RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
GABPB1-209ENST00000559100 MARVELD3Q96A59 401 aa5.65□□□□□ -1.5
GABPB1-209ENST00000559100 PHF12Q96QT6 1004 aa5.65□□□□□ -1.5
GABPB1-209ENST00000559100 RNF166Q96A37 237 aaPredicted RBP5.63□□□□□ -1.51
GABPB1-209ENST00000559100 POTEFA5A3E0 1075 aa5.61□□□□□ -1.51
GABPB1-209ENST00000559100 SLAIN1Q8ND83 568 aa5.6□□□□□ -1.51
GABPB1-209ENST00000559100 MYCNP04198 464 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-209ENST00000559100 AMER1Q5JTC6 1135 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-209ENST00000559100 RTN4Q9NQC3 1192 aaKnown RBP5.58□□□□□ -1.52
GABPB1-209ENST00000559100 ATF5Q9Y2D1 282 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-209ENST00000559100 FKBP8Q14318 412 aa5.56□□□□□ -1.52
GABPB1-209ENST00000559100 SLC24A1O60721 1099 aa5.55□□□□□ -1.52
GABPB1-209ENST00000559100 ATXN8OSP0DMR3 200 aa5.55□□□□□ -1.52
GABPB1-209ENST00000559100 ATN1P54259 1190 aaPredicted RBP5.54□□□□□ -1.52
GABPB1-209ENST00000559100 SSUH2Q9Y2M2 353 aa5.54□□□□□ -1.52
GABPB1-209ENST00000559100 MS4A3Q96HJ5 214 aa5.53□□□□□ -1.52
GABPB1-209ENST00000559100 PAK3O75914 559 aaPredicted RBP5.52□□□□□ -1.53
GABPB1-209ENST00000559100 EMP3P54852 163 aa5.51□□□□□ -1.53
GABPB1-209ENST00000559100 ZNF692Q9BU19 519 aaPredicted RBP5.5□□□□□ -1.53
GABPB1-209ENST00000559100 HS3ST6Q96QI5 342 aa5.49□□□□□ -1.53
GABPB1-209ENST00000559100 POTEB3A0JP26 581 aa5.48□□□□□ -1.53
GABPB1-209ENST00000559100 POTEBQ6S5H4 581 aa5.48□□□□□ -1.53
GABPB1-209ENST00000559100 MYT1LQ9UL68 1186 aa5.46□□□□□ -1.54
GABPB1-209ENST00000559100 COLQQ9Y215 455 aaPredicted RBP5.46□□□□□ -1.54
GABPB1-209ENST00000559100 SNPHO15079 494 aa5.45□□□□□ -1.54
GABPB1-209ENST00000559100 SEC24BO95487 1268 aa5.45□□□□□ -1.54
GABPB1-209ENST00000559100 FAM205CA6NFA0 338 aa5.43□□□□□ -1.54
GABPB1-209ENST00000559100 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
GABPB1-209ENST00000559100 FBLN2P98095 1184 aa5.4□□□□□ -1.54
GABPB1-209ENST00000559100 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
GABPB1-209ENST00000559100 PABPN1Q86U42 306 aaKnown RBP eCLIP5.39□□□□□ -1.55
GABPB1-209ENST00000559100 PLA2G2EQ9NZK7 142 aa5.39□□□□□ -1.55
GABPB1-209ENST00000559100 BMP2KQ9NSY1 1161 aaPredicted RBP5.36□□□□□ -1.55
GABPB1-209ENST00000559100 IRX2Q9BZI1 471 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-209ENST00000559100 CREBZFQ9NS37 354 aa5.31□□□□□ -1.56
GABPB1-209ENST00000559100 FBXO3Q9UK99 471 aa5.27□□□□□ -1.57
GABPB1-209ENST00000559100 TRPC6Q9Y210 931 aa5.26□□□□□ -1.57
GABPB1-209ENST00000559100 SPDYE4A6NLX3 237 aa5.25□□□□□ -1.57
GABPB1-209ENST00000559100 IER5LQ5T953 404 aa5.24□□□□□ -1.57
GABPB1-209ENST00000559100 DCAF8L2P0C7V8 631 aa5.23□□□□□ -1.57
GABPB1-209ENST00000559100 TIE1P35590 1138 aa5.23□□□□□ -1.57
GABPB1-209ENST00000559100 PTGER2P43116 358 aa5.23□□□□□ -1.57
GABPB1-209ENST00000559100 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.21□□□□□ -1.58
GABPB1-209ENST00000559100 MKRN4PQ13434 485 aaPredicted RBP5.2□□□□□ -1.58
GABPB1-209ENST00000559100 TTLL13PA6NNM8 815 aa5.19□□□□□ -1.58
GABPB1-209ENST00000559100 Q6ZNB5 142 aa5.18□□□□□ -1.58
GABPB1-209ENST00000559100 NPM1P06748 294 aaKnown RBP eCLIP5.17□□□□□ -1.58
GABPB1-209ENST00000559100 PLCG2P16885 1265 aa5.17□□□□□ -1.58
GABPB1-209ENST00000559100 VASPP50552 380 aaPredicted RBP5.17□□□□□ -1.58
GABPB1-209ENST00000559100 TRIM35Q9UPQ4 493 aa5.17□□□□□ -1.58
GABPB1-209ENST00000559100 HAP1P54257 671 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-209ENST00000559100 RGS20O76081 388 aa5.13□□□□□ -1.59
GABPB1-209ENST00000559100 PLCB2Q00722 1185 aa5.13□□□□□ -1.59
GABPB1-209ENST00000559100 KIF12Q96FN5 646 aa5.12□□□□□ -1.59
GABPB1-209ENST00000559100 ERBB3P21860 1342 aa5.12□□□□□ -1.59
GABPB1-209ENST00000559100 IFNLR1Q8IU57 520 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-209ENST00000559100 KLHL34Q8N239 644 aa5.09□□□□□ -1.59
GABPB1-209ENST00000559100 PROM2Q8N271 834 aa5.09□□□□□ -1.59
GABPB1-209ENST00000559100 HCSTQ9UBK5 93 aa5.09□□□□□ -1.59
GABPB1-209ENST00000559100 TSPYL2Q9H2G4 693 aaPredicted RBP5.07□□□□□ -1.6
GABPB1-209ENST00000559100 CCDC61Q9Y6R9 512 aa5.07□□□□□ -1.6
GABPB1-209ENST00000559100 VARS2Q5ST30 1063 aaKnown RBP5.05□□□□□ -1.6
GABPB1-209ENST00000559100 MAP3K13O43283 966 aa5.04□□□□□ -1.6
GABPB1-209ENST00000559100 MNX1P50219 401 aaPredicted RBP5.04□□□□□ -1.6
GABPB1-209ENST00000559100 PKD2Q13563 968 aa5.04□□□□□ -1.6
GABPB1-209ENST00000559100 ANKRD13DQ6ZTN6 518 aa5.04□□□□□ -1.6
GABPB1-209ENST00000559100 IRX5P78411 483 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-209ENST00000559100 SPOCK2Q92563 424 aa5.03□□□□□ -1.6
GABPB1-209ENST00000559100 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-209ENST00000559100 ECM2O94769 699 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-209ENST00000559100 PLCD3Q8N3E9 789 aa5.02□□□□□ -1.61
GABPB1-209ENST00000559100 HOXB1P14653 301 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-209ENST00000559100 C3orf67Q6ZVT6 689 aa5.01□□□□□ -1.61
GABPB1-209ENST00000559100 BCANQ96GW7 911 aa5.01□□□□□ -1.61
GABPB1-209ENST00000559100 ZNF687Q8N1G0 1237 aa5□□□□□ -1.61
GABPB1-209ENST00000559100 LCE2BO14633 110 aa4.99□□□□□ -1.61
GABPB1-209ENST00000559100 VSIG10Q8N0Z9 540 aa4.99□□□□□ -1.61
GABPB1-209ENST00000559100 CFAP44Q96MT7 982 aa4.99□□□□□ -1.61
GABPB1-209ENST00000559100 STAG3Q9UJ98 1225 aa4.99□□□□□ -1.61
GABPB1-209ENST00000559100 PAXIP1Q6ZW49 1069 aaPredicted RBP4.98□□□□□ -1.61
GABPB1-209ENST00000559100 ZNF775Q96BV0 537 aaPredicted RBP4.98□□□□□ -1.61
GABPB1-209ENST00000559100 OCEL1Q9H607 264 aa4.98□□□□□ -1.61
GABPB1-209ENST00000559100 MIER1Q8N108 512 aa4.97□□□□□ -1.61
GABPB1-209ENST00000559100 BBXQ8WY36 941 aaPredicted RBP4.97□□□□□ -1.61
GABPB1-209ENST00000559100 PLEKHG5O94827 1062 aa4.96□□□□□ -1.62
GABPB1-209ENST00000559100 TRAF7Q6Q0C0 670 aa4.95□□□□□ -1.62
GABPB1-209ENST00000559100 ZNF710Q8N1W2 664 aa4.95□□□□□ -1.62
GABPB1-209ENST00000559100 CIZ1Q9ULV3 898 aaPredicted RBP4.95□□□□□ -1.62
GABPB1-209ENST00000559100 HOXB3P14651 431 aaPredicted RBP4.94□□□□□ -1.62
GABPB1-209ENST00000559100 PRKCSHP14314 528 aaPredicted RBP4.93□□□□□ -1.62
GABPB1-209ENST00000559100 RGL2O15211 777 aa4.92□□□□□ -1.62
GABPB1-209ENST00000559100 TAOK2Q9UL54 1235 aa4.92□□□□□ -1.62
GABPB1-209ENST00000559100 CHGAP10645 457 aaKnown RBP4.91□□□□□ -1.62
GABPB1-209ENST00000559100 LSM11P83369 360 aaKnown RBP eCLIP4.91□□□□□ -1.62
GABPB1-209ENST00000559100 SPRYD3Q8NCJ5 442 aa4.91□□□□□ -1.62
GABPB1-209ENST00000559100 ZBTB47Q9UFB7 747 aaPredicted RBP4.91□□□□□ -1.62
GABPB1-209ENST00000559100 A0A0G2JS52 829 aa4.9□□□□□ -1.63
GABPB1-209ENST00000559100 SUZ12Q15022 739 aaKnown RBP4.9□□□□□ -1.63
GABPB1-209ENST00000559100 ZNF787Q6DD87 383 aa4.9□□□□□ -1.63
GABPB1-209ENST00000559100 TMEM106CQ9BVX2 250 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms