RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 METRNQ9UJH8 293 aa15.54■□□□□ 0.08
USP8-216ENST00000561206 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
USP8-216ENST00000561206 SLC39A7Q92504 469 aa15.53■□□□□ 0.08
USP8-216ENST00000561206 MS4A3Q96HJ5 214 aa15.52■□□□□ 0.08
USP8-216ENST00000561206 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
USP8-216ENST00000561206 MAMSTRQ6ZN01 415 aa15.47■□□□□ 0.07
USP8-216ENST00000561206 LCE2DQ5TA82 110 aaPredicted RBP15.4■□□□□ 0.06
USP8-216ENST00000561206 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
USP8-216ENST00000561206 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
USP8-216ENST00000561206 PROM2Q8N271 834 aa15.32■□□□□ 0.04
USP8-216ENST00000561206 SCUBE2Q9NQ36 999 aa15.3■□□□□ 0.04
USP8-216ENST00000561206 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
USP8-216ENST00000561206 POTEFA5A3E0 1075 aa15.27■□□□□ 0.04
USP8-216ENST00000561206 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
USP8-216ENST00000561206 BMP2KQ9NSY1 1161 aaPredicted RBP15.23■□□□□ 0.03
USP8-216ENST00000561206 FAM163AQ96GL9 167 aaPredicted RBP15.21■□□□□ 0.03
USP8-216ENST00000561206 TIE1P35590 1138 aa15.2■□□□□ 0.02
USP8-216ENST00000561206 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
USP8-216ENST00000561206 MAP3K13O43283 966 aa15.12■□□□□ 0.01
USP8-216ENST00000561206 TTLL13PA6NNM8 815 aa15.06■□□□□ 0
USP8-216ENST00000561206 COLQQ9Y215 455 aaPredicted RBP15.06■□□□□ 0
USP8-216ENST00000561206 IER5LQ5T953 404 aa15.04■□□□□ -0
USP8-216ENST00000561206 RASEFQ8IZ41 740 aa15.04■□□□□ -0
USP8-216ENST00000561206 SGIP1Q9BQI5 828 aa15.03■□□□□ -0
USP8-216ENST00000561206 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
USP8-216ENST00000561206 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
USP8-216ENST00000561206 SEC24BO95487 1268 aa14.99□□□□□ -0.01
USP8-216ENST00000561206 CDAN1Q8IWY9 1227 aa14.97□□□□□ -0.01
USP8-216ENST00000561206 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
USP8-216ENST00000561206 MIER1Q8N108 512 aa14.93□□□□□ -0.02
USP8-216ENST00000561206 PCDHB13Q9Y5F0 798 aa14.87□□□□□ -0.03
USP8-216ENST00000561206 ST18O60284 1047 aa14.85□□□□□ -0.03
USP8-216ENST00000561206 SLAIN1Q8ND83 568 aa14.83□□□□□ -0.04
USP8-216ENST00000561206 NUBP1P53384 320 aa14.81□□□□□ -0.04
USP8-216ENST00000561206 IFNL1Q8IU54 200 aa14.79□□□□□ -0.04
USP8-216ENST00000561206 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
USP8-216ENST00000561206 IRX5P78411 483 aaPredicted RBP14.76□□□□□ -0.05
USP8-216ENST00000561206 PLCG2P16885 1265 aa14.73□□□□□ -0.05
USP8-216ENST00000561206 PLCD3Q8N3E9 789 aa14.73□□□□□ -0.05
USP8-216ENST00000561206 TMEM106CQ9BVX2 250 aa14.73□□□□□ -0.05
USP8-216ENST00000561206 TMEM121BQ9BXQ6 578 aaPredicted RBP14.73□□□□□ -0.05
USP8-216ENST00000561206 FAM212AQ96EL1 285 aa14.67□□□□□ -0.06
USP8-216ENST00000561206 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
USP8-216ENST00000561206 SPNS2Q8IVW8 549 aa14.65□□□□□ -0.06
USP8-216ENST00000561206 OCEL1Q9H607 264 aa14.64□□□□□ -0.07
USP8-216ENST00000561206 SNPHO15079 494 aa14.62□□□□□ -0.07
USP8-216ENST00000561206 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.55□□□□□ -0.08
USP8-216ENST00000561206 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
USP8-216ENST00000561206 PDCD7Q8N8D1 485 aaKnown RBP14.45□□□□□ -0.1
USP8-216ENST00000561206 PYGBP11216 843 aa14.42□□□□□ -0.1
USP8-216ENST00000561206 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
USP8-216ENST00000561206 DCAF8Q5TAQ9 597 aa14.4□□□□□ -0.1
USP8-216ENST00000561206 L3MBTL3Q96JM7 780 aaPredicted RBP14.36□□□□□ -0.11
USP8-216ENST00000561206 KRTAP3-3Q9BYR6 98 aa14.35□□□□□ -0.11
USP8-216ENST00000561206 KRTAP3-2Q9BYR7 98 aa14.35□□□□□ -0.11
USP8-216ENST00000561206 EMP3P54852 163 aa14.34□□□□□ -0.11
USP8-216ENST00000561206 C3orf67Q6ZVT6 689 aa14.34□□□□□ -0.11
USP8-216ENST00000561206 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
USP8-216ENST00000561206 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
USP8-216ENST00000561206 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
USP8-216ENST00000561206 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
USP8-216ENST00000561206 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
USP8-216ENST00000561206 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
USP8-216ENST00000561206 CHRM1P11229 460 aaPredicted RBP14.25□□□□□ -0.13
USP8-216ENST00000561206 FAM205CA6NFA0 338 aa14.22□□□□□ -0.13
USP8-216ENST00000561206 GOLGA2Q08379 1002 aa14.22□□□□□ -0.13
USP8-216ENST00000561206 GSE1Q14687 1217 aa14.22□□□□□ -0.13
USP8-216ENST00000561206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP8-216ENST00000561206 FKBP8Q14318 412 aa14.2□□□□□ -0.14
USP8-216ENST00000561206 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
USP8-216ENST00000561206 PSEN1P49768 467 aa14.15□□□□□ -0.14
USP8-216ENST00000561206 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
USP8-216ENST00000561206 HOXB1P14653 301 aaPredicted RBP14.08□□□□□ -0.16
USP8-216ENST00000561206 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
USP8-216ENST00000561206 DPY19L2Q6NUT2 758 aa14.06□□□□□ -0.16
USP8-216ENST00000561206 BOLA1Q9Y3E2 137 aa14.04□□□□□ -0.16
USP8-216ENST00000561206 VASPP50552 380 aaPredicted RBP14.01□□□□□ -0.17
USP8-216ENST00000561206 KLHL34Q8N239 644 aa14□□□□□ -0.17
USP8-216ENST00000561206 DOK7Q18PE1 504 aa13.99□□□□□ -0.17
USP8-216ENST00000561206 G3V3G9 751 aa13.96□□□□□ -0.17
USP8-216ENST00000561206 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.17
USP8-216ENST00000561206 CABP2Q9NPB3 220 aa13.95□□□□□ -0.18
USP8-216ENST00000561206 ERBB3P21860 1342 aa13.94□□□□□ -0.18
USP8-216ENST00000561206 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
USP8-216ENST00000561206 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
USP8-216ENST00000561206 ZSWIM6Q9HCJ5 1215 aa13.88□□□□□ -0.19
USP8-216ENST00000561206 MYT1LQ9UL68 1186 aa13.86□□□□□ -0.19
USP8-216ENST00000561206 VARS2Q5ST30 1063 aaKnown RBP13.85□□□□□ -0.19
USP8-216ENST00000561206 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
USP8-216ENST00000561206 PTGER2P43116 358 aa13.81□□□□□ -0.2
USP8-216ENST00000561206 GPR153Q6NV75 609 aa13.78□□□□□ -0.2
USP8-216ENST00000561206 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
USP8-216ENST00000561206 TMEM92Q6UXU6 159 aa13.77□□□□□ -0.21
USP8-216ENST00000561206 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
USP8-216ENST00000561206 EFCAB3Q8N7B9 438 aa13.74□□□□□ -0.21
USP8-216ENST00000561206 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
USP8-216ENST00000561206 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
USP8-216ENST00000561206 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
USP8-216ENST00000561206 SOX12O15370 315 aa13.63□□□□□ -0.23
USP8-216ENST00000561206 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms