RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
PSMA4-221ENST00000560842 METRNQ9UJH8 293 aa15.04■□□□□ -0
PSMA4-221ENST00000560842 C7P10643 843 aa15.03■□□□□ -0
PSMA4-221ENST00000560842 SLC39A7Q92504 469 aa15.03■□□□□ -0
PSMA4-221ENST00000560842 KIF12Q96FN5 646 aa14.98□□□□□ -0.01
PSMA4-221ENST00000560842 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
PSMA4-221ENST00000560842 MIER1Q8N108 512 aa14.95□□□□□ -0.02
PSMA4-221ENST00000560842 PLSCR2Q9NRY7 297 aa14.95□□□□□ -0.02
PSMA4-221ENST00000560842 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
PSMA4-221ENST00000560842 ATN1P54259 1190 aaPredicted RBP14.93□□□□□ -0.02
PSMA4-221ENST00000560842 MAMSTRQ6ZN01 415 aa14.88□□□□□ -0.03
PSMA4-221ENST00000560842 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
PSMA4-221ENST00000560842 POTEMA6NI47 508 aa14.87□□□□□ -0.03
PSMA4-221ENST00000560842 MAP3K13O43283 966 aa14.86□□□□□ -0.03
PSMA4-221ENST00000560842 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
PSMA4-221ENST00000560842 TRPC6Q9Y210 931 aa14.84□□□□□ -0.03
PSMA4-221ENST00000560842 TIE1P35590 1138 aa14.82□□□□□ -0.04
PSMA4-221ENST00000560842 POTEGQ6S5H5 508 aa14.82□□□□□ -0.04
PSMA4-221ENST00000560842 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
PSMA4-221ENST00000560842 PLCD3Q8N3E9 789 aa14.78□□□□□ -0.04
PSMA4-221ENST00000560842 SCUBE2Q9NQ36 999 aa14.77□□□□□ -0.05
PSMA4-221ENST00000560842 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
PSMA4-221ENST00000560842 TTLL13PA6NNM8 815 aa14.72□□□□□ -0.05
PSMA4-221ENST00000560842 ZBTB47Q9UFB7 747 aaPredicted RBP14.72□□□□□ -0.05
PSMA4-221ENST00000560842 NUBP1P53384 320 aa14.7□□□□□ -0.06
PSMA4-221ENST00000560842 PCDH10Q9P2E7 1040 aa14.7□□□□□ -0.06
PSMA4-221ENST00000560842 LCE2DQ5TA82 110 aaPredicted RBP14.67□□□□□ -0.06
PSMA4-221ENST00000560842 PCDHB13Q9Y5F0 798 aa14.67□□□□□ -0.06
PSMA4-221ENST00000560842 COLQQ9Y215 455 aaPredicted RBP14.66□□□□□ -0.06
PSMA4-221ENST00000560842 FAM163AQ96GL9 167 aaPredicted RBP14.65□□□□□ -0.06
PSMA4-221ENST00000560842 SEC24BO95487 1268 aa14.64□□□□□ -0.07
PSMA4-221ENST00000560842 IER5LQ5T953 404 aa14.62□□□□□ -0.07
PSMA4-221ENST00000560842 TRIM35Q9UPQ4 493 aa14.62□□□□□ -0.07
PSMA4-221ENST00000560842 IFNL1Q8IU54 200 aa14.59□□□□□ -0.07
PSMA4-221ENST00000560842 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
PSMA4-221ENST00000560842 FKBP8Q14318 412 aa14.56□□□□□ -0.08
PSMA4-221ENST00000560842 TMEM106CQ9BVX2 250 aa14.51□□□□□ -0.09
PSMA4-221ENST00000560842 DCAF8Q5TAQ9 597 aa14.43□□□□□ -0.1
PSMA4-221ENST00000560842 PLCG2P16885 1265 aa14.41□□□□□ -0.1
PSMA4-221ENST00000560842 IRX5P78411 483 aaPredicted RBP14.41□□□□□ -0.1
PSMA4-221ENST00000560842 SLAIN1Q8ND83 568 aa14.4□□□□□ -0.1
PSMA4-221ENST00000560842 PYGBP11216 843 aa14.38□□□□□ -0.11
PSMA4-221ENST00000560842 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
PSMA4-221ENST00000560842 OCEL1Q9H607 264 aa14.34□□□□□ -0.11
PSMA4-221ENST00000560842 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
PSMA4-221ENST00000560842 ST18O60284 1047 aa14.31□□□□□ -0.12
PSMA4-221ENST00000560842 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
PSMA4-221ENST00000560842 GSE1Q14687 1217 aa14.23□□□□□ -0.13
PSMA4-221ENST00000560842 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.21□□□□□ -0.13
PSMA4-221ENST00000560842 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
PSMA4-221ENST00000560842 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
PSMA4-221ENST00000560842 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
PSMA4-221ENST00000560842 SNPHO15079 494 aa14.17□□□□□ -0.14
PSMA4-221ENST00000560842 CHRM1P11229 460 aaPredicted RBP14.17□□□□□ -0.14
PSMA4-221ENST00000560842 TMEM121BQ9BXQ6 578 aaPredicted RBP14.16□□□□□ -0.14
PSMA4-221ENST00000560842 PDCD7Q8N8D1 485 aaKnown RBP14.15□□□□□ -0.14
PSMA4-221ENST00000560842 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
PSMA4-221ENST00000560842 GOLGA2Q08379 1002 aa14.1□□□□□ -0.15
PSMA4-221ENST00000560842 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
PSMA4-221ENST00000560842 PSEN1P49768 467 aa14.07□□□□□ -0.16
PSMA4-221ENST00000560842 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
PSMA4-221ENST00000560842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
PSMA4-221ENST00000560842 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
PSMA4-221ENST00000560842 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
PSMA4-221ENST00000560842 PDAP1Q13442 181 aaKnown RBP13.98□□□□□ -0.17
PSMA4-221ENST00000560842 SPNS2Q8IVW8 549 aa13.98□□□□□ -0.17
PSMA4-221ENST00000560842 MMRN1Q13201 1228 aa13.96□□□□□ -0.17
PSMA4-221ENST00000560842 SPOCK2Q92563 424 aa13.95□□□□□ -0.18
PSMA4-221ENST00000560842 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
PSMA4-221ENST00000560842 DPY19L2Q6NUT2 758 aa13.91□□□□□ -0.18
PSMA4-221ENST00000560842 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
PSMA4-221ENST00000560842 EMP3P54852 163 aa13.9□□□□□ -0.18
PSMA4-221ENST00000560842 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
PSMA4-221ENST00000560842 BOLA1Q9Y3E2 137 aa13.85□□□□□ -0.19
PSMA4-221ENST00000560842 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
PSMA4-221ENST00000560842 POTEB3A0JP26 581 aa13.83□□□□□ -0.2
PSMA4-221ENST00000560842 POTEBQ6S5H4 581 aa13.83□□□□□ -0.2
PSMA4-221ENST00000560842 G3V3G9 751 aa13.82□□□□□ -0.2
PSMA4-221ENST00000560842 FAM205CA6NFA0 338 aa13.81□□□□□ -0.2
PSMA4-221ENST00000560842 KRTAP3-3Q9BYR6 98 aa13.79□□□□□ -0.2
PSMA4-221ENST00000560842 KRTAP3-2Q9BYR7 98 aa13.79□□□□□ -0.2
PSMA4-221ENST00000560842 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
PSMA4-221ENST00000560842 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
PSMA4-221ENST00000560842 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
PSMA4-221ENST00000560842 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
PSMA4-221ENST00000560842 ZNF710Q8N1W2 664 aa13.68□□□□□ -0.22
PSMA4-221ENST00000560842 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
PSMA4-221ENST00000560842 ERBB3P21860 1342 aa13.61□□□□□ -0.23
PSMA4-221ENST00000560842 SOX12O15370 315 aa13.59□□□□□ -0.23
PSMA4-221ENST00000560842 RIMBP2O15034 1052 aa13.58□□□□□ -0.24
PSMA4-221ENST00000560842 MICALL2Q8IY33 904 aa13.58□□□□□ -0.24
PSMA4-221ENST00000560842 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
PSMA4-221ENST00000560842 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
PSMA4-221ENST00000560842 ZSWIM6Q9HCJ5 1215 aa13.54□□□□□ -0.24
PSMA4-221ENST00000560842 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
PSMA4-221ENST00000560842 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
PSMA4-221ENST00000560842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
PSMA4-221ENST00000560842 VARS2Q5ST30 1063 aaKnown RBP13.51□□□□□ -0.25
PSMA4-221ENST00000560842 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
PSMA4-221ENST00000560842 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms