RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 STAG3Q9UJ98 1225 aa5.09□□□□□ -1.59
LINC02253-201ENST00000559321 PODXL2Q9NZ53 605 aa5.07□□□□□ -1.6
LINC02253-201ENST00000559321 P3H3Q8IVL6 736 aa5.06□□□□□ -1.6
LINC02253-201ENST00000559321 TRHP20396 242 aaPredicted RBP5.05□□□□□ -1.6
LINC02253-201ENST00000559321 PLCD3Q8N3E9 789 aa5.02□□□□□ -1.61
LINC02253-201ENST00000559321 ZBTB47Q9UFB7 747 aaPredicted RBP5.02□□□□□ -1.61
LINC02253-201ENST00000559321 ZBTB12Q9Y330 459 aaPredicted RBP5.01□□□□□ -1.61
LINC02253-201ENST00000559321 BRPF1P55201 1214 aaPredicted RBP5□□□□□ -1.61
LINC02253-201ENST00000559321 RYDENQ9NUL5 291 aaKnown RBP5□□□□□ -1.61
LINC02253-201ENST00000559321 GTPBP6O43824 516 aaPredicted RBP4.99□□□□□ -1.61
LINC02253-201ENST00000559321 NKX1-1Q15270 411 aaPredicted RBP4.97□□□□□ -1.61
LINC02253-201ENST00000559321 LMOD2Q6P5Q4 547 aa4.97□□□□□ -1.61
LINC02253-201ENST00000559321 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.97□□□□□ -1.61
LINC02253-201ENST00000559321 CIZ1Q9ULV3 898 aaPredicted RBP4.97□□□□□ -1.61
LINC02253-201ENST00000559321 SUPT5HO00267 1087 aaKnown RBP4.96□□□□□ -1.62
LINC02253-201ENST00000559321 PLEKHG5O94827 1062 aa4.96□□□□□ -1.62
LINC02253-201ENST00000559321 NPM2Q86SE8 214 aaKnown RBP4.94□□□□□ -1.62
LINC02253-201ENST00000559321 MIER1Q8N108 512 aa4.94□□□□□ -1.62
LINC02253-201ENST00000559321 RNF25Q96BH1 459 aaPredicted RBP4.94□□□□□ -1.62
LINC02253-201ENST00000559321 POLA2Q14181 598 aa4.93□□□□□ -1.62
LINC02253-201ENST00000559321 GSE1Q14687 1217 aa4.93□□□□□ -1.62
LINC02253-201ENST00000559321 RIOK3O14730 519 aaKnown RBP4.92□□□□□ -1.62
LINC02253-201ENST00000559321 NEUROD2Q15784 382 aa4.92□□□□□ -1.62
LINC02253-201ENST00000559321 UBTFP17480 764 aaKnown RBP4.91□□□□□ -1.62
LINC02253-201ENST00000559321 TRIM26Q12899 539 aaPredicted RBP4.91□□□□□ -1.62
LINC02253-201ENST00000559321 PIP4P2Q8N4L2 257 aa4.91□□□□□ -1.62
LINC02253-201ENST00000559321 SGIP1Q9BQI5 828 aa4.91□□□□□ -1.62
LINC02253-201ENST00000559321 VGFO15240 615 aaPredicted RBP4.9□□□□□ -1.63
LINC02253-201ENST00000559321 RSPH6AQ9H0K4 717 aa4.9□□□□□ -1.63
LINC02253-201ENST00000559321 SSUH2Q9Y2M2 353 aa4.9□□□□□ -1.63
LINC02253-201ENST00000559321 KCNV2Q8TDN2 545 aa4.89□□□□□ -1.63
LINC02253-201ENST00000559321 SPDYE2BA6NHP3 402 aa4.88□□□□□ -1.63
LINC02253-201ENST00000559321 STK25O00506 426 aa4.88□□□□□ -1.63
LINC02253-201ENST00000559321 SPDYE6P0CI01 402 aa4.88□□□□□ -1.63
LINC02253-201ENST00000559321 SPDYE2Q495Y8 402 aa4.88□□□□□ -1.63
LINC02253-201ENST00000559321 ZMYND15Q9H091 742 aa4.88□□□□□ -1.63
LINC02253-201ENST00000559321 POTEMA6NI47 508 aa4.87□□□□□ -1.63
LINC02253-201ENST00000559321 ZC3H15Q8WU90 426 aaKnown RBP4.87□□□□□ -1.63
LINC02253-201ENST00000559321 ZNF692Q9BU19 519 aaPredicted RBP4.87□□□□□ -1.63
LINC02253-201ENST00000559321 WDR70Q9NW82 654 aa4.86□□□□□ -1.63
LINC02253-201ENST00000559321 HRCP23327 699 aa4.85□□□□□ -1.63
LINC02253-201ENST00000559321 ARHGEF1Q92888 912 aaKnown RBP4.85□□□□□ -1.63
LINC02253-201ENST00000559321 CHRM1P11229 460 aaPredicted RBP4.83□□□□□ -1.64
LINC02253-201ENST00000559321 POTEGQ6S5H5 508 aa4.83□□□□□ -1.64
LINC02253-201ENST00000559321 SLC24A3Q9HC58 644 aa4.83□□□□□ -1.64
LINC02253-201ENST00000559321 CCDC9Q9Y3X0 531 aaKnown RBP4.83□□□□□ -1.64
LINC02253-201ENST00000559321 ZMYND10O75800 440 aa4.82□□□□□ -1.64
LINC02253-201ENST00000559321 EVX2Q03828 476 aa4.82□□□□□ -1.64
LINC02253-201ENST00000559321 PABPN1Q86U42 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC02253-201ENST00000559321 ZBTB7CA1YPR0 619 aa4.81□□□□□ -1.64
LINC02253-201ENST00000559321 TESPA1A2RU30 521 aaPredicted RBP4.81□□□□□ -1.64
LINC02253-201ENST00000559321 NUBP1P53384 320 aa4.8□□□□□ -1.64
LINC02253-201ENST00000559321 BCL11BQ9C0K0 894 aaPredicted RBP4.8□□□□□ -1.64
LINC02253-201ENST00000559321 STK24Q9Y6E0 443 aa4.79□□□□□ -1.64
LINC02253-201ENST00000559321 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.78□□□□□ -1.64
LINC02253-201ENST00000559321 SMYD5Q6GMV2 418 aa4.78□□□□□ -1.64
LINC02253-201ENST00000559321 FAM212AQ96EL1 285 aa4.78□□□□□ -1.64
LINC02253-201ENST00000559321 ZFP91Q96JP5 570 aaPredicted RBP4.78□□□□□ -1.64
LINC02253-201ENST00000559321 PCDH10Q9P2E7 1040 aa4.78□□□□□ -1.64
LINC02253-201ENST00000559321 PDIA4P13667 645 aaKnown RBP4.77□□□□□ -1.65
LINC02253-201ENST00000559321 BARGINQ6ZT62 677 aa4.77□□□□□ -1.65
LINC02253-201ENST00000559321 CADPS2Q86UW7 1296 aa4.76□□□□□ -1.65
LINC02253-201ENST00000559321 AK7Q96M32 723 aa4.76□□□□□ -1.65
LINC02253-201ENST00000559321 GABBR2O75899 941 aa4.75□□□□□ -1.65
LINC02253-201ENST00000559321 E2F4Q16254 413 aa4.75□□□□□ -1.65
LINC02253-201ENST00000559321 DCAF8Q5TAQ9 597 aa4.75□□□□□ -1.65
LINC02253-201ENST00000559321 OSCARQ8IYS5 282 aa4.75□□□□□ -1.65
LINC02253-201ENST00000559321 AKT1S1Q96B36 256 aa4.75□□□□□ -1.65
LINC02253-201ENST00000559321 C1orf115Q9H7X2 142 aa4.75□□□□□ -1.65
LINC02253-201ENST00000559321 FLIIQ13045 1269 aa4.74□□□□□ -1.65
LINC02253-201ENST00000559321 REM2Q8IYK8 340 aaPredicted RBP4.74□□□□□ -1.65
LINC02253-201ENST00000559321 SEMA3EO15041 775 aa4.73□□□□□ -1.65
LINC02253-201ENST00000559321 ARIH1Q9Y4X5 557 aaPredicted RBP4.73□□□□□ -1.65
LINC02253-201ENST00000559321 FXR2P51116 673 aaKnown RBP eCLIP4.72□□□□□ -1.65
LINC02253-201ENST00000559321 KDM4CQ9H3R0 1056 aa4.72□□□□□ -1.65
LINC02253-201ENST00000559321 PITPNM1O00562 1244 aa4.71□□□□□ -1.66
LINC02253-201ENST00000559321 ARID3AQ99856 593 aa4.71□□□□□ -1.66
LINC02253-201ENST00000559321 KCTD17Q8N5Z5 321 aa4.7□□□□□ -1.66
LINC02253-201ENST00000559321 GPBP1L1Q9HC44 474 aaPredicted RBP4.7□□□□□ -1.66
LINC02253-201ENST00000559321 A6NJR5 290 aa4.69□□□□□ -1.66
LINC02253-201ENST00000559321 APBB1O00213 710 aa4.69□□□□□ -1.66
LINC02253-201ENST00000559321 TRAIPQ9BWF2 469 aa4.69□□□□□ -1.66
LINC02253-201ENST00000559321 MKRN3Q13064 507 aaKnown RBP4.68□□□□□ -1.66
LINC02253-201ENST00000559321 IL27Q8NEV9 243 aa4.68□□□□□ -1.66
LINC02253-201ENST00000559321 NECTIN2Q92692 538 aa4.68□□□□□ -1.66
LINC02253-201ENST00000559321 PDE4DQ08499 809 aa4.67□□□□□ -1.66
LINC02253-201ENST00000559321 GPIHBP1Q8IV16 184 aa4.67□□□□□ -1.66
LINC02253-201ENST00000559321 GOPCQ9HD26 462 aa4.67□□□□□ -1.66
LINC02253-201ENST00000559321 TRIM66O15016 1216 aa4.66□□□□□ -1.66
LINC02253-201ENST00000559321 ZNF467Q7Z7K2 595 aaPredicted RBP4.66□□□□□ -1.66
LINC02253-201ENST00000559321 DDRGK1Q96HY6 314 aa4.66□□□□□ -1.66
LINC02253-201ENST00000559321 ARID3CA6NKF2 412 aa4.65□□□□□ -1.67
LINC02253-201ENST00000559321 ONECUT3O60422 494 aaPredicted RBP4.65□□□□□ -1.67
LINC02253-201ENST00000559321 CCDC82Q8N4S0 544 aa4.65□□□□□ -1.67
LINC02253-201ENST00000559321 MFRPQ9BY79 579 aa4.65□□□□□ -1.67
LINC02253-201ENST00000559321 MNX1P50219 401 aaPredicted RBP4.64□□□□□ -1.67
LINC02253-201ENST00000559321 PDAP1Q13442 181 aaKnown RBP4.64□□□□□ -1.67
LINC02253-201ENST00000559321 MFSD10Q14728 455 aa4.64□□□□□ -1.67
LINC02253-201ENST00000559321 KRI1Q8N9T8 703 aaKnown RBP4.64□□□□□ -1.67
LINC02253-201ENST00000559321 TRAK2O60296 914 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms