RNA–Protein interactions for RNA: ENST00000559146.5

PSMA4-210, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-210ENST00000559146 MIER1Q8N108 512 aa15.99■□□□□ 0.15
PSMA4-210ENST00000559146 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
PSMA4-210ENST00000559146 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
PSMA4-210ENST00000559146 GABBR2O75899 941 aa15.91■□□□□ 0.14
PSMA4-210ENST00000559146 PAK3O75914 559 aaPredicted RBP15.91■□□□□ 0.14
PSMA4-210ENST00000559146 PLCD3Q8N3E9 789 aa15.91■□□□□ 0.14
PSMA4-210ENST00000559146 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
PSMA4-210ENST00000559146 CLCN6P51797 869 aa15.85■□□□□ 0.13
PSMA4-210ENST00000559146 ZNF579Q8NAF0 562 aaKnown RBP15.82■□□□□ 0.12
PSMA4-210ENST00000559146 DNAJC5Q9H3Z4 198 aa15.8■□□□□ 0.12
PSMA4-210ENST00000559146 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
PSMA4-210ENST00000559146 TSPYL2Q9H2G4 693 aaPredicted RBP15.72■□□□□ 0.11
PSMA4-210ENST00000559146 PHF12Q96QT6 1004 aa15.68■□□□□ 0.1
PSMA4-210ENST00000559146 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
PSMA4-210ENST00000559146 DCBLD2Q96PD2 775 aa15.62■□□□□ 0.09
PSMA4-210ENST00000559146 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
PSMA4-210ENST00000559146 VASPP50552 380 aaPredicted RBP15.61■□□□□ 0.09
PSMA4-210ENST00000559146 RASEFQ8IZ41 740 aa15.61■□□□□ 0.09
PSMA4-210ENST00000559146 CUX2O14529 1486 aa15.6■□□□□ 0.09
PSMA4-210ENST00000559146 GALR2O43603 387 aaPredicted RBP15.59■□□□□ 0.09
PSMA4-210ENST00000559146 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
PSMA4-210ENST00000559146 ATAD2BQ9ULI0 1458 aa15.58■□□□□ 0.08
PSMA4-210ENST00000559146 NUBP1P53384 320 aa15.56■□□□□ 0.08
PSMA4-210ENST00000559146 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
PSMA4-210ENST00000559146 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
PSMA4-210ENST00000559146 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
PSMA4-210ENST00000559146 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
PSMA4-210ENST00000559146 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
PSMA4-210ENST00000559146 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
PSMA4-210ENST00000559146 KIF12Q96FN5 646 aa15.48■□□□□ 0.07
PSMA4-210ENST00000559146 MS4A3Q96HJ5 214 aa15.47■□□□□ 0.07
PSMA4-210ENST00000559146 NESP48681 1621 aa15.43■□□□□ 0.06
PSMA4-210ENST00000559146 DCAF8Q5TAQ9 597 aa15.43■□□□□ 0.06
PSMA4-210ENST00000559146 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
PSMA4-210ENST00000559146 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
PSMA4-210ENST00000559146 MAP3K13O43283 966 aa15.41■□□□□ 0.06
PSMA4-210ENST00000559146 IFNLR1Q8IU57 520 aaPredicted RBP15.35■□□□□ 0.05
PSMA4-210ENST00000559146 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
PSMA4-210ENST00000559146 PEG3Q9GZU2 1588 aa15.33■□□□□ 0.05
PSMA4-210ENST00000559146 LHX8Q68G74 356 aa15.33■□□□□ 0.04
PSMA4-210ENST00000559146 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
PSMA4-210ENST00000559146 GSE1Q14687 1217 aa15.31■□□□□ 0.04
PSMA4-210ENST00000559146 ASTLQ6HA08 431 aaPredicted RBP15.3■□□□□ 0.04
PSMA4-210ENST00000559146 SPOCK2Q92563 424 aa15.3■□□□□ 0.04
PSMA4-210ENST00000559146 LAMC3Q9Y6N6 1575 aa15.29■□□□□ 0.04
PSMA4-210ENST00000559146 ATMINO43313 823 aaPredicted RBP15.29■□□□□ 0.04
PSMA4-210ENST00000559146 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
PSMA4-210ENST00000559146 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.04
PSMA4-210ENST00000559146 PYGBP11216 843 aa15.26■□□□□ 0.03
PSMA4-210ENST00000559146 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
PSMA4-210ENST00000559146 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
PSMA4-210ENST00000559146 TIE1P35590 1138 aa15.23■□□□□ 0.03
PSMA4-210ENST00000559146 TRPC6Q9Y210 931 aa15.23■□□□□ 0.03
PSMA4-210ENST00000559146 IFNL1Q8IU54 200 aa15.22■□□□□ 0.03
PSMA4-210ENST00000559146 BMP2KQ9NSY1 1161 aaPredicted RBP15.21■□□□□ 0.03
PSMA4-210ENST00000559146 ATN1P54259 1190 aaPredicted RBP15.2■□□□□ 0.02
PSMA4-210ENST00000559146 CADPSQ9ULU8 1353 aa15.2■□□□□ 0.02
PSMA4-210ENST00000559146 SLC39A7Q92504 469 aa15.19■□□□□ 0.02
PSMA4-210ENST00000559146 C7P10643 843 aa15.18■□□□□ 0.02
PSMA4-210ENST00000559146 CIZ1Q9ULV3 898 aaPredicted RBP15.18■□□□□ 0.02
PSMA4-210ENST00000559146 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
PSMA4-210ENST00000559146 METRNQ9UJH8 293 aa15.15■□□□□ 0.02
PSMA4-210ENST00000559146 TTLL13PA6NNM8 815 aa15.14■□□□□ 0.01
PSMA4-210ENST00000559146 CHRM1P11229 460 aaPredicted RBP15.13■□□□□ 0.01
PSMA4-210ENST00000559146 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
PSMA4-210ENST00000559146 PCDHB8Q9UN66 801 aa15.1■□□□□ 0.01
PSMA4-210ENST00000559146 TMEM106CQ9BVX2 250 aa15.09■□□□□ 0.01
PSMA4-210ENST00000559146 ZNF467Q7Z7K2 595 aaPredicted RBP15.07■□□□□ 0
PSMA4-210ENST00000559146 TRIM41Q8WV44 630 aa15.07■□□□□ 0
PSMA4-210ENST00000559146 TRIM35Q9UPQ4 493 aa15.06■□□□□ 0
PSMA4-210ENST00000559146 WIZO95785 1651 aa15.06■□□□□ 0
PSMA4-210ENST00000559146 WDR62O43379 1518 aa15.05■□□□□ -0
PSMA4-210ENST00000559146 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
PSMA4-210ENST00000559146 POTEB2H3BUK9 544 aa15.03■□□□□ -0
PSMA4-210ENST00000559146 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
PSMA4-210ENST00000559146 SEC24BO95487 1268 aa15□□□□□ -0.01
PSMA4-210ENST00000559146 IER5LQ5T953 404 aa14.99□□□□□ -0.01
PSMA4-210ENST00000559146 CFTRP13569 1480 aa14.96□□□□□ -0.01
PSMA4-210ENST00000559146 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
PSMA4-210ENST00000559146 POTEFA5A3E0 1075 aa14.92□□□□□ -0.02
PSMA4-210ENST00000559146 PSEN1P49768 467 aa14.92□□□□□ -0.02
PSMA4-210ENST00000559146 OTUD5Q96G74 571 aa14.92□□□□□ -0.02
PSMA4-210ENST00000559146 MAMSTRQ6ZN01 415 aa14.91□□□□□ -0.02
PSMA4-210ENST00000559146 COLQQ9Y215 455 aaPredicted RBP14.91□□□□□ -0.02
PSMA4-210ENST00000559146 TOP2AP11388 1531 aaKnown RBP14.89□□□□□ -0.03
PSMA4-210ENST00000559146 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
PSMA4-210ENST00000559146 PDAP1Q13442 181 aaKnown RBP14.89□□□□□ -0.03
PSMA4-210ENST00000559146 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
PSMA4-210ENST00000559146 POTEJP0CG39 1038 aa14.86□□□□□ -0.03
PSMA4-210ENST00000559146 PLCG2P16885 1265 aa14.86□□□□□ -0.03
PSMA4-210ENST00000559146 SCUBE2Q9NQ36 999 aa14.83□□□□□ -0.04
PSMA4-210ENST00000559146 MKRN3Q13064 507 aaKnown RBP14.82□□□□□ -0.04
PSMA4-210ENST00000559146 IRX5P78411 483 aaPredicted RBP14.81□□□□□ -0.04
PSMA4-210ENST00000559146 OCEL1Q9H607 264 aa14.81□□□□□ -0.04
PSMA4-210ENST00000559146 RIOK3O14730 519 aaKnown RBP14.75□□□□□ -0.05
PSMA4-210ENST00000559146 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
PSMA4-210ENST00000559146 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
PSMA4-210ENST00000559146 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
PSMA4-210ENST00000559146 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.05
PSMA4-210ENST00000559146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.062e-8■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms