RNA–Protein interactions for RNA: ENST00000557355.1

LINC01146-208, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 4 BASIC

Gene LINC01146, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-208ENST00000557355 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.04
LINC01146-208ENST00000557355 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
LINC01146-208ENST00000557355 ATMINO43313 823 aaPredicted RBP15.24■□□□□ 0.03
LINC01146-208ENST00000557355 SLC39A7Q92504 469 aa15.2■□□□□ 0.02
LINC01146-208ENST00000557355 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
LINC01146-208ENST00000557355 C7P10643 843 aa15.19■□□□□ 0.02
LINC01146-208ENST00000557355 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
LINC01146-208ENST00000557355 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
LINC01146-208ENST00000557355 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
LINC01146-208ENST00000557355 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
LINC01146-208ENST00000557355 MAP3K13O43283 966 aa15.09■□□□□ 0.01
LINC01146-208ENST00000557355 BMP2KQ9NSY1 1161 aaPredicted RBP15.06■□□□□ 0
LINC01146-208ENST00000557355 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
LINC01146-208ENST00000557355 MAMSTRQ6ZN01 415 aa15.04■□□□□ -0
LINC01146-208ENST00000557355 POTEJP0CG39 1038 aa15.03■□□□□ -0
LINC01146-208ENST00000557355 TRPC6Q9Y210 931 aa15.03■□□□□ -0
LINC01146-208ENST00000557355 TIE1P35590 1138 aa15.02■□□□□ -0
LINC01146-208ENST00000557355 FKBP8Q14318 412 aa15.01□□□□□ -0.01
LINC01146-208ENST00000557355 NUBP1P53384 320 aa14.97□□□□□ -0.01
LINC01146-208ENST00000557355 SGIP1Q9BQI5 828 aa14.96□□□□□ -0.01
LINC01146-208ENST00000557355 PLSCR2Q9NRY7 297 aa14.96□□□□□ -0.01
LINC01146-208ENST00000557355 SCUBE2Q9NQ36 999 aa14.94□□□□□ -0.02
LINC01146-208ENST00000557355 POTEMA6NI47 508 aa14.93□□□□□ -0.02
LINC01146-208ENST00000557355 TTLL13PA6NNM8 815 aa14.93□□□□□ -0.02
LINC01146-208ENST00000557355 PCDHB13Q9Y5F0 798 aa14.93□□□□□ -0.02
LINC01146-208ENST00000557355 POTEFA5A3E0 1075 aa14.91□□□□□ -0.02
LINC01146-208ENST00000557355 FAM212AQ96EL1 285 aa14.9□□□□□ -0.02
LINC01146-208ENST00000557355 POTEGQ6S5H5 508 aa14.89□□□□□ -0.03
LINC01146-208ENST00000557355 SEC24BO95487 1268 aa14.87□□□□□ -0.03
LINC01146-208ENST00000557355 TRIM35Q9UPQ4 493 aa14.84□□□□□ -0.03
LINC01146-208ENST00000557355 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
LINC01146-208ENST00000557355 COLQQ9Y215 455 aaPredicted RBP14.83□□□□□ -0.04
LINC01146-208ENST00000557355 IER5LQ5T953 404 aa14.82□□□□□ -0.04
LINC01146-208ENST00000557355 FBXO3Q9UK99 471 aa14.79□□□□□ -0.04
LINC01146-208ENST00000557355 FAM163AQ96GL9 167 aaPredicted RBP14.77□□□□□ -0.05
LINC01146-208ENST00000557355 TMEM106CQ9BVX2 250 aa14.76□□□□□ -0.05
LINC01146-208ENST00000557355 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
LINC01146-208ENST00000557355 PCDH10Q9P2E7 1040 aa14.73□□□□□ -0.05
LINC01146-208ENST00000557355 LCE2DQ5TA82 110 aaPredicted RBP14.72□□□□□ -0.05
LINC01146-208ENST00000557355 PYGBP11216 843 aa14.68□□□□□ -0.06
LINC01146-208ENST00000557355 PLCG2P16885 1265 aa14.65□□□□□ -0.06
LINC01146-208ENST00000557355 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
LINC01146-208ENST00000557355 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
LINC01146-208ENST00000557355 VASPP50552 380 aaPredicted RBP14.59□□□□□ -0.07
LINC01146-208ENST00000557355 PCDHB8Q9UN66 801 aa14.59□□□□□ -0.07
LINC01146-208ENST00000557355 SLAIN1Q8ND83 568 aa14.58□□□□□ -0.08
LINC01146-208ENST00000557355 GSE1Q14687 1217 aa14.56□□□□□ -0.08
LINC01146-208ENST00000557355 OCEL1Q9H607 264 aa14.55□□□□□ -0.08
LINC01146-208ENST00000557355 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
LINC01146-208ENST00000557355 CHRM1P11229 460 aaPredicted RBP14.45□□□□□ -0.1
LINC01146-208ENST00000557355 ST18O60284 1047 aa14.43□□□□□ -0.1
LINC01146-208ENST00000557355 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
LINC01146-208ENST00000557355 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.41□□□□□ -0.1
LINC01146-208ENST00000557355 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
LINC01146-208ENST00000557355 MKRN3Q13064 507 aaKnown RBP14.39□□□□□ -0.11
LINC01146-208ENST00000557355 PSEN1P49768 467 aa14.36□□□□□ -0.11
LINC01146-208ENST00000557355 SNPHO15079 494 aa14.35□□□□□ -0.11
LINC01146-208ENST00000557355 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
LINC01146-208ENST00000557355 SPOCK2Q92563 424 aa14.33□□□□□ -0.12
LINC01146-208ENST00000557355 L3MBTL3Q96JM7 780 aaPredicted RBP14.31□□□□□ -0.12
LINC01146-208ENST00000557355 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
LINC01146-208ENST00000557355 TMEM121BQ9BXQ6 578 aaPredicted RBP14.3□□□□□ -0.12
LINC01146-208ENST00000557355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC01146-208ENST00000557355 C3orf67Q6ZVT6 689 aa14.29□□□□□ -0.12
LINC01146-208ENST00000557355 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
LINC01146-208ENST00000557355 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
LINC01146-208ENST00000557355 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
LINC01146-208ENST00000557355 MARVELD3Q96A59 401 aa14.18□□□□□ -0.14
LINC01146-208ENST00000557355 CABP2Q9NPB3 220 aa14.18□□□□□ -0.14
LINC01146-208ENST00000557355 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
LINC01146-208ENST00000557355 G3V3G9 751 aa14.11□□□□□ -0.15
LINC01146-208ENST00000557355 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
LINC01146-208ENST00000557355 BOLA1Q9Y3E2 137 aa14.09□□□□□ -0.15
LINC01146-208ENST00000557355 EMP3P54852 163 aa14.08□□□□□ -0.16
LINC01146-208ENST00000557355 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
LINC01146-208ENST00000557355 MMRN1Q13201 1228 aa14.02□□□□□ -0.17
LINC01146-208ENST00000557355 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
LINC01146-208ENST00000557355 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
LINC01146-208ENST00000557355 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
LINC01146-208ENST00000557355 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
LINC01146-208ENST00000557355 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
LINC01146-208ENST00000557355 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
LINC01146-208ENST00000557355 ZNF710Q8N1W2 664 aa13.91□□□□□ -0.18
LINC01146-208ENST00000557355 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
LINC01146-208ENST00000557355 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
LINC01146-208ENST00000557355 KRTAP3-3Q9BYR6 98 aa13.89□□□□□ -0.19
LINC01146-208ENST00000557355 KRTAP3-2Q9BYR7 98 aa13.89□□□□□ -0.19
LINC01146-208ENST00000557355 SOX12O15370 315 aa13.87□□□□□ -0.19
LINC01146-208ENST00000557355 HOXB1P14653 301 aaPredicted RBP13.87□□□□□ -0.19
LINC01146-208ENST00000557355 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
LINC01146-208ENST00000557355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.84□□□□□ -0.19
LINC01146-208ENST00000557355 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
LINC01146-208ENST00000557355 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
LINC01146-208ENST00000557355 ZFP91Q96JP5 570 aaPredicted RBP13.84□□□□□ -0.19
LINC01146-208ENST00000557355 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
LINC01146-208ENST00000557355 ERBB3P21860 1342 aa13.8□□□□□ -0.2
LINC01146-208ENST00000557355 MS4A4AQ96JQ5 239 aa13.78□□□□□ -0.2
LINC01146-208ENST00000557355 TMEM92Q6UXU6 159 aa13.77□□□□□ -0.21
LINC01146-208ENST00000557355 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
LINC01146-208ENST00000557355 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms