RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 WDR43Q15061 677 aaKnown RBP eCLIP18.51■□□□□ 0.55
SEMA6D-208ENST00000558014 GTF3C3Q9Y5Q9 886 aa18.48■□□□□ 0.55
SEMA6D-208ENST00000558014 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
SEMA6D-208ENST00000558014 HSP90AA1P07900 732 aaKnown RBP18.47■□□□□ 0.55
SEMA6D-208ENST00000558014 NACADO15069 1562 aa18.46■□□□□ 0.55
SEMA6D-208ENST00000558014 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
SEMA6D-208ENST00000558014 NPHP1O15259 732 aa18.43■□□□□ 0.54
SEMA6D-208ENST00000558014 SOX12O15370 315 aa18.4■□□□□ 0.54
SEMA6D-208ENST00000558014 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
SEMA6D-208ENST00000558014 POGKQ9P215 609 aa18.37■□□□□ 0.53
SEMA6D-208ENST00000558014 TNNT2P45379 298 aaPredicted RBP18.34■□□□□ 0.53
SEMA6D-208ENST00000558014 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
SEMA6D-208ENST00000558014 TULP1O00294 542 aaPredicted RBP18.31■□□□□ 0.52
SEMA6D-208ENST00000558014 LAS1LQ9Y4W2 734 aaKnown RBP18.31■□□□□ 0.52
SEMA6D-208ENST00000558014 CLIP1P30622 1438 aa18.3■□□□□ 0.52
SEMA6D-208ENST00000558014 FKBP8Q14318 412 aa18.3■□□□□ 0.52
SEMA6D-208ENST00000558014 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
SEMA6D-208ENST00000558014 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
SEMA6D-208ENST00000558014 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
SEMA6D-208ENST00000558014 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
SEMA6D-208ENST00000558014 ANP32AP39687 249 aaKnown RBP18.28■□□□□ 0.52
SEMA6D-208ENST00000558014 GGT6Q6P531 493 aa18.27■□□□□ 0.51
SEMA6D-208ENST00000558014 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
SEMA6D-208ENST00000558014 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
SEMA6D-208ENST00000558014 UPF2Q9HAU5 1272 aaKnown RBP18.24■□□□□ 0.51
SEMA6D-208ENST00000558014 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
SEMA6D-208ENST00000558014 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
SEMA6D-208ENST00000558014 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.5
SEMA6D-208ENST00000558014 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
SEMA6D-208ENST00000558014 STK26Q9P289 416 aa18.17■□□□□ 0.5
SEMA6D-208ENST00000558014 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
SEMA6D-208ENST00000558014 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
SEMA6D-208ENST00000558014 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
SEMA6D-208ENST00000558014 CCDC9Q9Y3X0 531 aaKnown RBP18.15■□□□□ 0.5
SEMA6D-208ENST00000558014 CCDC136Q96JN2 1154 aa18.15■□□□□ 0.5
SEMA6D-208ENST00000558014 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
SEMA6D-208ENST00000558014 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
SEMA6D-208ENST00000558014 KIF27Q86VH2 1401 aa18.13■□□□□ 0.49
SEMA6D-208ENST00000558014 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
SEMA6D-208ENST00000558014 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
SEMA6D-208ENST00000558014 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
SEMA6D-208ENST00000558014 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
SEMA6D-208ENST00000558014 EEA1Q15075 1411 aa18.09■□□□□ 0.49
SEMA6D-208ENST00000558014 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.49
SEMA6D-208ENST00000558014 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.48
SEMA6D-208ENST00000558014 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.48
SEMA6D-208ENST00000558014 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
SEMA6D-208ENST00000558014 MAPK8IP3Q9UPT6 1336 aa18.06■□□□□ 0.48
SEMA6D-208ENST00000558014 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
SEMA6D-208ENST00000558014 ANP32BQ92688 251 aaKnown RBP18.06■□□□□ 0.48
SEMA6D-208ENST00000558014 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
SEMA6D-208ENST00000558014 DCAF11Q8TEB1 546 aa18.03■□□□□ 0.48
SEMA6D-208ENST00000558014 CSB-PGBD3P0DP91 1061 aa18.03■□□□□ 0.48
SEMA6D-208ENST00000558014 GOLGA3Q08378 1498 aa18.03■□□□□ 0.48
SEMA6D-208ENST00000558014 HDGFP51858 240 aaKnown RBP18.02■□□□□ 0.48
SEMA6D-208ENST00000558014 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.48
SEMA6D-208ENST00000558014 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.47
SEMA6D-208ENST00000558014 CDK11BP21127 795 aaKnown RBP18.02■□□□□ 0.47
SEMA6D-208ENST00000558014 KANK1Q14678 1352 aa18.01■□□□□ 0.47
SEMA6D-208ENST00000558014 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
SEMA6D-208ENST00000558014 CUX2O14529 1486 aa18.01■□□□□ 0.47
SEMA6D-208ENST00000558014 CEP162Q5TB80 1403 aa18■□□□□ 0.47
SEMA6D-208ENST00000558014 GOLGA2Q08379 1002 aa17.99■□□□□ 0.47
SEMA6D-208ENST00000558014 TDRD9Q8NDG6 1382 aaKnown RBP17.98■□□□□ 0.47
SEMA6D-208ENST00000558014 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
SEMA6D-208ENST00000558014 OS9Q13438 667 aaPredicted RBP17.97■□□□□ 0.47
SEMA6D-208ENST00000558014 NUDCQ9Y266 331 aa17.97■□□□□ 0.47
SEMA6D-208ENST00000558014 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
SEMA6D-208ENST00000558014 ACIN1Q9UKV3 1341 aaKnown RBP17.96■□□□□ 0.47
SEMA6D-208ENST00000558014 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.47
SEMA6D-208ENST00000558014 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
SEMA6D-208ENST00000558014 FOXD1Q16676 465 aa17.94■□□□□ 0.46
SEMA6D-208ENST00000558014 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
SEMA6D-208ENST00000558014 NBR1Q14596 966 aa17.9■□□□□ 0.46
SEMA6D-208ENST00000558014 MIER1Q8N108 512 aa17.9■□□□□ 0.46
SEMA6D-208ENST00000558014 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.46
SEMA6D-208ENST00000558014 NAP1L2Q9ULW6 460 aaPredicted RBP17.89■□□□□ 0.46
SEMA6D-208ENST00000558014 KIF3BO15066 747 aa17.86■□□□□ 0.45
SEMA6D-208ENST00000558014 PDS5BQ9NTI5 1447 aa17.85■□□□□ 0.45
SEMA6D-208ENST00000558014 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
SEMA6D-208ENST00000558014 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.44
SEMA6D-208ENST00000558014 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.44
SEMA6D-208ENST00000558014 MORC1Q86VD1 984 aa17.83■□□□□ 0.44
SEMA6D-208ENST00000558014 SOGA1O94964 1423 aa17.83■□□□□ 0.44
SEMA6D-208ENST00000558014 TMF1P82094 1093 aa17.81■□□□□ 0.44
SEMA6D-208ENST00000558014 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.81■□□□□ 0.44
SEMA6D-208ENST00000558014 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
SEMA6D-208ENST00000558014 EID1Q9Y6B2 187 aa17.81■□□□□ 0.44
SEMA6D-208ENST00000558014 PKD2Q13563 968 aa17.81■□□□□ 0.44
SEMA6D-208ENST00000558014 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
SEMA6D-208ENST00000558014 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
SEMA6D-208ENST00000558014 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
SEMA6D-208ENST00000558014 LTV1Q96GA3 475 aaPredicted RBP17.8■□□□□ 0.44
SEMA6D-208ENST00000558014 FGD1P98174 961 aa17.8■□□□□ 0.44
SEMA6D-208ENST00000558014 WASHC2CQ9Y4E1 1318 aa17.78■□□□□ 0.44
SEMA6D-208ENST00000558014 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
SEMA6D-208ENST00000558014 KCNJ4P48050 445 aa17.77■□□□□ 0.44
SEMA6D-208ENST00000558014 APBB1O00213 710 aa17.77■□□□□ 0.44
SEMA6D-208ENST00000558014 CASC1Q6TDU7 716 aa17.77■□□□□ 0.44
SEMA6D-208ENST00000558014 HDGFL2Q7Z4V5 671 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms