RNA–Protein interactions for RNA: ENST00000559806.5

LRRC49-220, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-220ENST00000559806 ATMINO43313 823 aaPredicted RBP14.37□□□□□ -0.11
LRRC49-220ENST00000559806 ASTLQ6HA08 431 aaPredicted RBP14.37□□□□□ -0.11
LRRC49-220ENST00000559806 C7P10643 843 aa14.33□□□□□ -0.12
LRRC49-220ENST00000559806 SLC39A7Q92504 469 aa14.33□□□□□ -0.12
LRRC49-220ENST00000559806 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
LRRC49-220ENST00000559806 FAM163AQ96GL9 167 aaPredicted RBP14.27□□□□□ -0.13
LRRC49-220ENST00000559806 LCE2DQ5TA82 110 aaPredicted RBP14.26□□□□□ -0.13
LRRC49-220ENST00000559806 ATN1P54259 1190 aaPredicted RBP14.24□□□□□ -0.13
LRRC49-220ENST00000559806 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
LRRC49-220ENST00000559806 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
LRRC49-220ENST00000559806 SCUBE2Q9NQ36 999 aa14.18□□□□□ -0.14
LRRC49-220ENST00000559806 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
LRRC49-220ENST00000559806 TRPC6Q9Y210 931 aa14.15□□□□□ -0.14
LRRC49-220ENST00000559806 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
LRRC49-220ENST00000559806 KIF12Q96FN5 646 aa14.13□□□□□ -0.15
LRRC49-220ENST00000559806 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
LRRC49-220ENST00000559806 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
LRRC49-220ENST00000559806 MAP3K13O43283 966 aa14.04□□□□□ -0.16
LRRC49-220ENST00000559806 COLQQ9Y215 455 aaPredicted RBP14.01□□□□□ -0.17
LRRC49-220ENST00000559806 SEC24BO95487 1268 aa13.97□□□□□ -0.17
LRRC49-220ENST00000559806 TIE1P35590 1138 aa13.97□□□□□ -0.17
LRRC49-220ENST00000559806 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
LRRC49-220ENST00000559806 PROM2Q8N271 834 aa13.96□□□□□ -0.17
LRRC49-220ENST00000559806 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
LRRC49-220ENST00000559806 CDAN1Q8IWY9 1227 aa13.93□□□□□ -0.18
LRRC49-220ENST00000559806 MIER1Q8N108 512 aa13.91□□□□□ -0.18
LRRC49-220ENST00000559806 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
LRRC49-220ENST00000559806 PLEKHG5O94827 1062 aa13.85□□□□□ -0.19
LRRC49-220ENST00000559806 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
LRRC49-220ENST00000559806 ST18O60284 1047 aa13.8□□□□□ -0.2
LRRC49-220ENST00000559806 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
LRRC49-220ENST00000559806 IER5LQ5T953 404 aa13.78□□□□□ -0.2
LRRC49-220ENST00000559806 IFNL1Q8IU54 200 aa13.73□□□□□ -0.21
LRRC49-220ENST00000559806 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
LRRC49-220ENST00000559806 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
LRRC49-220ENST00000559806 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
LRRC49-220ENST00000559806 PLCG2P16885 1265 aa13.68□□□□□ -0.22
LRRC49-220ENST00000559806 NUBP1P53384 320 aa13.66□□□□□ -0.22
LRRC49-220ENST00000559806 MMRN1Q13201 1228 aa13.62□□□□□ -0.23
LRRC49-220ENST00000559806 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
LRRC49-220ENST00000559806 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
LRRC49-220ENST00000559806 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
LRRC49-220ENST00000559806 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
LRRC49-220ENST00000559806 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
LRRC49-220ENST00000559806 OCEL1Q9H607 264 aa13.52□□□□□ -0.25
LRRC49-220ENST00000559806 TMEM121BQ9BXQ6 578 aaPredicted RBP13.51□□□□□ -0.25
LRRC49-220ENST00000559806 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
LRRC49-220ENST00000559806 PYGBP11216 843 aa13.47□□□□□ -0.25
LRRC49-220ENST00000559806 SNPHO15079 494 aa13.46□□□□□ -0.25
LRRC49-220ENST00000559806 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
LRRC49-220ENST00000559806 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
LRRC49-220ENST00000559806 EMP3P54852 163 aa13.36□□□□□ -0.27
LRRC49-220ENST00000559806 POTEB3A0JP26 581 aa13.34□□□□□ -0.27
LRRC49-220ENST00000559806 POTEBQ6S5H4 581 aa13.34□□□□□ -0.27
LRRC49-220ENST00000559806 PDCD7Q8N8D1 485 aaKnown RBP13.33□□□□□ -0.28
LRRC49-220ENST00000559806 C3orf67Q6ZVT6 689 aa13.32□□□□□ -0.28
LRRC49-220ENST00000559806 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
LRRC49-220ENST00000559806 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
LRRC49-220ENST00000559806 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
LRRC49-220ENST00000559806 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
LRRC49-220ENST00000559806 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
LRRC49-220ENST00000559806 MKRN3Q13064 507 aaKnown RBP13.24□□□□□ -0.29
LRRC49-220ENST00000559806 L3MBTL3Q96JM7 780 aaPredicted RBP13.24□□□□□ -0.29
LRRC49-220ENST00000559806 FKBP8Q14318 412 aa13.21□□□□□ -0.29
LRRC49-220ENST00000559806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.3
LRRC49-220ENST00000559806 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
LRRC49-220ENST00000559806 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
LRRC49-220ENST00000559806 PSEN1P49768 467 aa13.12□□□□□ -0.31
LRRC49-220ENST00000559806 GSE1Q14687 1217 aa13.08□□□□□ -0.32
LRRC49-220ENST00000559806 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
LRRC49-220ENST00000559806 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
LRRC49-220ENST00000559806 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
LRRC49-220ENST00000559806 CHRM1P11229 460 aaPredicted RBP13.01□□□□□ -0.33
LRRC49-220ENST00000559806 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
LRRC49-220ENST00000559806 BOLA1Q9Y3E2 137 aa13.01□□□□□ -0.33
LRRC49-220ENST00000559806 ERBB3P21860 1342 aa13□□□□□ -0.33
LRRC49-220ENST00000559806 CABP2Q9NPB3 220 aa13□□□□□ -0.33
LRRC49-220ENST00000559806 FBXO3Q9UK99 471 aa13□□□□□ -0.33
LRRC49-220ENST00000559806 G3V3G9 751 aa12.99□□□□□ -0.33
LRRC49-220ENST00000559806 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
LRRC49-220ENST00000559806 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
LRRC49-220ENST00000559806 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
LRRC49-220ENST00000559806 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
LRRC49-220ENST00000559806 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
LRRC49-220ENST00000559806 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
LRRC49-220ENST00000559806 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
LRRC49-220ENST00000559806 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
LRRC49-220ENST00000559806 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
LRRC49-220ENST00000559806 TMEM92Q6UXU6 159 aa12.78□□□□□ -0.36
LRRC49-220ENST00000559806 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
LRRC49-220ENST00000559806 ZNF687Q8N1G0 1237 aa12.77□□□□□ -0.37
LRRC49-220ENST00000559806 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
LRRC49-220ENST00000559806 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
LRRC49-220ENST00000559806 MICALL2Q8IY33 904 aa12.71□□□□□ -0.37
LRRC49-220ENST00000559806 SPOCK2Q92563 424 aa12.71□□□□□ -0.37
LRRC49-220ENST00000559806 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
LRRC49-220ENST00000559806 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
LRRC49-220ENST00000559806 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
LRRC49-220ENST00000559806 PTGER2P43116 358 aa12.63□□□□□ -0.39
LRRC49-220ENST00000559806 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms