RNA–Protein interactions for RNA: ENST00000560133.5

LINS1-207, Transcript of lines homolog 1, humanhuman

TSL 2 BASIC

Gene LINS1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-207ENST00000560133 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
LINS1-207ENST00000560133 POTEGQ6S5H5 508 aa12.67□□□□□ -0.38
LINS1-207ENST00000560133 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
LINS1-207ENST00000560133 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
LINS1-207ENST00000560133 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
LINS1-207ENST00000560133 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
LINS1-207ENST00000560133 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
LINS1-207ENST00000560133 MIER1Q8N108 512 aa12.61□□□□□ -0.39
LINS1-207ENST00000560133 SLC39A7Q92504 469 aa12.6□□□□□ -0.39
LINS1-207ENST00000560133 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
LINS1-207ENST00000560133 C7P10643 843 aa12.58□□□□□ -0.4
LINS1-207ENST00000560133 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
LINS1-207ENST00000560133 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
LINS1-207ENST00000560133 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
LINS1-207ENST00000560133 PCDH10Q9P2E7 1040 aa12.53□□□□□ -0.4
LINS1-207ENST00000560133 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
LINS1-207ENST00000560133 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
LINS1-207ENST00000560133 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
LINS1-207ENST00000560133 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
LINS1-207ENST00000560133 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
LINS1-207ENST00000560133 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
LINS1-207ENST00000560133 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
LINS1-207ENST00000560133 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
LINS1-207ENST00000560133 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
LINS1-207ENST00000560133 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
LINS1-207ENST00000560133 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
LINS1-207ENST00000560133 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
LINS1-207ENST00000560133 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
LINS1-207ENST00000560133 POTEFA5A3E0 1075 aa12.36□□□□□ -0.43
LINS1-207ENST00000560133 TRPC6Q9Y210 931 aa12.35□□□□□ -0.43
LINS1-207ENST00000560133 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
LINS1-207ENST00000560133 NUBP1P53384 320 aa12.32□□□□□ -0.44
LINS1-207ENST00000560133 TIE1P35590 1138 aa12.31□□□□□ -0.44
LINS1-207ENST00000560133 MAP3K13O43283 966 aa12.3□□□□□ -0.44
LINS1-207ENST00000560133 SEC24BO95487 1268 aa12.25□□□□□ -0.45
LINS1-207ENST00000560133 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
LINS1-207ENST00000560133 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
LINS1-207ENST00000560133 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
LINS1-207ENST00000560133 PKD2Q13563 968 aa12.22□□□□□ -0.45
LINS1-207ENST00000560133 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
LINS1-207ENST00000560133 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
LINS1-207ENST00000560133 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
LINS1-207ENST00000560133 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
LINS1-207ENST00000560133 IER5LQ5T953 404 aa12.15□□□□□ -0.46
LINS1-207ENST00000560133 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
LINS1-207ENST00000560133 GSE1Q14687 1217 aa12.13□□□□□ -0.47
LINS1-207ENST00000560133 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
LINS1-207ENST00000560133 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
LINS1-207ENST00000560133 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
LINS1-207ENST00000560133 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
LINS1-207ENST00000560133 ST18O60284 1047 aa12.06□□□□□ -0.48
LINS1-207ENST00000560133 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
LINS1-207ENST00000560133 PLCG2P16885 1265 aa12.02□□□□□ -0.49
LINS1-207ENST00000560133 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
LINS1-207ENST00000560133 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.49
LINS1-207ENST00000560133 PYGBP11216 843 aa12.01□□□□□ -0.49
LINS1-207ENST00000560133 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
LINS1-207ENST00000560133 RGL2O15211 777 aa11.99□□□□□ -0.49
LINS1-207ENST00000560133 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
LINS1-207ENST00000560133 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
LINS1-207ENST00000560133 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
LINS1-207ENST00000560133 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
LINS1-207ENST00000560133 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
LINS1-207ENST00000560133 RIOK3O14730 519 aaKnown RBP11.87□□□□□ -0.51
LINS1-207ENST00000560133 SNPHO15079 494 aa11.87□□□□□ -0.51
LINS1-207ENST00000560133 SPNS2Q8IVW8 549 aa11.87□□□□□ -0.51
LINS1-207ENST00000560133 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
LINS1-207ENST00000560133 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
LINS1-207ENST00000560133 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
LINS1-207ENST00000560133 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
LINS1-207ENST00000560133 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
LINS1-207ENST00000560133 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
LINS1-207ENST00000560133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
LINS1-207ENST00000560133 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
LINS1-207ENST00000560133 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
LINS1-207ENST00000560133 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
LINS1-207ENST00000560133 PSEN1P49768 467 aa11.72□□□□□ -0.53
LINS1-207ENST00000560133 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
LINS1-207ENST00000560133 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
LINS1-207ENST00000560133 EMP3P54852 163 aa11.7□□□□□ -0.54
LINS1-207ENST00000560133 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
LINS1-207ENST00000560133 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
LINS1-207ENST00000560133 STK25O00506 426 aa11.69□□□□□ -0.54
LINS1-207ENST00000560133 BCL11BQ9C0K0 894 aaPredicted RBP11.68□□□□□ -0.54
LINS1-207ENST00000560133 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
LINS1-207ENST00000560133 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
LINS1-207ENST00000560133 MKRN3Q13064 507 aaKnown RBP11.66□□□□□ -0.54
LINS1-207ENST00000560133 STK24Q9Y6E0 443 aa11.65□□□□□ -0.54
LINS1-207ENST00000560133 HS3ST6Q96QI5 342 aa11.63□□□□□ -0.55
LINS1-207ENST00000560133 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
LINS1-207ENST00000560133 KRTAP3-3Q9BYR6 98 aa11.62□□□□□ -0.55
LINS1-207ENST00000560133 KRTAP3-2Q9BYR7 98 aa11.62□□□□□ -0.55
LINS1-207ENST00000560133 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
LINS1-207ENST00000560133 POTEB3A0JP26 581 aa11.61□□□□□ -0.55
LINS1-207ENST00000560133 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
LINS1-207ENST00000560133 POTEBQ6S5H4 581 aa11.61□□□□□ -0.55
LINS1-207ENST00000560133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINS1-207ENST00000560133 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
LINS1-207ENST00000560133 CABP2Q9NPB3 220 aa11.56□□□□□ -0.56
LINS1-207ENST00000560133 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms