RNA–Protein interactions for RNA: ENST00000560006.1

SEMA6D-214, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-214ENST00000560006 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
SEMA6D-214ENST00000560006 PROM2Q8N271 834 aa10.11□□□□□ -0.79
SEMA6D-214ENST00000560006 ATMINO43313 823 aaPredicted RBP10.09□□□□□ -0.79
SEMA6D-214ENST00000560006 METRNQ9UJH8 293 aa10.09□□□□□ -0.79
SEMA6D-214ENST00000560006 POTEMA6NI47 508 aa10.08□□□□□ -0.8
SEMA6D-214ENST00000560006 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
SEMA6D-214ENST00000560006 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
SEMA6D-214ENST00000560006 C7P10643 843 aa10.04□□□□□ -0.8
SEMA6D-214ENST00000560006 POTEGQ6S5H5 508 aa10.04□□□□□ -0.8
SEMA6D-214ENST00000560006 CCDC61Q9Y6R9 512 aa10.04□□□□□ -0.8
SEMA6D-214ENST00000560006 ATN1P54259 1190 aaPredicted RBP9.98□□□□□ -0.81
SEMA6D-214ENST00000560006 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
SEMA6D-214ENST00000560006 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
SEMA6D-214ENST00000560006 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
SEMA6D-214ENST00000560006 MAMSTRQ6ZN01 415 aa9.96□□□□□ -0.82
SEMA6D-214ENST00000560006 POTEFA5A3E0 1075 aa9.95□□□□□ -0.82
SEMA6D-214ENST00000560006 BMP2KQ9NSY1 1161 aaPredicted RBP9.94□□□□□ -0.82
SEMA6D-214ENST00000560006 TRPC6Q9Y210 931 aa9.93□□□□□ -0.82
SEMA6D-214ENST00000560006 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
SEMA6D-214ENST00000560006 UNC13AQ9UPW8 1703 aa9.9□□□□□ -0.82
SEMA6D-214ENST00000560006 TIE1P35590 1138 aa9.89□□□□□ -0.83
SEMA6D-214ENST00000560006 MAP3K13O43283 966 aa9.88□□□□□ -0.83
SEMA6D-214ENST00000560006 RASEFQ8IZ41 740 aa9.88□□□□□ -0.83
SEMA6D-214ENST00000560006 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
SEMA6D-214ENST00000560006 RB1CC1Q8TDY2 1594 aa9.84□□□□□ -0.83
SEMA6D-214ENST00000560006 TTLL13PA6NNM8 815 aa9.83□□□□□ -0.84
SEMA6D-214ENST00000560006 COLQQ9Y215 455 aaPredicted RBP9.82□□□□□ -0.84
SEMA6D-214ENST00000560006 FAM163AQ96GL9 167 aaPredicted RBP9.8□□□□□ -0.84
SEMA6D-214ENST00000560006 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
SEMA6D-214ENST00000560006 MIER1Q8N108 512 aa9.79□□□□□ -0.84
SEMA6D-214ENST00000560006 SGIP1Q9BQI5 828 aa9.78□□□□□ -0.84
SEMA6D-214ENST00000560006 IER5LQ5T953 404 aa9.76□□□□□ -0.85
SEMA6D-214ENST00000560006 TRIM35Q9UPQ4 493 aa9.75□□□□□ -0.85
SEMA6D-214ENST00000560006 SEC24BO95487 1268 aa9.73□□□□□ -0.85
SEMA6D-214ENST00000560006 NUBP1P53384 320 aa9.73□□□□□ -0.85
SEMA6D-214ENST00000560006 PCDHB13Q9Y5F0 798 aa9.72□□□□□ -0.85
SEMA6D-214ENST00000560006 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
SEMA6D-214ENST00000560006 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
SEMA6D-214ENST00000560006 NACADO15069 1562 aa9.67□□□□□ -0.86
SEMA6D-214ENST00000560006 ZBTB47Q9UFB7 747 aaPredicted RBP9.66□□□□□ -0.86
SEMA6D-214ENST00000560006 DCAF8L2P0C7V8 631 aa9.64□□□□□ -0.87
SEMA6D-214ENST00000560006 CDAN1Q8IWY9 1227 aa9.64□□□□□ -0.87
SEMA6D-214ENST00000560006 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
SEMA6D-214ENST00000560006 ST18O60284 1047 aa9.62□□□□□ -0.87
SEMA6D-214ENST00000560006 FKBP8Q14318 412 aa9.62□□□□□ -0.87
SEMA6D-214ENST00000560006 SLAIN1Q8ND83 568 aa9.62□□□□□ -0.87
SEMA6D-214ENST00000560006 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
SEMA6D-214ENST00000560006 TMEM106CQ9BVX2 250 aa9.62□□□□□ -0.87
SEMA6D-214ENST00000560006 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
SEMA6D-214ENST00000560006 PLCG2P16885 1265 aa9.58□□□□□ -0.88
SEMA6D-214ENST00000560006 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
SEMA6D-214ENST00000560006 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
SEMA6D-214ENST00000560006 PYGBP11216 843 aa9.49□□□□□ -0.89
SEMA6D-214ENST00000560006 CC2D2AQ9P2K1 1620 aa9.47□□□□□ -0.89
SEMA6D-214ENST00000560006 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
SEMA6D-214ENST00000560006 PDCD7Q8N8D1 485 aaKnown RBP9.46□□□□□ -0.9
SEMA6D-214ENST00000560006 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
SEMA6D-214ENST00000560006 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
SEMA6D-214ENST00000560006 DCAF8Q5TAQ9 597 aa9.44□□□□□ -0.9
SEMA6D-214ENST00000560006 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.44□□□□□ -0.9
SEMA6D-214ENST00000560006 SNPHO15079 494 aa9.43□□□□□ -0.9
SEMA6D-214ENST00000560006 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
SEMA6D-214ENST00000560006 MARVELD3Q96A59 401 aa9.4□□□□□ -0.9
SEMA6D-214ENST00000560006 CECR2Q9BXF3 1484 aa9.37□□□□□ -0.91
SEMA6D-214ENST00000560006 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
SEMA6D-214ENST00000560006 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
SEMA6D-214ENST00000560006 MYO15BQ96JP2 1530 aa9.36□□□□□ -0.91
SEMA6D-214ENST00000560006 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
SEMA6D-214ENST00000560006 C3orf67Q6ZVT6 689 aa9.34□□□□□ -0.91
SEMA6D-214ENST00000560006 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
SEMA6D-214ENST00000560006 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
SEMA6D-214ENST00000560006 GSE1Q14687 1217 aa9.33□□□□□ -0.92
SEMA6D-214ENST00000560006 L3MBTL3Q96JM7 780 aaPredicted RBP9.33□□□□□ -0.92
SEMA6D-214ENST00000560006 POTEB3A0JP26 581 aa9.31□□□□□ -0.92
SEMA6D-214ENST00000560006 MKRN3Q13064 507 aaKnown RBP9.31□□□□□ -0.92
SEMA6D-214ENST00000560006 POTEBQ6S5H4 581 aa9.31□□□□□ -0.92
SEMA6D-214ENST00000560006 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
SEMA6D-214ENST00000560006 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
SEMA6D-214ENST00000560006 ZCCHC6Q5VYS8 1495 aaKnown RBP9.31□□□□□ -0.92
SEMA6D-214ENST00000560006 EMP3P54852 163 aa9.3□□□□□ -0.92
SEMA6D-214ENST00000560006 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
SEMA6D-214ENST00000560006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.92
SEMA6D-214ENST00000560006 PSEN1P49768 467 aa9.28□□□□□ -0.92
SEMA6D-214ENST00000560006 GOLGA2Q08379 1002 aa9.28□□□□□ -0.92
SEMA6D-214ENST00000560006 HS3ST6Q96QI5 342 aa9.28□□□□□ -0.92
SEMA6D-214ENST00000560006 SHROOM4Q9ULL8 1493 aa9.26□□□□□ -0.93
SEMA6D-214ENST00000560006 FAM205CA6NFA0 338 aa9.23□□□□□ -0.93
SEMA6D-214ENST00000560006 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
SEMA6D-214ENST00000560006 HOXB3P14651 431 aaPredicted RBP9.22□□□□□ -0.93
SEMA6D-214ENST00000560006 PDAP1Q13442 181 aaKnown RBP9.22□□□□□ -0.93
SEMA6D-214ENST00000560006 DPY19L2Q6NUT2 758 aa9.22□□□□□ -0.93
SEMA6D-214ENST00000560006 DCAF1Q9Y4B6 1507 aa9.21□□□□□ -0.94
SEMA6D-214ENST00000560006 CABP2Q9NPB3 220 aa9.17□□□□□ -0.94
SEMA6D-214ENST00000560006 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
SEMA6D-214ENST00000560006 HOXB1P14653 301 aaPredicted RBP9.15□□□□□ -0.94
SEMA6D-214ENST00000560006 IFNLR1Q8IU57 520 aaPredicted RBP9.11□□□□□ -0.95
SEMA6D-214ENST00000560006 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
SEMA6D-214ENST00000560006 DNAJC5Q9H3Z4 198 aa9.1□□□□□ -0.95
SEMA6D-214ENST00000560006 G3V3G9 751 aa9.09□□□□□ -0.95
SEMA6D-214ENST00000560006 DOK7Q18PE1 504 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms