIE1P35590 1138 aa11.43□□□□□ -0.58
CASC16-202ENST00000563844 PSEN1P49768 467 aa11.42□□□□□ -0.58
CASC16-202ENST00000563844 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
CASC16-202ENST00000563844 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
CASC16-202ENST00000563844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
CASC16-202ENST00000563844 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
CASC16-202ENST00000563844 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
CASC16-202ENST00000563844 STK25O00506 426 aa11.35□□□□□ -0.59
CASC16-202ENST00000563844 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
CASC16-202ENST00000563844 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
CASC16-202ENST00000563844 ASTLQ6HA08 431 aaPredicted RBP11.33□□□□□ -0.6
CASC16-202ENST00000563844 BCL11BQ9C0K0 894 aaPredicted RBP11.33□□□□□ -0.6
CASC16-202ENST00000563844 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
CASC16-202ENST00000563844 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
CASC16-202ENST00000563844 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
CASC16-202ENST00000563844 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
CASC16-202ENST00000563844 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
CASC16-202ENST00000563844 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
CASC16-202ENST00000563844 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
CASC16-202ENST00000563844 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
CASC16-202ENST00000563844 SOX12O15370 315 aa11.24□□□□□ -0.61
CASC16-202ENST00000563844 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
CASC16-202ENST00000563844 IER5LQ5T953 404 aa11.24□□□□□ -0.61
CASC16-202ENST00000563844 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
CASC16-202ENST00000563844 RYDENQ9NUL5 291 aaKnown RBP11.24□□□□□ -0.61
CASC16-202ENST00000563844 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
CASC16-202ENST00000563844 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
CASC16-202ENST00000563844 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
CASC16-202ENST00000563844 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
CASC16-202ENST00000563844 EFCAB3Q8N7B9 438 aa11.19□□□□□ -0.62
CASC16-202ENST00000563844 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
CASC16-202ENST00000563844 C7P10643 843 aa11.17□□□□□ -0.62
CASC16-202ENST00000563844 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
CASC16-202ENST00000563844 NLRP6P59044 892 aa11.16□□□□□ -0.62
CASC16-202ENST00000563844 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
CASC16-202ENST00000563844 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
CASC16-202ENST00000563844 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
CASC16-202ENST00000563844 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
CASC16-202ENST00000563844 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
CASC16-202ENST00000563844 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
CASC16-202ENST00000563844 OCEL1Q9H607 264 aa11.11□□□□□ -0.63
CASC16-202ENST00000563844 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
CASC16-202ENST00000563844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.63
CASC16-202ENST00000563844 PHF8Q9UPP1 1060 aa11.09□□□□□ -0.63
CASC16-202ENST00000563844 PLCB2Q00722 1185 aa11.08□□□□□ -0.64
CASC16-202ENST00000563844 METRNQ9UJH8 293 aa11.08□□□□□ -0.64
CASC16-202ENST00000563844 PLCG2P16885 1265 aa11.06□□□□□ -0.64
CASC16-202ENST00000563844 SEC24BO95487 1268 aa11.05□□□□□ -0.64
CASC16-202ENST00000563844 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
CASC16-202ENST00000563844 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
CASC16-202ENST00000563844 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
CASC16-202ENST00000563844 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
CASC16-202ENST00000563844 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
CASC16-202ENST00000563844 COLQQ9Y215 455 aaPredicted RBP11□□□□□ -0.65
CASC16-202ENST00000563844 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
CASC16-202ENST00000563844 TMEM121BQ9BXQ6 578 aaPredicted RBP10.94□□□□□ -0.66
CASC16-202ENST00000563844 G3V3G9 751 aa10.93□□□□□ -0.66
CASC16-202ENST00000563844 DPY19L2Q6NUT2 758 aa10.93□□□□□ -0.66
CASC16-202ENST00000563844 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
CASC16-202ENST00000563844 PPP1R37O75864 691 aa10.92□□□□□ -0.66
CASC16-202ENST00000563844 MICALL2Q8IY33 904 aa10.89□□□□□ -0.67
CASC16-202ENST00000563844 MAMSTRQ6ZN01 415 aa10.87□□□□□ -0.67
CASC16-202ENST00000563844 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
CASC16-202ENST00000563844 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
CASC16-202ENST00000563844 TSHZ2Q9NRE2 1034 aa10.82□□□□□ -0.68
CASC16-202ENST00000563844 POTEB2H3BUK9 544 aa10.81□□□□□ -0.68
CASC16-202ENST00000563844 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
CASC16-202ENST00000563844 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
CASC16-202ENST00000563844 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.8□□□□□ -0.68
CASC16-202ENST00000563844 PDE4AP27815 886 aa10.79□□□□□ -0.68
CASC16-202ENST00000563844 SCUBE2Q9NQ36 999 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms