RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 LHX8Q68G74 356 aa11.93□□□□□ -0.5
SPG21-208ENST00000558943 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
SPG21-208ENST00000558943 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
SPG21-208ENST00000558943 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
SPG21-208ENST00000558943 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
SPG21-208ENST00000558943 NUBP1P53384 320 aa11.84□□□□□ -0.51
SPG21-208ENST00000558943 ASTLQ6HA08 431 aaPredicted RBP11.83□□□□□ -0.52
SPG21-208ENST00000558943 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
SPG21-208ENST00000558943 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
SPG21-208ENST00000558943 ATMINO43313 823 aaPredicted RBP11.77□□□□□ -0.53
SPG21-208ENST00000558943 VASPP50552 380 aaPredicted RBP11.77□□□□□ -0.53
SPG21-208ENST00000558943 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
SPG21-208ENST00000558943 MAP3K13O43283 966 aa11.75□□□□□ -0.53
SPG21-208ENST00000558943 TIE1P35590 1138 aa11.75□□□□□ -0.53
SPG21-208ENST00000558943 C7P10643 843 aa11.74□□□□□ -0.53
SPG21-208ENST00000558943 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
SPG21-208ENST00000558943 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
SPG21-208ENST00000558943 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
SPG21-208ENST00000558943 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
SPG21-208ENST00000558943 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
SPG21-208ENST00000558943 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
SPG21-208ENST00000558943 GSE1Q14687 1217 aa11.65□□□□□ -0.54
SPG21-208ENST00000558943 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
SPG21-208ENST00000558943 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
SPG21-208ENST00000558943 IER5LQ5T953 404 aa11.6□□□□□ -0.55
SPG21-208ENST00000558943 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
SPG21-208ENST00000558943 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
SPG21-208ENST00000558943 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
SPG21-208ENST00000558943 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
SPG21-208ENST00000558943 OTUD5Q96G74 571 aa11.56□□□□□ -0.56
SPG21-208ENST00000558943 CHRM1P11229 460 aaPredicted RBP11.55□□□□□ -0.56
SPG21-208ENST00000558943 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
SPG21-208ENST00000558943 PYGBP11216 843 aa11.53□□□□□ -0.56
SPG21-208ENST00000558943 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
SPG21-208ENST00000558943 ABCC9O60706 1549 aa11.52□□□□□ -0.57
SPG21-208ENST00000558943 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
SPG21-208ENST00000558943 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
SPG21-208ENST00000558943 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
SPG21-208ENST00000558943 SEC24BO95487 1268 aa11.49□□□□□ -0.57
SPG21-208ENST00000558943 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
SPG21-208ENST00000558943 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
SPG21-208ENST00000558943 POTEJP0CG39 1038 aa11.44□□□□□ -0.58
SPG21-208ENST00000558943 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
SPG21-208ENST00000558943 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
SPG21-208ENST00000558943 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
SPG21-208ENST00000558943 PLCG2P16885 1265 aa11.4□□□□□ -0.58
SPG21-208ENST00000558943 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
SPG21-208ENST00000558943 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
SPG21-208ENST00000558943 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
SPG21-208ENST00000558943 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
SPG21-208ENST00000558943 PSEN1P49768 467 aa11.33□□□□□ -0.6
SPG21-208ENST00000558943 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
SPG21-208ENST00000558943 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
SPG21-208ENST00000558943 L3MBTL3Q96JM7 780 aaPredicted RBP11.22□□□□□ -0.61
SPG21-208ENST00000558943 POTEMA6NI47 508 aa11.21□□□□□ -0.61
SPG21-208ENST00000558943 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
SPG21-208ENST00000558943 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
SPG21-208ENST00000558943 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
SPG21-208ENST00000558943 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
SPG21-208ENST00000558943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPG21-208ENST00000558943 POTEGQ6S5H5 508 aa11.19□□□□□ -0.62
SPG21-208ENST00000558943 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
SPG21-208ENST00000558943 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
SPG21-208ENST00000558943 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
SPG21-208ENST00000558943 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
SPG21-208ENST00000558943 TAOK2Q9UL54 1235 aa11.15□□□□□ -0.62
SPG21-208ENST00000558943 SNPHO15079 494 aa11.14□□□□□ -0.63
SPG21-208ENST00000558943 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
SPG21-208ENST00000558943 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
SPG21-208ENST00000558943 LCE2DQ5TA82 110 aaPredicted RBP11.13□□□□□ -0.63
SPG21-208ENST00000558943 G3V3G9 751 aa11.08□□□□□ -0.64
SPG21-208ENST00000558943 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
SPG21-208ENST00000558943 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
SPG21-208ENST00000558943 SOX12O15370 315 aa11.06□□□□□ -0.64
SPG21-208ENST00000558943 EFCAB3Q8N7B9 438 aa11.04□□□□□ -0.64
SPG21-208ENST00000558943 BOLA1Q9Y3E2 137 aa11.04□□□□□ -0.64
SPG21-208ENST00000558943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
SPG21-208ENST00000558943 ST18O60284 1047 aa11.02□□□□□ -0.65
SPG21-208ENST00000558943 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
SPG21-208ENST00000558943 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
SPG21-208ENST00000558943 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
SPG21-208ENST00000558943 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
SPG21-208ENST00000558943 NLRP6P59044 892 aa10.92□□□□□ -0.66
SPG21-208ENST00000558943 PKD2Q13563 968 aa10.92□□□□□ -0.66
SPG21-208ENST00000558943 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
SPG21-208ENST00000558943 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
SPG21-208ENST00000558943 CDAN1Q8IWY9 1227 aa10.89□□□□□ -0.67
SPG21-208ENST00000558943 MICALL2Q8IY33 904 aa10.89□□□□□ -0.67
SPG21-208ENST00000558943 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
SPG21-208ENST00000558943 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
SPG21-208ENST00000558943 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
SPG21-208ENST00000558943 STK25O00506 426 aa10.87□□□□□ -0.67
SPG21-208ENST00000558943 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
SPG21-208ENST00000558943 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
SPG21-208ENST00000558943 RGL2O15211 777 aa10.83□□□□□ -0.68
SPG21-208ENST00000558943 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
SPG21-208ENST00000558943 HOXB3P14651 431 aaPredicted RBP10.81□□□□□ -0.68
SPG21-208ENST00000558943 EMP3P54852 163 aa10.81□□□□□ -0.68
SPG21-208ENST00000558943 ZNF710Q8N1W2 664 aa10.8□□□□□ -0.68
SPG21-208ENST00000558943 MFRPQ9BY79 579 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms