RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
CDR2-203ENST00000563573 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
CDR2-203ENST00000563573 NUBP1P53384 320 aa11.06□□□□□ -0.64
CDR2-203ENST00000563573 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
CDR2-203ENST00000563573 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
CDR2-203ENST00000563573 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
CDR2-203ENST00000563573 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
CDR2-203ENST00000563573 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
CDR2-203ENST00000563573 LHX8Q68G74 356 aa10.98□□□□□ -0.65
CDR2-203ENST00000563573 MAP3K13O43283 966 aa10.96□□□□□ -0.65
CDR2-203ENST00000563573 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
CDR2-203ENST00000563573 ASTLQ6HA08 431 aaPredicted RBP10.94□□□□□ -0.66
CDR2-203ENST00000563573 GSE1Q14687 1217 aa10.92□□□□□ -0.66
CDR2-203ENST00000563573 ATMINO43313 823 aaPredicted RBP10.91□□□□□ -0.66
CDR2-203ENST00000563573 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
CDR2-203ENST00000563573 TIE1P35590 1138 aa10.9□□□□□ -0.66
CDR2-203ENST00000563573 C7P10643 843 aa10.88□□□□□ -0.67
CDR2-203ENST00000563573 SLC39A7Q92504 469 aa10.88□□□□□ -0.67
CDR2-203ENST00000563573 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
CDR2-203ENST00000563573 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
CDR2-203ENST00000563573 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
CDR2-203ENST00000563573 BMP2KQ9NSY1 1161 aaPredicted RBP10.84□□□□□ -0.67
CDR2-203ENST00000563573 ATN1P54259 1190 aaPredicted RBP10.83□□□□□ -0.68
CDR2-203ENST00000563573 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
CDR2-203ENST00000563573 PYGBP11216 843 aa10.81□□□□□ -0.68
CDR2-203ENST00000563573 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
CDR2-203ENST00000563573 CHRM1P11229 460 aaPredicted RBP10.8□□□□□ -0.68
CDR2-203ENST00000563573 TRPC6Q9Y210 931 aa10.8□□□□□ -0.68
CDR2-203ENST00000563573 TTLL13PA6NNM8 815 aa10.79□□□□□ -0.68
CDR2-203ENST00000563573 ZNF467Q7Z7K2 595 aaPredicted RBP10.77□□□□□ -0.69
CDR2-203ENST00000563573 IER5LQ5T953 404 aa10.75□□□□□ -0.69
CDR2-203ENST00000563573 TMEM106CQ9BVX2 250 aa10.75□□□□□ -0.69
CDR2-203ENST00000563573 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
CDR2-203ENST00000563573 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
CDR2-203ENST00000563573 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
CDR2-203ENST00000563573 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
CDR2-203ENST00000563573 SEC24BO95487 1268 aa10.71□□□□□ -0.69
CDR2-203ENST00000563573 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
CDR2-203ENST00000563573 PCDHB8Q9UN66 801 aa10.7□□□□□ -0.7
CDR2-203ENST00000563573 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
CDR2-203ENST00000563573 SCUBE2Q9NQ36 999 aa10.64□□□□□ -0.71
CDR2-203ENST00000563573 POTEFA5A3E0 1075 aa10.61□□□□□ -0.71
CDR2-203ENST00000563573 PLCG2P16885 1265 aa10.61□□□□□ -0.71
CDR2-203ENST00000563573 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
CDR2-203ENST00000563573 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
CDR2-203ENST00000563573 PSEN1P49768 467 aa10.6□□□□□ -0.71
CDR2-203ENST00000563573 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
CDR2-203ENST00000563573 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
CDR2-203ENST00000563573 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
CDR2-203ENST00000563573 OCEL1Q9H607 264 aa10.57□□□□□ -0.72
CDR2-203ENST00000563573 IRX5P78411 483 aaPredicted RBP10.56□□□□□ -0.72
CDR2-203ENST00000563573 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
CDR2-203ENST00000563573 RIOK3O14730 519 aaKnown RBP10.48□□□□□ -0.73
CDR2-203ENST00000563573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.47□□□□□ -0.732e-11■□□□□ 9
CDR2-203ENST00000563573 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
CDR2-203ENST00000563573 VGFO15240 615 aaPredicted RBP10.45□□□□□ -0.74
CDR2-203ENST00000563573 CABP2Q9NPB3 220 aa10.45□□□□□ -0.74
CDR2-203ENST00000563573 NISCHQ9Y2I1 1504 aa10.44□□□□□ -0.74
CDR2-203ENST00000563573 PDCD7Q8N8D1 485 aaKnown RBP10.43□□□□□ -0.74
CDR2-203ENST00000563573 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
CDR2-203ENST00000563573 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
CDR2-203ENST00000563573 SLAIN1Q8ND83 568 aa10.4□□□□□ -0.74
CDR2-203ENST00000563573 ECM2O94769 699 aaPredicted RBP10.39□□□□□ -0.75
CDR2-203ENST00000563573 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
CDR2-203ENST00000563573 G3V3G9 751 aa10.37□□□□□ -0.75
CDR2-203ENST00000563573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.36□□□□□ -0.75
CDR2-203ENST00000563573 C3orf67Q6ZVT6 689 aa10.36□□□□□ -0.75
CDR2-203ENST00000563573 ZFP91Q96JP5 570 aaPredicted RBP10.36□□□□□ -0.75
CDR2-203ENST00000563573 SOX12O15370 315 aa10.35□□□□□ -0.75
CDR2-203ENST00000563573 FAM163AQ96GL9 167 aaPredicted RBP10.35□□□□□ -0.75
CDR2-203ENST00000563573 SNPHO15079 494 aa10.34□□□□□ -0.75
CDR2-203ENST00000563573 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
CDR2-203ENST00000563573 PKD2Q13563 968 aa10.31□□□□□ -0.76
CDR2-203ENST00000563573 POTEMA6NI47 508 aa10.3□□□□□ -0.76
CDR2-203ENST00000563573 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
CDR2-203ENST00000563573 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
CDR2-203ENST00000563573 DPY19L2Q6NUT2 758 aa10.28□□□□□ -0.76
CDR2-203ENST00000563573 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
CDR2-203ENST00000563573 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.77
CDR2-203ENST00000563573 STK25O00506 426 aa10.25□□□□□ -0.77
CDR2-203ENST00000563573 STK24Q9Y6E0 443 aa10.25□□□□□ -0.77
CDR2-203ENST00000563573 NLRP6P59044 892 aa10.24□□□□□ -0.77
CDR2-203ENST00000563573 RGL2O15211 777 aa10.23□□□□□ -0.77
CDR2-203ENST00000563573 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
CDR2-203ENST00000563573 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
CDR2-203ENST00000563573 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.77
CDR2-203ENST00000563573 ST18O60284 1047 aa10.19□□□□□ -0.78
CDR2-203ENST00000563573 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
CDR2-203ENST00000563573 MS4A4AQ96JQ5 239 aa10.16□□□□□ -0.78
CDR2-203ENST00000563573 FBXO22Q8NEZ5 403 aa10.14□□□□□ -0.79
CDR2-203ENST00000563573 MFRPQ9BY79 579 aa10.12□□□□□ -0.79
CDR2-203ENST00000563573 DOK7Q18PE1 504 aa10.1□□□□□ -0.79
CDR2-203ENST00000563573 HS6ST3Q8IZP7 471 aa10.09□□□□□ -0.79
CDR2-203ENST00000563573 RIMBP2O15034 1052 aa10.07□□□□□ -0.8
CDR2-203ENST00000563573 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
CDR2-203ENST00000563573 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
CDR2-203ENST00000563573 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
CDR2-203ENST00000563573 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
CDR2-203ENST00000563573 HOXB3P14651 431 aaPredicted RBP10.04□□□□□ -0.8
CDR2-203ENST00000563573 EMP3P54852 163 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms