RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 OTUD5Q96G74 571 aa7.6□□□□□ -1.19
PTPN21-209ENST00000557249 PLSCR2Q9NRY7 297 aa7.6□□□□□ -1.19
PTPN21-209ENST00000557249 METRNQ9UJH8 293 aa7.6□□□□□ -1.19
PTPN21-209ENST00000557249 PELP1Q8IZL8 1130 aaKnown RBP7.59□□□□□ -1.19
PTPN21-209ENST00000557249 POTEB2H3BUK9 544 aa7.58□□□□□ -1.2
PTPN21-209ENST00000557249 ATMINO43313 823 aaPredicted RBP7.58□□□□□ -1.2
PTPN21-209ENST00000557249 MAMSTRQ6ZN01 415 aa7.57□□□□□ -1.2
PTPN21-209ENST00000557249 PLCD3Q8N3E9 789 aa7.57□□□□□ -1.2
PTPN21-209ENST00000557249 CCDC61Q9Y6R9 512 aa7.57□□□□□ -1.2
PTPN21-209ENST00000557249 KIF12Q96FN5 646 aa7.54□□□□□ -1.2
PTPN21-209ENST00000557249 ZBTB47Q9UFB7 747 aaPredicted RBP7.53□□□□□ -1.2
PTPN21-209ENST00000557249 ATN1P54259 1190 aaPredicted RBP7.52□□□□□ -1.21
PTPN21-209ENST00000557249 MAP3K13O43283 966 aa7.51□□□□□ -1.21
PTPN21-209ENST00000557249 SCUBE2Q9NQ36 999 aa7.51□□□□□ -1.21
PTPN21-209ENST00000557249 POTEMA6NI47 508 aa7.5□□□□□ -1.21
PTPN21-209ENST00000557249 RASEFQ8IZ41 740 aa7.5□□□□□ -1.21
PTPN21-209ENST00000557249 TIE1P35590 1138 aa7.49□□□□□ -1.21
PTPN21-209ENST00000557249 POTEGQ6S5H5 508 aa7.49□□□□□ -1.21
PTPN21-209ENST00000557249 SEC24BO95487 1268 aa7.48□□□□□ -1.21
PTPN21-209ENST00000557249 BMP2KQ9NSY1 1161 aaPredicted RBP7.48□□□□□ -1.21
PTPN21-209ENST00000557249 PCDHB13Q9Y5F0 798 aa7.45□□□□□ -1.22
PTPN21-209ENST00000557249 POTEJP0CG39 1038 aa7.44□□□□□ -1.22
PTPN21-209ENST00000557249 FAM212AQ96EL1 285 aa7.44□□□□□ -1.22
PTPN21-209ENST00000557249 SGIP1Q9BQI5 828 aa7.44□□□□□ -1.22
PTPN21-209ENST00000557249 TRPC6Q9Y210 931 aa7.44□□□□□ -1.22
PTPN21-209ENST00000557249 FAM163AQ96GL9 167 aaPredicted RBP7.43□□□□□ -1.22
PTPN21-209ENST00000557249 TTLL13PA6NNM8 815 aa7.42□□□□□ -1.22
PTPN21-209ENST00000557249 FKBP8Q14318 412 aa7.42□□□□□ -1.22
PTPN21-209ENST00000557249 PCDH10Q9P2E7 1040 aa7.42□□□□□ -1.22
PTPN21-209ENST00000557249 TRIM35Q9UPQ4 493 aa7.4□□□□□ -1.22
PTPN21-209ENST00000557249 NUBP1P53384 320 aa7.39□□□□□ -1.23
PTPN21-209ENST00000557249 IER5LQ5T953 404 aa7.39□□□□□ -1.23
PTPN21-209ENST00000557249 POTEFA5A3E0 1075 aa7.38□□□□□ -1.23
PTPN21-209ENST00000557249 COLQQ9Y215 455 aaPredicted RBP7.37□□□□□ -1.23
PTPN21-209ENST00000557249 DCAF8Q5TAQ9 597 aa7.36□□□□□ -1.23
PTPN21-209ENST00000557249 IFNL1Q8IU54 200 aa7.36□□□□□ -1.23
PTPN21-209ENST00000557249 TMEM106CQ9BVX2 250 aa7.36□□□□□ -1.23
PTPN21-209ENST00000557249 PLCG2P16885 1265 aa7.35□□□□□ -1.23
PTPN21-209ENST00000557249 FBXO3Q9UK99 471 aa7.35□□□□□ -1.23
PTPN21-209ENST00000557249 SLAIN1Q8ND83 568 aa7.31□□□□□ -1.24
PTPN21-209ENST00000557249 PYGBP11216 843 aa7.3□□□□□ -1.24
PTPN21-209ENST00000557249 KLHL34Q8N239 644 aa7.3□□□□□ -1.24
PTPN21-209ENST00000557249 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
PTPN21-209ENST00000557249 OCEL1Q9H607 264 aa7.26□□□□□ -1.25
PTPN21-209ENST00000557249 GOLGA2Q08379 1002 aa7.25□□□□□ -1.25
PTPN21-209ENST00000557249 GSE1Q14687 1217 aa7.25□□□□□ -1.25
PTPN21-209ENST00000557249 PCDHB8Q9UN66 801 aa7.25□□□□□ -1.25
PTPN21-209ENST00000557249 IRX5P78411 483 aaPredicted RBP7.24□□□□□ -1.25
PTPN21-209ENST00000557249 CDAN1Q8IWY9 1227 aa7.23□□□□□ -1.25
PTPN21-209ENST00000557249 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.23□□□□□ -1.25
PTPN21-209ENST00000557249 SNPHO15079 494 aa7.22□□□□□ -1.25
PTPN21-209ENST00000557249 ZNF467Q7Z7K2 595 aaPredicted RBP7.22□□□□□ -1.25
PTPN21-209ENST00000557249 ST18O60284 1047 aa7.21□□□□□ -1.26
PTPN21-209ENST00000557249 VASPP50552 380 aaPredicted RBP7.21□□□□□ -1.26
PTPN21-209ENST00000557249 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.26
PTPN21-209ENST00000557249 C3orf67Q6ZVT6 689 aa7.18□□□□□ -1.26
PTPN21-209ENST00000557249 L3MBTL3Q96JM7 780 aaPredicted RBP7.17□□□□□ -1.26
PTPN21-209ENST00000557249 TMEM121BQ9BXQ6 578 aaPredicted RBP7.16□□□□□ -1.26
PTPN21-209ENST00000557249 CHRM1P11229 460 aaPredicted RBP7.14□□□□□ -1.27
PTPN21-209ENST00000557249 PSEN1P49768 467 aa7.14□□□□□ -1.27
PTPN21-209ENST00000557249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.14□□□□□ -1.27
PTPN21-209ENST00000557249 G3V3G9 751 aa7.13□□□□□ -1.27
PTPN21-209ENST00000557249 CIZ1Q9ULV3 898 aaPredicted RBP7.12□□□□□ -1.27
PTPN21-209ENST00000557249 PDAP1Q13442 181 aaKnown RBP7.11□□□□□ -1.27
PTPN21-209ENST00000557249 PDCD7Q8N8D1 485 aaKnown RBP7.1□□□□□ -1.27
PTPN21-209ENST00000557249 SPOCK2Q92563 424 aa7.1□□□□□ -1.27
PTPN21-209ENST00000557249 MARVELD3Q96A59 401 aa7.1□□□□□ -1.27
PTPN21-209ENST00000557249 EMP3P54852 163 aa7.07□□□□□ -1.28
PTPN21-209ENST00000557249 CABP2Q9NPB3 220 aa7.06□□□□□ -1.28
PTPN21-209ENST00000557249 SPNS2Q8IVW8 549 aa7.04□□□□□ -1.28
PTPN21-209ENST00000557249 MMRN1Q13201 1228 aa7.03□□□□□ -1.28
PTPN21-209ENST00000557249 IFNLR1Q8IU57 520 aaPredicted RBP7.03□□□□□ -1.28
PTPN21-209ENST00000557249 BOLA1Q9Y3E2 137 aa7.02□□□□□ -1.29
PTPN21-209ENST00000557249 FAM205CA6NFA0 338 aa7.01□□□□□ -1.29
PTPN21-209ENST00000557249 DPY19L2Q6NUT2 758 aa7.01□□□□□ -1.29
PTPN21-209ENST00000557249 ZNF710Q8N1W2 664 aa7□□□□□ -1.29
PTPN21-209ENST00000557249 TRIM41Q8WV44 630 aa7□□□□□ -1.29
PTPN21-209ENST00000557249 HS3ST6Q96QI5 342 aa6.99□□□□□ -1.29
PTPN21-209ENST00000557249 ILDR1Q86SU0 546 aaPredicted RBP6.98□□□□□ -1.29
PTPN21-209ENST00000557249 RIMBP2O15034 1052 aa6.96□□□□□ -1.3
PTPN21-209ENST00000557249 DOK7Q18PE1 504 aa6.96□□□□□ -1.3
PTPN21-209ENST00000557249 EFCAB3Q8N7B9 438 aa6.94□□□□□ -1.3
PTPN21-209ENST00000557249 ERBB3P21860 1342 aa6.93□□□□□ -1.3
PTPN21-209ENST00000557249 HOXB3P14651 431 aaPredicted RBP6.91□□□□□ -1.3
PTPN21-209ENST00000557249 HOXB1P14653 301 aaPredicted RBP6.91□□□□□ -1.3
PTPN21-209ENST00000557249 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
PTPN21-209ENST00000557249 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
PTPN21-209ENST00000557249 POTEB3A0JP26 581 aa6.9□□□□□ -1.3
PTPN21-209ENST00000557249 POTEBQ6S5H4 581 aa6.9□□□□□ -1.3
PTPN21-209ENST00000557249 RIOK3O14730 519 aaKnown RBP6.89□□□□□ -1.31
PTPN21-209ENST00000557249 SOX12O15370 315 aa6.89□□□□□ -1.31
PTPN21-209ENST00000557249 VGFO15240 615 aaPredicted RBP6.87□□□□□ -1.31
PTPN21-209ENST00000557249 MICALL2Q8IY33 904 aa6.87□□□□□ -1.31
PTPN21-209ENST00000557249 TAOK2Q9UL54 1235 aa6.86□□□□□ -1.31
PTPN21-209ENST00000557249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.85□□□□□ -1.31
PTPN21-209ENST00000557249 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
PTPN21-209ENST00000557249 ZFP91Q96JP5 570 aaPredicted RBP6.85□□□□□ -1.31
PTPN21-209ENST00000557249 ZSWIM6Q9HCJ5 1215 aa6.85□□□□□ -1.31
PTPN21-209ENST00000557249 PHF8Q9UPP1 1060 aa6.83□□□□□ -1.32
PTPN21-209ENST00000557249 NLRP6P59044 892 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms