RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 CIZ1Q9ULV3 898 aaPredicted RBP14.78□□□□□ -0.04
GPHN-215ENST00000557654 CCDC61Q9Y6R9 512 aa14.78□□□□□ -0.04
GPHN-215ENST00000557654 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
GPHN-215ENST00000557654 SP7Q8TDD2 431 aaPredicted RBP14.74□□□□□ -0.05
GPHN-215ENST00000557654 GSE1Q14687 1217 aa14.72□□□□□ -0.05
GPHN-215ENST00000557654 PYGBP11216 843 aa14.69□□□□□ -0.06
GPHN-215ENST00000557654 GABBR2O75899 941 aa14.65□□□□□ -0.06
GPHN-215ENST00000557654 KIF12Q96FN5 646 aa14.65□□□□□ -0.06
GPHN-215ENST00000557654 MAP3K13O43283 966 aa14.63□□□□□ -0.07
GPHN-215ENST00000557654 PKD2Q13563 968 aa14.61□□□□□ -0.07
GPHN-215ENST00000557654 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
GPHN-215ENST00000557654 MS4A3Q96HJ5 214 aa14.59□□□□□ -0.07
GPHN-215ENST00000557654 PCDHB13Q9Y5F0 798 aa14.55□□□□□ -0.08
GPHN-215ENST00000557654 CHRM1P11229 460 aaPredicted RBP14.52□□□□□ -0.09
GPHN-215ENST00000557654 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
GPHN-215ENST00000557654 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
GPHN-215ENST00000557654 PCDHB8Q9UN66 801 aa14.51□□□□□ -0.09
GPHN-215ENST00000557654 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
GPHN-215ENST00000557654 CLCN6P51797 869 aa14.48□□□□□ -0.09
GPHN-215ENST00000557654 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
GPHN-215ENST00000557654 RTN4Q9NQC3 1192 aaKnown RBP14.48□□□□□ -0.09
GPHN-215ENST00000557654 RNF25Q96BH1 459 aaPredicted RBP14.46□□□□□ -0.09
GPHN-215ENST00000557654 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
GPHN-215ENST00000557654 RGL2O15211 777 aa14.42□□□□□ -0.1
GPHN-215ENST00000557654 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
GPHN-215ENST00000557654 ZNF467Q7Z7K2 595 aaPredicted RBP14.39□□□□□ -0.11
GPHN-215ENST00000557654 POTEIP0CG38 1075 aa14.38□□□□□ -0.11
GPHN-215ENST00000557654 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
GPHN-215ENST00000557654 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
GPHN-215ENST00000557654 BMP2KQ9NSY1 1161 aaPredicted RBP14.35□□□□□ -0.11
GPHN-215ENST00000557654 TIE1P35590 1138 aa14.31□□□□□ -0.12
GPHN-215ENST00000557654 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
GPHN-215ENST00000557654 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
GPHN-215ENST00000557654 PSEN1P49768 467 aa14.3□□□□□ -0.12
GPHN-215ENST00000557654 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
GPHN-215ENST00000557654 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
GPHN-215ENST00000557654 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
GPHN-215ENST00000557654 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
GPHN-215ENST00000557654 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
GPHN-215ENST00000557654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
GPHN-215ENST00000557654 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
GPHN-215ENST00000557654 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
GPHN-215ENST00000557654 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
GPHN-215ENST00000557654 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
GPHN-215ENST00000557654 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
GPHN-215ENST00000557654 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
GPHN-215ENST00000557654 STK25O00506 426 aa14.14□□□□□ -0.15
GPHN-215ENST00000557654 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
GPHN-215ENST00000557654 STK24Q9Y6E0 443 aa14.12□□□□□ -0.15
GPHN-215ENST00000557654 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
GPHN-215ENST00000557654 GOLGA2Q08379 1002 aa14.08□□□□□ -0.16
GPHN-215ENST00000557654 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
GPHN-215ENST00000557654 EFCAB3Q8N7B9 438 aa14.07□□□□□ -0.16
GPHN-215ENST00000557654 SLC39A7Q92504 469 aa14.07□□□□□ -0.16
GPHN-215ENST00000557654 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
GPHN-215ENST00000557654 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
GPHN-215ENST00000557654 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
GPHN-215ENST00000557654 C7P10643 843 aa14.03□□□□□ -0.16
GPHN-215ENST00000557654 COLQQ9Y215 455 aaPredicted RBP14.03□□□□□ -0.16
GPHN-215ENST00000557654 IER5LQ5T953 404 aa14.01□□□□□ -0.17
GPHN-215ENST00000557654 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
GPHN-215ENST00000557654 SEC24BO95487 1268 aa13.98□□□□□ -0.17
GPHN-215ENST00000557654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■■□ 20.1
GPHN-215ENST00000557654 POTEB2H3BUK9 544 aa13.95□□□□□ -0.18
GPHN-215ENST00000557654 PHF8Q9UPP1 1060 aa13.95□□□□□ -0.18
GPHN-215ENST00000557654 PLCG2P16885 1265 aa13.94□□□□□ -0.18
GPHN-215ENST00000557654 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
GPHN-215ENST00000557654 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
GPHN-215ENST00000557654 OCEL1Q9H607 264 aa13.92□□□□□ -0.18
GPHN-215ENST00000557654 MFRPQ9BY79 579 aa13.91□□□□□ -0.18
GPHN-215ENST00000557654 SOX12O15370 315 aa13.9□□□□□ -0.18
GPHN-215ENST00000557654 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
GPHN-215ENST00000557654 ILDR1Q86SU0 546 aaPredicted RBP13.89□□□□□ -0.19
GPHN-215ENST00000557654 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
GPHN-215ENST00000557654 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
GPHN-215ENST00000557654 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
GPHN-215ENST00000557654 LHX8Q68G74 356 aa13.85□□□□□ -0.19
GPHN-215ENST00000557654 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
GPHN-215ENST00000557654 NLRP6P59044 892 aa13.83□□□□□ -0.2
GPHN-215ENST00000557654 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
GPHN-215ENST00000557654 PPP1R37O75864 691 aa13.76□□□□□ -0.21
GPHN-215ENST00000557654 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
GPHN-215ENST00000557654 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
GPHN-215ENST00000557654 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
GPHN-215ENST00000557654 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
GPHN-215ENST00000557654 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
GPHN-215ENST00000557654 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
GPHN-215ENST00000557654 G3V3G9 751 aa13.66□□□□□ -0.22
GPHN-215ENST00000557654 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
GPHN-215ENST00000557654 CFAP44Q96MT7 982 aa13.64□□□□□ -0.23
GPHN-215ENST00000557654 TMEM121BQ9BXQ6 578 aaPredicted RBP13.63□□□□□ -0.23
GPHN-215ENST00000557654 SCUBE2Q9NQ36 999 aa13.63□□□□□ -0.23
GPHN-215ENST00000557654 MAMSTRQ6ZN01 415 aa13.62□□□□□ -0.23
GPHN-215ENST00000557654 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
GPHN-215ENST00000557654 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
GPHN-215ENST00000557654 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
GPHN-215ENST00000557654 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
GPHN-215ENST00000557654 TMEM92Q6UXU6 159 aa13.56□□□□□ -0.24
GPHN-215ENST00000557654 SLAIN1Q8ND83 568 aa13.56□□□□□ -0.24
GPHN-215ENST00000557654 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms