RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 PHF12Q96QT6 1004 aa19.76■□□□□ 0.75
CCDC175-205ENST00000556996 CIZ1Q9ULV3 898 aaPredicted RBP19.76■□□□□ 0.75
CCDC175-205ENST00000556996 ZNF579Q8NAF0 562 aaKnown RBP19.74■□□□□ 0.75
CCDC175-205ENST00000556996 GSE1Q14687 1217 aa19.73■□□□□ 0.75
CCDC175-205ENST00000556996 PYGBP11216 843 aa19.64■□□□□ 0.73
CCDC175-205ENST00000556996 SP7Q8TDD2 431 aaPredicted RBP19.64■□□□□ 0.73
CCDC175-205ENST00000556996 PKD2Q13563 968 aa19.63■□□□□ 0.73
CCDC175-205ENST00000556996 KIF12Q96FN5 646 aa19.6■□□□□ 0.73
CCDC175-205ENST00000556996 MAP3K13O43283 966 aa19.54■□□□□ 0.72
CCDC175-205ENST00000556996 GABBR2O75899 941 aa19.53■□□□□ 0.72
CCDC175-205ENST00000556996 RTN4Q9NQC3 1192 aaKnown RBP19.53■□□□□ 0.72
CCDC175-205ENST00000556996 MS4A3Q96HJ5 214 aa19.51■□□□□ 0.71
CCDC175-205ENST00000556996 GALR2O43603 387 aaPredicted RBP19.49■□□□□ 0.71
CCDC175-205ENST00000556996 CHRM1P11229 460 aaPredicted RBP19.48■□□□□ 0.71
CCDC175-205ENST00000556996 ECM2O94769 699 aaPredicted RBP19.46■□□□□ 0.71
CCDC175-205ENST00000556996 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
CCDC175-205ENST00000556996 PCDHB13Q9Y5F0 798 aa19.46■□□□□ 0.71
CCDC175-205ENST00000556996 AMER1Q5JTC6 1135 aaPredicted RBP19.45■□□□□ 0.7
CCDC175-205ENST00000556996 IFNL1Q8IU54 200 aa19.42■□□□□ 0.7
CCDC175-205ENST00000556996 RNF25Q96BH1 459 aaPredicted RBP19.42■□□□□ 0.7
CCDC175-205ENST00000556996 PCDHB8Q9UN66 801 aa19.4■□□□□ 0.7
CCDC175-205ENST00000556996 CLCN6P51797 869 aa19.38■□□□□ 0.69
CCDC175-205ENST00000556996 SGIP1Q9BQI5 828 aa19.38■□□□□ 0.69
CCDC175-205ENST00000556996 TRPC6Q9Y210 931 aa19.38■□□□□ 0.69
CCDC175-205ENST00000556996 RGL2O15211 777 aa19.36■□□□□ 0.69
CCDC175-205ENST00000556996 ZNF467Q7Z7K2 595 aaPredicted RBP19.29■□□□□ 0.68
CCDC175-205ENST00000556996 RIOK3O14730 519 aaKnown RBP19.25■□□□□ 0.67
CCDC175-205ENST00000556996 POTEIP0CG38 1075 aa19.19■□□□□ 0.66
CCDC175-205ENST00000556996 BMP2KQ9NSY1 1161 aaPredicted RBP19.19■□□□□ 0.66
CCDC175-205ENST00000556996 TIE1P35590 1138 aa19.15■□□□□ 0.66
CCDC175-205ENST00000556996 PSEN1P49768 467 aa19.14■□□□□ 0.65
CCDC175-205ENST00000556996 PDAP1Q13442 181 aaKnown RBP19.14■□□□□ 0.65
CCDC175-205ENST00000556996 DCBLD2Q96PD2 775 aa19.14■□□□□ 0.65
CCDC175-205ENST00000556996 TTLL13PA6NNM8 815 aa19.12■□□□□ 0.65
CCDC175-205ENST00000556996 TMEM106CQ9BVX2 250 aa19.12■□□□□ 0.65
CCDC175-205ENST00000556996 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
CCDC175-205ENST00000556996 ATMINO43313 823 aaPredicted RBP19.11■□□□□ 0.65
CCDC175-205ENST00000556996 ASTLQ6HA08 431 aaPredicted RBP19.1■□□□□ 0.65
CCDC175-205ENST00000556996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.09■□□□□ 0.65
CCDC175-205ENST00000556996 ZFP91Q96JP5 570 aaPredicted RBP19.09■□□□□ 0.65
CCDC175-205ENST00000556996 ATN1P54259 1190 aaPredicted RBP19.08■□□□□ 0.64
CCDC175-205ENST00000556996 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
CCDC175-205ENST00000556996 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
CCDC175-205ENST00000556996 TRIM35Q9UPQ4 493 aa18.99■□□□□ 0.63
CCDC175-205ENST00000556996 BCL11BQ9C0K0 894 aaPredicted RBP18.96■□□□□ 0.63
CCDC175-205ENST00000556996 TAOK2Q9UL54 1235 aa18.96■□□□□ 0.63
CCDC175-205ENST00000556996 STK25O00506 426 aa18.95■□□□□ 0.62
CCDC175-205ENST00000556996 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
CCDC175-205ENST00000556996 STK24Q9Y6E0 443 aa18.91■□□□□ 0.62
CCDC175-205ENST00000556996 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
CCDC175-205ENST00000556996 HS6ST3Q8IZP7 471 aa18.88■□□□□ 0.61
CCDC175-205ENST00000556996 EFCAB3Q8N7B9 438 aa18.82■□□□□ 0.6
CCDC175-205ENST00000556996 GOLGA2Q08379 1002 aa18.81■□□□□ 0.6
CCDC175-205ENST00000556996 SLC39A7Q92504 469 aa18.8■□□□□ 0.6
CCDC175-205ENST00000556996 METRNQ9UJH8 293 aa18.8■□□□□ 0.6
CCDC175-205ENST00000556996 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
CCDC175-205ENST00000556996 MKRN3Q13064 507 aaKnown RBP18.76■□□□□ 0.59
CCDC175-205ENST00000556996 IER5LQ5T953 404 aa18.76■□□□□ 0.59
CCDC175-205ENST00000556996 C7P10643 843 aa18.75■□□□□ 0.59
CCDC175-205ENST00000556996 COLQQ9Y215 455 aaPredicted RBP18.74■□□□□ 0.59
CCDC175-205ENST00000556996 IRX5P78411 483 aaPredicted RBP18.73■□□□□ 0.59
CCDC175-205ENST00000556996 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
CCDC175-205ENST00000556996 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
CCDC175-205ENST00000556996 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
CCDC175-205ENST00000556996 MFRPQ9BY79 579 aa18.66■□□□□ 0.58
CCDC175-205ENST00000556996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC175-205ENST00000556996 ILDR1Q86SU0 546 aaPredicted RBP18.65■□□□□ 0.58
CCDC175-205ENST00000556996 PDCD7Q8N8D1 485 aaKnown RBP18.65■□□□□ 0.58
CCDC175-205ENST00000556996 SEC24BO95487 1268 aa18.64■□□□□ 0.57
CCDC175-205ENST00000556996 SOX12O15370 315 aa18.63■□□□□ 0.57
CCDC175-205ENST00000556996 OCEL1Q9H607 264 aa18.62■□□□□ 0.57
CCDC175-205ENST00000556996 PLCG2P16885 1265 aa18.61■□□□□ 0.57
CCDC175-205ENST00000556996 MS4A4AQ96JQ5 239 aa18.61■□□□□ 0.57
CCDC175-205ENST00000556996 FBXO22Q8NEZ5 403 aa18.6■□□□□ 0.57
CCDC175-205ENST00000556996 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
CCDC175-205ENST00000556996 DPY19L2Q6NUT2 758 aa18.57■□□□□ 0.56
CCDC175-205ENST00000556996 NLRP6P59044 892 aa18.54■□□□□ 0.56
CCDC175-205ENST00000556996 BBXQ8WY36 941 aaPredicted RBP18.54■□□□□ 0.56
CCDC175-205ENST00000556996 POTEJP0CG39 1038 aa18.51■□□□□ 0.55
CCDC175-205ENST00000556996 GTPBP6O43824 516 aaPredicted RBP18.46■□□□□ 0.55
CCDC175-205ENST00000556996 PPP1R37O75864 691 aa18.43■□□□□ 0.54
CCDC175-205ENST00000556996 LHX8Q68G74 356 aa18.42■□□□□ 0.54
CCDC175-205ENST00000556996 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
CCDC175-205ENST00000556996 BOLA1Q9Y3E2 137 aa18.34■□□□□ 0.53
CCDC175-205ENST00000556996 PAXIP1Q6ZW49 1069 aaPredicted RBP18.32■□□□□ 0.52
CCDC175-205ENST00000556996 MICALL2Q8IY33 904 aa18.32■□□□□ 0.52
CCDC175-205ENST00000556996 L3MBTL3Q96JM7 780 aaPredicted RBP18.32■□□□□ 0.52
CCDC175-205ENST00000556996 RYDENQ9NUL5 291 aaKnown RBP18.31■□□□□ 0.52
CCDC175-205ENST00000556996 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
CCDC175-205ENST00000556996 TMEM121BQ9BXQ6 578 aaPredicted RBP18.29■□□□□ 0.52
CCDC175-205ENST00000556996 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
CCDC175-205ENST00000556996 OTUD5Q96G74 571 aa18.27■□□□□ 0.52
CCDC175-205ENST00000556996 G3V3G9 751 aa18.23■□□□□ 0.51
CCDC175-205ENST00000556996 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
CCDC175-205ENST00000556996 SCUBE2Q9NQ36 999 aa18.19■□□□□ 0.5
CCDC175-205ENST00000556996 MAMSTRQ6ZN01 415 aa18.18■□□□□ 0.5
CCDC175-205ENST00000556996 TMEM92Q6UXU6 159 aa18.14■□□□□ 0.49
CCDC175-205ENST00000556996 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.14■□□□□ 0.49
CCDC175-205ENST00000556996 PLCB2Q00722 1185 aa18.13■□□□□ 0.49
CCDC175-205ENST00000556996 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms