RNA–Protein interactions for RNA: ENST00000561458.5

AC055874.1-201, humanhuman

TSL 2 BASIC

Gene AC055874.1, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-201ENST00000561458 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
AC055874.1-201ENST00000561458 SLC39A7Q92504 469 aa11.71□□□□□ -0.53
AC055874.1-201ENST00000561458 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
AC055874.1-201ENST00000561458 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
AC055874.1-201ENST00000561458 MIER1Q8N108 512 aa11.7□□□□□ -0.54
AC055874.1-201ENST00000561458 C7P10643 843 aa11.69□□□□□ -0.54
AC055874.1-201ENST00000561458 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
AC055874.1-201ENST00000561458 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
AC055874.1-201ENST00000561458 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
AC055874.1-201ENST00000561458 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
AC055874.1-201ENST00000561458 MAMSTRQ6ZN01 415 aa11.6□□□□□ -0.55
AC055874.1-201ENST00000561458 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
AC055874.1-201ENST00000561458 MAP3K13O43283 966 aa11.57□□□□□ -0.56
AC055874.1-201ENST00000561458 BMP2KQ9NSY1 1161 aaPredicted RBP11.57□□□□□ -0.56
AC055874.1-201ENST00000561458 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
AC055874.1-201ENST00000561458 TIE1P35590 1138 aa11.55□□□□□ -0.56
AC055874.1-201ENST00000561458 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
AC055874.1-201ENST00000561458 POTEMA6NI47 508 aa11.53□□□□□ -0.56
AC055874.1-201ENST00000561458 SCUBE2Q9NQ36 999 aa11.53□□□□□ -0.56
AC055874.1-201ENST00000561458 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
AC055874.1-201ENST00000561458 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
AC055874.1-201ENST00000561458 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
AC055874.1-201ENST00000561458 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
AC055874.1-201ENST00000561458 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
AC055874.1-201ENST00000561458 NUBP1P53384 320 aa11.45□□□□□ -0.58
AC055874.1-201ENST00000561458 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
AC055874.1-201ENST00000561458 SEC24BO95487 1268 aa11.44□□□□□ -0.58
AC055874.1-201ENST00000561458 FKBP8Q14318 412 aa11.44□□□□□ -0.58
AC055874.1-201ENST00000561458 FAM212AQ96EL1 285 aa11.44□□□□□ -0.58
AC055874.1-201ENST00000561458 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
AC055874.1-201ENST00000561458 IER5LQ5T953 404 aa11.4□□□□□ -0.58
AC055874.1-201ENST00000561458 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
AC055874.1-201ENST00000561458 COLQQ9Y215 455 aaPredicted RBP11.39□□□□□ -0.59
AC055874.1-201ENST00000561458 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
AC055874.1-201ENST00000561458 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
AC055874.1-201ENST00000561458 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
AC055874.1-201ENST00000561458 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
AC055874.1-201ENST00000561458 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
AC055874.1-201ENST00000561458 PLCG2P16885 1265 aa11.28□□□□□ -0.6
AC055874.1-201ENST00000561458 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
AC055874.1-201ENST00000561458 PYGBP11216 843 aa11.24□□□□□ -0.61
AC055874.1-201ENST00000561458 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
AC055874.1-201ENST00000561458 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
AC055874.1-201ENST00000561458 KLHL34Q8N239 644 aa11.17□□□□□ -0.62
AC055874.1-201ENST00000561458 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
AC055874.1-201ENST00000561458 PCDHB8Q9UN66 801 aa11.17□□□□□ -0.62
AC055874.1-201ENST00000561458 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
AC055874.1-201ENST00000561458 GSE1Q14687 1217 aa11.15□□□□□ -0.62
AC055874.1-201ENST00000561458 ZNF467Q7Z7K2 595 aaPredicted RBP11.12□□□□□ -0.63
AC055874.1-201ENST00000561458 ST18O60284 1047 aa11.11□□□□□ -0.63
AC055874.1-201ENST00000561458 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
AC055874.1-201ENST00000561458 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
AC055874.1-201ENST00000561458 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
AC055874.1-201ENST00000561458 SNPHO15079 494 aa11.06□□□□□ -0.64
AC055874.1-201ENST00000561458 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
AC055874.1-201ENST00000561458 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
AC055874.1-201ENST00000561458 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
AC055874.1-201ENST00000561458 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
AC055874.1-201ENST00000561458 PDCD7Q8N8D1 485 aaKnown RBP11.01□□□□□ -0.65
AC055874.1-201ENST00000561458 PSEN1P49768 467 aa11□□□□□ -0.65
AC055874.1-201ENST00000561458 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
AC055874.1-201ENST00000561458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
AC055874.1-201ENST00000561458 PDAP1Q13442 181 aaKnown RBP10.95□□□□□ -0.66
AC055874.1-201ENST00000561458 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
AC055874.1-201ENST00000561458 MARVELD3Q96A59 401 aa10.92□□□□□ -0.66
AC055874.1-201ENST00000561458 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
AC055874.1-201ENST00000561458 IFNLR1Q8IU57 520 aaPredicted RBP10.89□□□□□ -0.67
AC055874.1-201ENST00000561458 ILDR1Q86SU0 546 aaPredicted RBP10.87□□□□□ -0.67
AC055874.1-201ENST00000561458 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
AC055874.1-201ENST00000561458 G3V3G9 751 aa10.86□□□□□ -0.67
AC055874.1-201ENST00000561458 EMP3P54852 163 aa10.86□□□□□ -0.67
AC055874.1-201ENST00000561458 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
AC055874.1-201ENST00000561458 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
AC055874.1-201ENST00000561458 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
AC055874.1-201ENST00000561458 BOLA1Q9Y3E2 137 aa10.82□□□□□ -0.68
AC055874.1-201ENST00000561458 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
AC055874.1-201ENST00000561458 NISCHQ9Y2I1 1504 aa10.77□□□□□ -0.69
AC055874.1-201ENST00000561458 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
AC055874.1-201ENST00000561458 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
AC055874.1-201ENST00000561458 ZNF710Q8N1W2 664 aa10.71□□□□□ -0.69
AC055874.1-201ENST00000561458 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
AC055874.1-201ENST00000561458 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
AC055874.1-201ENST00000561458 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
AC055874.1-201ENST00000561458 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
AC055874.1-201ENST00000561458 DOK7Q18PE1 504 aa10.69□□□□□ -0.7
AC055874.1-201ENST00000561458 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
AC055874.1-201ENST00000561458 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
AC055874.1-201ENST00000561458 RIMBP2O15034 1052 aa10.65□□□□□ -0.7
AC055874.1-201ENST00000561458 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
AC055874.1-201ENST00000561458 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
AC055874.1-201ENST00000561458 MICALL2Q8IY33 904 aa10.62□□□□□ -0.71
AC055874.1-201ENST00000561458 ERBB3P21860 1342 aa10.61□□□□□ -0.71
AC055874.1-201ENST00000561458 SOX12O15370 315 aa10.61□□□□□ -0.71
AC055874.1-201ENST00000561458 VGFO15240 615 aaPredicted RBP10.59□□□□□ -0.71
AC055874.1-201ENST00000561458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
AC055874.1-201ENST00000561458 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.72
AC055874.1-201ENST00000561458 RNF25Q96BH1 459 aaPredicted RBP10.57□□□□□ -0.72
AC055874.1-201ENST00000561458 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
AC055874.1-201ENST00000561458 VARS2Q5ST30 1063 aaKnown RBP10.54□□□□□ -0.72
AC055874.1-201ENST00000561458 TMEM92Q6UXU6 159 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms