RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 POTEJP0CG39 1038 aa12.68□□□□□ -0.38
DENND4A-205ENST00000562540 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
DENND4A-205ENST00000562540 ATMINO43313 823 aaPredicted RBP12.66□□□□□ -0.38
DENND4A-205ENST00000562540 SLC39A7Q92504 469 aa12.62□□□□□ -0.39
DENND4A-205ENST00000562540 C7P10643 843 aa12.6□□□□□ -0.39
DENND4A-205ENST00000562540 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
DENND4A-205ENST00000562540 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
DENND4A-205ENST00000562540 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
DENND4A-205ENST00000562540 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
DENND4A-205ENST00000562540 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
DENND4A-205ENST00000562540 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
DENND4A-205ENST00000562540 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
DENND4A-205ENST00000562540 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
DENND4A-205ENST00000562540 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
DENND4A-205ENST00000562540 PROM2Q8N271 834 aa12.45□□□□□ -0.42
DENND4A-205ENST00000562540 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
DENND4A-205ENST00000562540 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
DENND4A-205ENST00000562540 BMP2KQ9NSY1 1161 aaPredicted RBP12.45□□□□□ -0.42
DENND4A-205ENST00000562540 MAP3K13O43283 966 aa12.38□□□□□ -0.43
DENND4A-205ENST00000562540 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
DENND4A-205ENST00000562540 TIE1P35590 1138 aa12.34□□□□□ -0.43
DENND4A-205ENST00000562540 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
DENND4A-205ENST00000562540 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
DENND4A-205ENST00000562540 SEC24BO95487 1268 aa12.26□□□□□ -0.45
DENND4A-205ENST00000562540 MIER1Q8N108 512 aa12.26□□□□□ -0.45
DENND4A-205ENST00000562540 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
DENND4A-205ENST00000562540 TRIM35Q9UPQ4 493 aa12.22□□□□□ -0.45
DENND4A-205ENST00000562540 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
DENND4A-205ENST00000562540 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
DENND4A-205ENST00000562540 IER5LQ5T953 404 aa12.17□□□□□ -0.46
DENND4A-205ENST00000562540 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
DENND4A-205ENST00000562540 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
DENND4A-205ENST00000562540 ST18O60284 1047 aa12.12□□□□□ -0.47
DENND4A-205ENST00000562540 IFNL1Q8IU54 200 aa12.12□□□□□ -0.47
DENND4A-205ENST00000562540 NUBP1P53384 320 aa12.11□□□□□ -0.47
DENND4A-205ENST00000562540 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
DENND4A-205ENST00000562540 TMEM106CQ9BVX2 250 aa12.08□□□□□ -0.48
DENND4A-205ENST00000562540 PLCG2P16885 1265 aa12.03□□□□□ -0.48
DENND4A-205ENST00000562540 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
DENND4A-205ENST00000562540 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
DENND4A-205ENST00000562540 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
DENND4A-205ENST00000562540 FKBP8Q14318 412 aa11.96□□□□□ -0.49
DENND4A-205ENST00000562540 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
DENND4A-205ENST00000562540 SPNS2Q8IVW8 549 aa11.92□□□□□ -0.5
DENND4A-205ENST00000562540 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
DENND4A-205ENST00000562540 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
DENND4A-205ENST00000562540 PYGBP11216 843 aa11.89□□□□□ -0.51
DENND4A-205ENST00000562540 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
DENND4A-205ENST00000562540 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
DENND4A-205ENST00000562540 PCDHB8Q9UN66 801 aa11.86□□□□□ -0.51
DENND4A-205ENST00000562540 SNPHO15079 494 aa11.84□□□□□ -0.51
DENND4A-205ENST00000562540 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
DENND4A-205ENST00000562540 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
DENND4A-205ENST00000562540 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
DENND4A-205ENST00000562540 EMP3P54852 163 aa11.73□□□□□ -0.53
DENND4A-205ENST00000562540 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
DENND4A-205ENST00000562540 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
DENND4A-205ENST00000562540 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
DENND4A-205ENST00000562540 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
DENND4A-205ENST00000562540 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
DENND4A-205ENST00000562540 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
DENND4A-205ENST00000562540 MKRN3Q13064 507 aaKnown RBP11.67□□□□□ -0.54
DENND4A-205ENST00000562540 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
DENND4A-205ENST00000562540 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
DENND4A-205ENST00000562540 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
DENND4A-205ENST00000562540 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
DENND4A-205ENST00000562540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.557e-7■■■■■ 31.6
DENND4A-205ENST00000562540 PSEN1P49768 467 aa11.59□□□□□ -0.55
DENND4A-205ENST00000562540 GSE1Q14687 1217 aa11.59□□□□□ -0.55
DENND4A-205ENST00000562540 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
DENND4A-205ENST00000562540 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
DENND4A-205ENST00000562540 ILDR1Q86SU0 546 aaPredicted RBP11.58□□□□□ -0.56
DENND4A-205ENST00000562540 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
DENND4A-205ENST00000562540 CHRM1P11229 460 aaPredicted RBP11.56□□□□□ -0.56
DENND4A-205ENST00000562540 HOXB3P14651 431 aaPredicted RBP11.54□□□□□ -0.56
DENND4A-205ENST00000562540 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
DENND4A-205ENST00000562540 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
DENND4A-205ENST00000562540 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
DENND4A-205ENST00000562540 HOXB1P14653 301 aaPredicted RBP11.45□□□□□ -0.58
DENND4A-205ENST00000562540 G3V3G9 751 aa11.42□□□□□ -0.58
DENND4A-205ENST00000562540 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
DENND4A-205ENST00000562540 ERBB3P21860 1342 aa11.4□□□□□ -0.58
DENND4A-205ENST00000562540 DOK7Q18PE1 504 aa11.38□□□□□ -0.59
DENND4A-205ENST00000562540 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
DENND4A-205ENST00000562540 SPOCK2Q92563 424 aa11.36□□□□□ -0.59
DENND4A-205ENST00000562540 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
DENND4A-205ENST00000562540 IFNLR1Q8IU57 520 aaPredicted RBP11.34□□□□□ -0.59
DENND4A-205ENST00000562540 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
DENND4A-205ENST00000562540 TMEM92Q6UXU6 159 aa11.3□□□□□ -0.6
DENND4A-205ENST00000562540 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
DENND4A-205ENST00000562540 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
DENND4A-205ENST00000562540 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
DENND4A-205ENST00000562540 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
DENND4A-205ENST00000562540 ZNF687Q8N1G0 1237 aa11.25□□□□□ -0.61
DENND4A-205ENST00000562540 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
DENND4A-205ENST00000562540 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
DENND4A-205ENST00000562540 MS4A4AQ96JQ5 239 aa11.16□□□□□ -0.62
DENND4A-205ENST00000562540 PTGER2P43116 358 aa11.14□□□□□ -0.63
DENND4A-205ENST00000562540 ARSIQ5FYB1 569 aa11.14□□□□□ -0.63
DENND4A-205ENST00000562540 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms