RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 CIZ1Q9ULV3 898 aaPredicted RBP14.78□□□□□ -0.04
GPHN-215ENST00000557654 CCDC61Q9Y6R9 512 aa14.78□□□□□ -0.04
GPHN-215ENST00000557654 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
GPHN-215ENST00000557654 SP7Q8TDD2 431 aaPredicted RBP14.74□□□□□ -0.05
GPHN-215ENST00000557654 GSE1Q14687 1217 aa14.72□□□□□ -0.05
GPHN-215ENST00000557654 PYGBP11216 843 aa14.69□□□□□ -0.06
GPHN-215ENST00000557654 GABBR2O75899 941 aa14.65□□□□□ -0.06
GPHN-215ENST00000557654 KIF12Q96FN5 646 aa14.65□□□□□ -0.06
GPHN-215ENST00000557654 MAP3K13O43283 966 aa14.63□□□□□ -0.07
GPHN-215ENST00000557654 PKD2Q13563 968 aa14.61□□□□□ -0.07
GPHN-215ENST00000557654 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
GPHN-215ENST00000557654 MS4A3Q96HJ5 214 aa14.59□□□□□ -0.07
GPHN-215ENST00000557654 PCDHB13Q9Y5F0 798 aa14.55□□□□□ -0.08
GPHN-215ENST00000557654 CHRM1P11229 460 aaPredicted RBP14.52□□□□□ -0.09
GPHN-215ENST00000557654 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
GPHN-215ENST00000557654 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
GPHN-215ENST00000557654 PCDHB8Q9UN66 801 aa14.51□□□□□ -0.09
GPHN-215ENST00000557654 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
GPHN-215ENST00000557654 CLCN6P51797 869 aa14.48□□□□□ -0.09
GPHN-215ENST00000557654 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
GPHN-215ENST00000557654 RTN4Q9NQC3 1192 aaKnown RBP14.48□□□□□ -0.09
GPHN-215ENST00000557654 RNF25Q96BH1 459 aaPredicted RBP14.46□□□□□ -0.09
GPHN-215ENST00000557654 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
GPHN-215ENST00000557654 RGL2O15211 777 aa14.42□□□□□ -0.1
GPHN-215ENST00000557654 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
GPHN-215ENST00000557654 ZNF467Q7Z7K2 595 aaPredicted RBP14.39□□□□□ -0.11
GPHN-215ENST00000557654 POTEIP0CG38 1075 aa14.38□□□□□ -0.11
GPHN-215ENST00000557654 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
GPHN-215ENST00000557654 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
GPHN-215ENST00000557654 BMP2KQ9NSY1 1161 aaPredicted RBP14.35□□□□□ -0.11
GPHN-215ENST00000557654 TIE1P35590 1138 aa14.31□□□□□ -0.12
GPHN-215ENST00000557654 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
GPHN-215ENST00000557654 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
GPHN-215ENST00000557654 PSEN1P49768 467 aa14.3□□□□□ -0.12
GPHN-215ENST00000557654 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
GPHN-215ENST00000557654 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
GPHN-215ENST00000557654 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
GPHN-215ENST00000557654 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
GPHN-215ENST00000557654 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
GPHN-215ENST00000557654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
GPHN-215ENST00000557654 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
GPHN-215ENST00000557654 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
GPHN-215ENST00000557654 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
GPHN-215ENST00000557654 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
GPHN-215ENST00000557654 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
GPHN-215ENST00000557654 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
GPHN-215ENST00000557654 STK25O00506 426 aa14.14□□□□□ -0.15
GPHN-215ENST00000557654 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
GPHN-215ENST00000557654 STK24Q9Y6E0 443 aa14.12□□□□□ -0.15
GPHN-215ENST00000557654 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
GPHN-215ENST00000557654 GOLGA2Q08379 1002 aa14.08□□□□□ -0.16
GPHN-215ENST00000557654 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
GPHN-215ENST00000557654 EFCAB3Q8N7B9 438 aa14.07□□□□□ -0.16
GPHN-215ENST00000557654 SLC39A7Q92504 469 aa14.07□□□□□ -0.16
GPHN-215ENST00000557654 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
GPHN-215ENST00000557654 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
GPHN-215ENST00000557654 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
GPHN-215ENST00000557654 C7P10643 843 aa14.03□□□□□ -0.16
GPHN-215ENST00000557654 COLQQ9Y215 455 aaPredicted RBP14.03□□□□□ -0.16
GPHN-215ENST00000557654 IER5LQ5T953 404 aa14.01□□□□□ -0.17
GPHN-215ENST00000557654 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
GPHN-215ENST00000557654 SEC24BO95487 1268 aa13.98□□□□□ -0.17
GPHN-215ENST00000557654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■■□ 20.1
GPHN-215ENST00000557654 POTEB2H3BUK9 544 aa13.95□□□□□ -0.18
GPHN-215ENST00000557654 PHF8Q9UPP1 1060 aa13.95□□□□□ -0.18
GPHN-215ENST00000557654 PLCG2P16885 1265 aa13.94□□□□□ -0.18
GPHN-215ENST00000557654 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
GPHN-215ENST00000557654 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
GPHN-215ENST00000557654 OCEL1Q9H607 264 aa13.92□□□□□ -0.18
GPHN-215ENST00000557654 MFRPQ9BY79 579 aa13.91□□□□□ -0.18
GPHN-215ENST00000557654 SOX12O15370 315 aa13.9□□□□□ -0.18
GPHN-215ENST00000557654 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
GPHN-215ENST00000557654 ILDR1Q86SU0 546 aaPredicted RBP13.89□□□□□ -0.19
GPHN-215ENST00000557654 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
GPHN-215ENST00000557654 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
GPHN-215ENST00000557654 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
GPHN-215ENST00000557654 LHX8Q68G74 356 aa13.85□□□□□ -0.19
GPHN-215ENST00000557654 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
GPHN-215ENST00000557654 NLRP6P59044 892 aa13.83□□□□□ -0.2
GPHN-215ENST00000557654 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
GPHN-215ENST00000557654 PPP1R37O75864 691 aa13.76□□□□□ -0.21
GPHN-215ENST00000557654 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
GPHN-215ENST00000557654 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
GPHN-215ENST00000557654 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
GPHN-215ENST00000557654 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
GPHN-215ENST00000557654 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
GPHN-215ENST00000557654 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
GPHN-215ENST00000557654 G3V3G9 751 aa13.66□□□□□ -0.22
GPHN-215ENST00000557654 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
GPHN-215ENST00000557654 CFAP44Q96MT7 982 aa13.64□□□□□ -0.23
GPHN-215ENST00000557654 TMEM121BQ9BXQ6 578 aaPredicted RBP13.63□□□□□ -0.23
GPHN-215ENST00000557654 SCUBE2Q9NQ36 999 aa13.63□□□□□ -0.23
GPHN-215ENST00000557654 MAMSTRQ6ZN01 415 aa13.62□□□□□ -0.23
GPHN-215ENST00000557654 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
GPHN-215ENST00000557654 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
GPHN-215ENST00000557654 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
GPHN-215ENST00000557654 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
GPHN-215ENST00000557654 TMEM92Q6UXU6 159 aa13.56□□□□□ -0.24
GPHN-215ENST00000557654 SLAIN1Q8ND83 568 aa13.56□□□□□ -0.24
GPHN-215ENST00000557654 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms