RNA–Protein interactions for RNA: ENST00000559685.5

LRRC49-219, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 758 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-219ENST00000559685 MAMSTRQ6ZN01 415 aa13.33□□□□□ -0.28
LRRC49-219ENST00000559685 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
LRRC49-219ENST00000559685 ATMINO43313 823 aaPredicted RBP13.29□□□□□ -0.28
LRRC49-219ENST00000559685 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
LRRC49-219ENST00000559685 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
LRRC49-219ENST00000559685 MS4A3Q96HJ5 214 aa13.26□□□□□ -0.29
LRRC49-219ENST00000559685 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
LRRC49-219ENST00000559685 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
LRRC49-219ENST00000559685 LCE2DQ5TA82 110 aaPredicted RBP13.19□□□□□ -0.3
LRRC49-219ENST00000559685 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
LRRC49-219ENST00000559685 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
LRRC49-219ENST00000559685 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
LRRC49-219ENST00000559685 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
LRRC49-219ENST00000559685 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
LRRC49-219ENST00000559685 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
LRRC49-219ENST00000559685 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
LRRC49-219ENST00000559685 TIE1P35590 1138 aa12.96□□□□□ -0.33
LRRC49-219ENST00000559685 CDAN1Q8IWY9 1227 aa12.96□□□□□ -0.33
LRRC49-219ENST00000559685 FKBP8Q14318 412 aa12.94□□□□□ -0.34
LRRC49-219ENST00000559685 TRPC6Q9Y210 931 aa12.93□□□□□ -0.34
LRRC49-219ENST00000559685 SEC24BO95487 1268 aa12.92□□□□□ -0.34
LRRC49-219ENST00000559685 MAP3K13O43283 966 aa12.9□□□□□ -0.34
LRRC49-219ENST00000559685 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
LRRC49-219ENST00000559685 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
LRRC49-219ENST00000559685 IER5LQ5T953 404 aa12.82□□□□□ -0.36
LRRC49-219ENST00000559685 PROM2Q8N271 834 aa12.81□□□□□ -0.36
LRRC49-219ENST00000559685 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
LRRC49-219ENST00000559685 ST18O60284 1047 aa12.78□□□□□ -0.36
LRRC49-219ENST00000559685 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
LRRC49-219ENST00000559685 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
LRRC49-219ENST00000559685 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
LRRC49-219ENST00000559685 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
LRRC49-219ENST00000559685 MIER1Q8N108 512 aa12.73□□□□□ -0.37
LRRC49-219ENST00000559685 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
LRRC49-219ENST00000559685 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
LRRC49-219ENST00000559685 SPNS2Q8IVW8 549 aa12.65□□□□□ -0.38
LRRC49-219ENST00000559685 PLCG2P16885 1265 aa12.63□□□□□ -0.39
LRRC49-219ENST00000559685 TMEM121BQ9BXQ6 578 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-219ENST00000559685 IFNL1Q8IU54 200 aa12.59□□□□□ -0.39
LRRC49-219ENST00000559685 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
LRRC49-219ENST00000559685 SNPHO15079 494 aa12.58□□□□□ -0.4
LRRC49-219ENST00000559685 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
LRRC49-219ENST00000559685 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
LRRC49-219ENST00000559685 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
LRRC49-219ENST00000559685 NUBP1P53384 320 aa12.52□□□□□ -0.41
LRRC49-219ENST00000559685 OCEL1Q9H607 264 aa12.51□□□□□ -0.41
LRRC49-219ENST00000559685 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
LRRC49-219ENST00000559685 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
LRRC49-219ENST00000559685 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
LRRC49-219ENST00000559685 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
LRRC49-219ENST00000559685 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
LRRC49-219ENST00000559685 EMP3P54852 163 aa12.36□□□□□ -0.43
LRRC49-219ENST00000559685 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
LRRC49-219ENST00000559685 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
LRRC49-219ENST00000559685 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
LRRC49-219ENST00000559685 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
LRRC49-219ENST00000559685 PYGBP11216 843 aa12.29□□□□□ -0.44
LRRC49-219ENST00000559685 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
LRRC49-219ENST00000559685 HS3ST6Q96QI5 342 aa12.29□□□□□ -0.44
LRRC49-219ENST00000559685 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
LRRC49-219ENST00000559685 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
LRRC49-219ENST00000559685 POTEB3A0JP26 581 aa12.26□□□□□ -0.45
LRRC49-219ENST00000559685 FAM205CA6NFA0 338 aa12.26□□□□□ -0.45
LRRC49-219ENST00000559685 POTEBQ6S5H4 581 aa12.26□□□□□ -0.45
LRRC49-219ENST00000559685 PDCD7Q8N8D1 485 aaKnown RBP12.26□□□□□ -0.45
LRRC49-219ENST00000559685 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
LRRC49-219ENST00000559685 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
LRRC49-219ENST00000559685 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
LRRC49-219ENST00000559685 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
LRRC49-219ENST00000559685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
LRRC49-219ENST00000559685 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
LRRC49-219ENST00000559685 GSE1Q14687 1217 aa12.05□□□□□ -0.48
LRRC49-219ENST00000559685 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
LRRC49-219ENST00000559685 HOXB1P14653 301 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-219ENST00000559685 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-219ENST00000559685 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
LRRC49-219ENST00000559685 PSEN1P49768 467 aa12.03□□□□□ -0.48
LRRC49-219ENST00000559685 ZNF710Q8N1W2 664 aa12.02□□□□□ -0.49
LRRC49-219ENST00000559685 ERBB3P21860 1342 aa12.02□□□□□ -0.49
LRRC49-219ENST00000559685 G3V3G9 751 aa12.01□□□□□ -0.49
LRRC49-219ENST00000559685 CHRM1P11229 460 aaPredicted RBP12.01□□□□□ -0.49
LRRC49-219ENST00000559685 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
LRRC49-219ENST00000559685 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
LRRC49-219ENST00000559685 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
LRRC49-219ENST00000559685 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
LRRC49-219ENST00000559685 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
LRRC49-219ENST00000559685 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
LRRC49-219ENST00000559685 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
LRRC49-219ENST00000559685 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
LRRC49-219ENST00000559685 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
LRRC49-219ENST00000559685 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
LRRC49-219ENST00000559685 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
LRRC49-219ENST00000559685 PTGER2P43116 358 aa11.84□□□□□ -0.51
LRRC49-219ENST00000559685 PKD2Q13563 968 aa11.82□□□□□ -0.52
LRRC49-219ENST00000559685 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
LRRC49-219ENST00000559685 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
LRRC49-219ENST00000559685 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
LRRC49-219ENST00000559685 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
LRRC49-219ENST00000559685 TMEM92Q6UXU6 159 aa11.68□□□□□ -0.54
LRRC49-219ENST00000559685 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms