RNA–Protein interactions for RNA: ENST00000558832.5

ZEB1-213, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-213ENST00000558832 DCAF8L2P0C7V8 631 aa13.34□□□□□ -0.27
ZEB1-213ENST00000558832 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
ZEB1-213ENST00000558832 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
ZEB1-213ENST00000558832 RNF25Q96BH1 459 aaPredicted RBP13.3□□□□□ -0.28
ZEB1-213ENST00000558832 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
ZEB1-213ENST00000558832 PYGBP11216 843 aa13.25□□□□□ -0.29
ZEB1-213ENST00000558832 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
ZEB1-213ENST00000558832 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
ZEB1-213ENST00000558832 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
ZEB1-213ENST00000558832 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
ZEB1-213ENST00000558832 RIOK3O14730 519 aaKnown RBP13.16□□□□□ -0.3
ZEB1-213ENST00000558832 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
ZEB1-213ENST00000558832 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
ZEB1-213ENST00000558832 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
ZEB1-213ENST00000558832 BBXQ8WY36 941 aaPredicted RBP13.09□□□□□ -0.31
ZEB1-213ENST00000558832 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
ZEB1-213ENST00000558832 MAP3K13O43283 966 aa13.08□□□□□ -0.32
ZEB1-213ENST00000558832 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
ZEB1-213ENST00000558832 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
ZEB1-213ENST00000558832 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
ZEB1-213ENST00000558832 VGFO15240 615 aaPredicted RBP13.06□□□□□ -0.32
ZEB1-213ENST00000558832 EVX2Q03828 476 aa13.06□□□□□ -0.32
ZEB1-213ENST00000558832 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
ZEB1-213ENST00000558832 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
ZEB1-213ENST00000558832 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
ZEB1-213ENST00000558832 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
ZEB1-213ENST00000558832 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
ZEB1-213ENST00000558832 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.02□□□□□ -0.33
ZEB1-213ENST00000558832 HAX1O00165 279 aa13.02□□□□□ -0.33
ZEB1-213ENST00000558832 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
ZEB1-213ENST00000558832 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
ZEB1-213ENST00000558832 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
ZEB1-213ENST00000558832 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
ZEB1-213ENST00000558832 STK25O00506 426 aa12.97□□□□□ -0.33
ZEB1-213ENST00000558832 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
ZEB1-213ENST00000558832 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
ZEB1-213ENST00000558832 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
ZEB1-213ENST00000558832 PAXIP1Q6ZW49 1069 aaPredicted RBP12.94□□□□□ -0.34
ZEB1-213ENST00000558832 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
ZEB1-213ENST00000558832 PSEN1P49768 467 aa12.93□□□□□ -0.34
ZEB1-213ENST00000558832 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
ZEB1-213ENST00000558832 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
ZEB1-213ENST00000558832 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
ZEB1-213ENST00000558832 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
ZEB1-213ENST00000558832 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
ZEB1-213ENST00000558832 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
ZEB1-213ENST00000558832 NISCHQ9Y2I1 1504 aa12.85□□□□□ -0.35
ZEB1-213ENST00000558832 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
ZEB1-213ENST00000558832 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
ZEB1-213ENST00000558832 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
ZEB1-213ENST00000558832 TMEM106CQ9BVX2 250 aa12.77□□□□□ -0.37
ZEB1-213ENST00000558832 CABP2Q9NPB3 220 aa12.77□□□□□ -0.37
ZEB1-213ENST00000558832 TIE1P35590 1138 aa12.75□□□□□ -0.37
ZEB1-213ENST00000558832 CLCN6P51797 869 aa12.75□□□□□ -0.37
ZEB1-213ENST00000558832 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
ZEB1-213ENST00000558832 GABBR2O75899 941 aa12.74□□□□□ -0.37
ZEB1-213ENST00000558832 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
ZEB1-213ENST00000558832 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
ZEB1-213ENST00000558832 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
ZEB1-213ENST00000558832 TTLL13PA6NNM8 815 aa12.73□□□□□ -0.37
ZEB1-213ENST00000558832 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
ZEB1-213ENST00000558832 FBXO22Q8NEZ5 403 aa12.67□□□□□ -0.38
ZEB1-213ENST00000558832 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
ZEB1-213ENST00000558832 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
ZEB1-213ENST00000558832 SOX12O15370 315 aa12.64□□□□□ -0.39
ZEB1-213ENST00000558832 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
ZEB1-213ENST00000558832 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
ZEB1-213ENST00000558832 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
ZEB1-213ENST00000558832 RYDENQ9NUL5 291 aaKnown RBP12.62□□□□□ -0.39
ZEB1-213ENST00000558832 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
ZEB1-213ENST00000558832 NLRP6P59044 892 aa12.6□□□□□ -0.39
ZEB1-213ENST00000558832 PPP1R37O75864 691 aa12.59□□□□□ -0.39
ZEB1-213ENST00000558832 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
ZEB1-213ENST00000558832 BCANQ96GW7 911 aa12.59□□□□□ -0.39
ZEB1-213ENST00000558832 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.4
ZEB1-213ENST00000558832 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
ZEB1-213ENST00000558832 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
ZEB1-213ENST00000558832 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
ZEB1-213ENST00000558832 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
ZEB1-213ENST00000558832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.51□□□□□ -0.41
ZEB1-213ENST00000558832 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
ZEB1-213ENST00000558832 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
ZEB1-213ENST00000558832 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
ZEB1-213ENST00000558832 IER5LQ5T953 404 aa12.47□□□□□ -0.41
ZEB1-213ENST00000558832 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
ZEB1-213ENST00000558832 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
ZEB1-213ENST00000558832 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
ZEB1-213ENST00000558832 OCEL1Q9H607 264 aa12.41□□□□□ -0.42
ZEB1-213ENST00000558832 SLC39A7Q92504 469 aa12.38□□□□□ -0.43
ZEB1-213ENST00000558832 C7P10643 843 aa12.35□□□□□ -0.43
ZEB1-213ENST00000558832 PLCG2P16885 1265 aa12.35□□□□□ -0.43
ZEB1-213ENST00000558832 METRNQ9UJH8 293 aa12.35□□□□□ -0.43
ZEB1-213ENST00000558832 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
ZEB1-213ENST00000558832 NCKAP5LQ9HCH0 1330 aa12.32□□□□□ -0.44
ZEB1-213ENST00000558832 SEC24BO95487 1268 aa12.31□□□□□ -0.44
ZEB1-213ENST00000558832 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
ZEB1-213ENST00000558832 CRISPLD2Q9H0B8 497 aa12.29□□□□□ -0.44
ZEB1-213ENST00000558832 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
ZEB1-213ENST00000558832 NBR1Q14596 966 aa12.26□□□□□ -0.45
ZEB1-213ENST00000558832 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms