RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 POTEJP0CG39 1038 aa9.96□□□□□ -0.82
GPHN-216ENST00000557678 PLCD3Q8N3E9 789 aa9.95□□□□□ -0.82
GPHN-216ENST00000557678 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
GPHN-216ENST00000557678 CLCN6P51797 869 aa9.92□□□□□ -0.82
GPHN-216ENST00000557678 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
GPHN-216ENST00000557678 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
GPHN-216ENST00000557678 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
GPHN-216ENST00000557678 MS4A3Q96HJ5 214 aa9.82□□□□□ -0.84
GPHN-216ENST00000557678 ZBTB47Q9UFB7 747 aaPredicted RBP9.82□□□□□ -0.84
GPHN-216ENST00000557678 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
GPHN-216ENST00000557678 ATMINO43313 823 aaPredicted RBP9.76□□□□□ -0.85
GPHN-216ENST00000557678 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
GPHN-216ENST00000557678 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
GPHN-216ENST00000557678 POTEFA5A3E0 1075 aa9.73□□□□□ -0.85
GPHN-216ENST00000557678 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
GPHN-216ENST00000557678 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.86
GPHN-216ENST00000557678 TRPC6Q9Y210 931 aa9.7□□□□□ -0.86
GPHN-216ENST00000557678 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
GPHN-216ENST00000557678 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
GPHN-216ENST00000557678 FAM163AQ96GL9 167 aaPredicted RBP9.69□□□□□ -0.86
GPHN-216ENST00000557678 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
GPHN-216ENST00000557678 NUBP1P53384 320 aa9.67□□□□□ -0.86
GPHN-216ENST00000557678 SLC39A7Q92504 469 aa9.66□□□□□ -0.86
GPHN-216ENST00000557678 DCAF8Q5TAQ9 597 aa9.65□□□□□ -0.86
GPHN-216ENST00000557678 KIF12Q96FN5 646 aa9.65□□□□□ -0.86
GPHN-216ENST00000557678 C7P10643 843 aa9.64□□□□□ -0.87
GPHN-216ENST00000557678 MAP3K13O43283 966 aa9.63□□□□□ -0.87
GPHN-216ENST00000557678 PCDH10Q9P2E7 1040 aa9.61□□□□□ -0.87
GPHN-216ENST00000557678 BMP2KQ9NSY1 1161 aaPredicted RBP9.6□□□□□ -0.87
GPHN-216ENST00000557678 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.87
GPHN-216ENST00000557678 COLQQ9Y215 455 aaPredicted RBP9.57□□□□□ -0.88
GPHN-216ENST00000557678 PYGBP11216 843 aa9.55□□□□□ -0.88
GPHN-216ENST00000557678 MAMSTRQ6ZN01 415 aa9.54□□□□□ -0.88
GPHN-216ENST00000557678 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
GPHN-216ENST00000557678 GSE1Q14687 1217 aa9.52□□□□□ -0.89
GPHN-216ENST00000557678 IFNLR1Q8IU57 520 aaPredicted RBP9.52□□□□□ -0.89
GPHN-216ENST00000557678 IFNL1Q8IU54 200 aa9.51□□□□□ -0.89
GPHN-216ENST00000557678 CDAN1Q8IWY9 1227 aa9.51□□□□□ -0.89
GPHN-216ENST00000557678 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
GPHN-216ENST00000557678 SGIP1Q9BQI5 828 aa9.51□□□□□ -0.89
GPHN-216ENST00000557678 TIE1P35590 1138 aa9.5□□□□□ -0.89
GPHN-216ENST00000557678 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
GPHN-216ENST00000557678 TTLL13PA6NNM8 815 aa9.46□□□□□ -0.9
GPHN-216ENST00000557678 TMEM106CQ9BVX2 250 aa9.45□□□□□ -0.9
GPHN-216ENST00000557678 PCDHB8Q9UN66 801 aa9.45□□□□□ -0.9
GPHN-216ENST00000557678 SEC24BO95487 1268 aa9.43□□□□□ -0.9
GPHN-216ENST00000557678 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
GPHN-216ENST00000557678 ST18O60284 1047 aa9.42□□□□□ -0.9
GPHN-216ENST00000557678 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
GPHN-216ENST00000557678 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
GPHN-216ENST00000557678 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
GPHN-216ENST00000557678 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
GPHN-216ENST00000557678 IER5LQ5T953 404 aa9.34□□□□□ -0.91
GPHN-216ENST00000557678 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
GPHN-216ENST00000557678 PLCG2P16885 1265 aa9.32□□□□□ -0.92
GPHN-216ENST00000557678 SPNS2Q8IVW8 549 aa9.32□□□□□ -0.92
GPHN-216ENST00000557678 PSEN1P49768 467 aa9.31□□□□□ -0.92
GPHN-216ENST00000557678 MKRN3Q13064 507 aaKnown RBP9.28□□□□□ -0.92
GPHN-216ENST00000557678 PDAP1Q13442 181 aaKnown RBP9.28□□□□□ -0.92
GPHN-216ENST00000557678 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
GPHN-216ENST00000557678 MARVELD3Q96A59 401 aa9.27□□□□□ -0.93
GPHN-216ENST00000557678 OCEL1Q9H607 264 aa9.25□□□□□ -0.93
GPHN-216ENST00000557678 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
GPHN-216ENST00000557678 CABP2Q9NPB3 220 aa9.22□□□□□ -0.93
GPHN-216ENST00000557678 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
GPHN-216ENST00000557678 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
GPHN-216ENST00000557678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.94
GPHN-216ENST00000557678 RIOK3O14730 519 aaKnown RBP9.17□□□□□ -0.94
GPHN-216ENST00000557678 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.94
GPHN-216ENST00000557678 KRTAP3-2Q9BYR7 98 aa9.15□□□□□ -0.94
GPHN-216ENST00000557678 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
GPHN-216ENST00000557678 G3V3G9 751 aa9.13□□□□□ -0.95
GPHN-216ENST00000557678 L3MBTL3Q96JM7 780 aaPredicted RBP9.13□□□□□ -0.95
GPHN-216ENST00000557678 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.13□□□□□ -0.95
GPHN-216ENST00000557678 VGFO15240 615 aaPredicted RBP9.12□□□□□ -0.95
GPHN-216ENST00000557678 C3orf67Q6ZVT6 689 aa9.12□□□□□ -0.95
GPHN-216ENST00000557678 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
GPHN-216ENST00000557678 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
GPHN-216ENST00000557678 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.11□□□□□ -0.95
GPHN-216ENST00000557678 ZFP91Q96JP5 570 aaPredicted RBP9.11□□□□□ -0.95
GPHN-216ENST00000557678 EFCAB3Q8N7B9 438 aa9.1□□□□□ -0.95
GPHN-216ENST00000557678 TAOK2Q9UL54 1235 aa9.1□□□□□ -0.95
GPHN-216ENST00000557678 TMEM121BQ9BXQ6 578 aaPredicted RBP9.09□□□□□ -0.95
GPHN-216ENST00000557678 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
GPHN-216ENST00000557678 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
GPHN-216ENST00000557678 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
GPHN-216ENST00000557678 EMP3P54852 163 aa9.04□□□□□ -0.96
GPHN-216ENST00000557678 PKD2Q13563 968 aa9.04□□□□□ -0.96
GPHN-216ENST00000557678 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
GPHN-216ENST00000557678 STK25O00506 426 aa9.03□□□□□ -0.96
GPHN-216ENST00000557678 BOLA1Q9Y3E2 137 aa9.03□□□□□ -0.96
GPHN-216ENST00000557678 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
GPHN-216ENST00000557678 RGL2O15211 777 aa9.01□□□□□ -0.97
GPHN-216ENST00000557678 ILDR1Q86SU0 546 aaPredicted RBP9.01□□□□□ -0.97
GPHN-216ENST00000557678 SNPHO15079 494 aa9□□□□□ -0.97
GPHN-216ENST00000557678 SOX12O15370 315 aa9□□□□□ -0.97
GPHN-216ENST00000557678 PHF8Q9UPP1 1060 aa8.99□□□□□ -0.97
GPHN-216ENST00000557678 NLRP6P59044 892 aa8.95□□□□□ -0.98
GPHN-216ENST00000557678 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
GPHN-216ENST00000557678 MS4A4AQ96JQ5 239 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms