RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
LINC00871-203ENST00000556869 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
LINC00871-203ENST00000556869 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
LINC00871-203ENST00000556869 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
LINC00871-203ENST00000556869 RASEFQ8IZ41 740 aa12.27□□□□□ -0.45
LINC00871-203ENST00000556869 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
LINC00871-203ENST00000556869 PLSCR2Q9NRY7 297 aa12.26□□□□□ -0.45
LINC00871-203ENST00000556869 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
LINC00871-203ENST00000556869 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
LINC00871-203ENST00000556869 MAP3K13O43283 966 aa12.21□□□□□ -0.45
LINC00871-203ENST00000556869 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
LINC00871-203ENST00000556869 FKBP8Q14318 412 aa12.21□□□□□ -0.45
LINC00871-203ENST00000556869 C7P10643 843 aa12.2□□□□□ -0.46
LINC00871-203ENST00000556869 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
LINC00871-203ENST00000556869 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
LINC00871-203ENST00000556869 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
LINC00871-203ENST00000556869 POTEMA6NI47 508 aa12.12□□□□□ -0.47
LINC00871-203ENST00000556869 TIE1P35590 1138 aa12.11□□□□□ -0.47
LINC00871-203ENST00000556869 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
LINC00871-203ENST00000556869 NUBP1P53384 320 aa12.1□□□□□ -0.47
LINC00871-203ENST00000556869 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
LINC00871-203ENST00000556869 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
LINC00871-203ENST00000556869 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
LINC00871-203ENST00000556869 POTEFA5A3E0 1075 aa12.06□□□□□ -0.48
LINC00871-203ENST00000556869 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
LINC00871-203ENST00000556869 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
LINC00871-203ENST00000556869 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
LINC00871-203ENST00000556869 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
LINC00871-203ENST00000556869 SEC24BO95487 1268 aa12□□□□□ -0.49
LINC00871-203ENST00000556869 IFNL1Q8IU54 200 aa12□□□□□ -0.49
LINC00871-203ENST00000556869 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
LINC00871-203ENST00000556869 COLQQ9Y215 455 aaPredicted RBP12□□□□□ -0.49
LINC00871-203ENST00000556869 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
LINC00871-203ENST00000556869 TMEM106CQ9BVX2 250 aa11.94□□□□□ -0.5
LINC00871-203ENST00000556869 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
LINC00871-203ENST00000556869 IER5LQ5T953 404 aa11.92□□□□□ -0.5
LINC00871-203ENST00000556869 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
LINC00871-203ENST00000556869 PYGBP11216 843 aa11.91□□□□□ -0.5
LINC00871-203ENST00000556869 FAM163AQ96GL9 167 aaPredicted RBP11.91□□□□□ -0.5
LINC00871-203ENST00000556869 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
LINC00871-203ENST00000556869 PLCG2P16885 1265 aa11.83□□□□□ -0.52
LINC00871-203ENST00000556869 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
LINC00871-203ENST00000556869 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
LINC00871-203ENST00000556869 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
LINC00871-203ENST00000556869 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
LINC00871-203ENST00000556869 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
LINC00871-203ENST00000556869 GSE1Q14687 1217 aa11.74□□□□□ -0.53
LINC00871-203ENST00000556869 OCEL1Q9H607 264 aa11.72□□□□□ -0.53
LINC00871-203ENST00000556869 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
LINC00871-203ENST00000556869 ST18O60284 1047 aa11.65□□□□□ -0.54
LINC00871-203ENST00000556869 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
LINC00871-203ENST00000556869 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
LINC00871-203ENST00000556869 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
LINC00871-203ENST00000556869 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
LINC00871-203ENST00000556869 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
LINC00871-203ENST00000556869 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
LINC00871-203ENST00000556869 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.61□□□□□ -0.55
LINC00871-203ENST00000556869 PSEN1P49768 467 aa11.6□□□□□ -0.55
LINC00871-203ENST00000556869 SPOCK2Q92563 424 aa11.59□□□□□ -0.55
LINC00871-203ENST00000556869 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
LINC00871-203ENST00000556869 C3orf67Q6ZVT6 689 aa11.55□□□□□ -0.56
LINC00871-203ENST00000556869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00871-203ENST00000556869 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
LINC00871-203ENST00000556869 SNPHO15079 494 aa11.51□□□□□ -0.57
LINC00871-203ENST00000556869 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
LINC00871-203ENST00000556869 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
LINC00871-203ENST00000556869 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
LINC00871-203ENST00000556869 TMEM121BQ9BXQ6 578 aaPredicted RBP11.48□□□□□ -0.57
LINC00871-203ENST00000556869 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
LINC00871-203ENST00000556869 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
LINC00871-203ENST00000556869 G3V3G9 751 aa11.38□□□□□ -0.59
LINC00871-203ENST00000556869 EMP3P54852 163 aa11.37□□□□□ -0.59
LINC00871-203ENST00000556869 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
LINC00871-203ENST00000556869 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
LINC00871-203ENST00000556869 MMRN1Q13201 1228 aa11.35□□□□□ -0.59
LINC00871-203ENST00000556869 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
LINC00871-203ENST00000556869 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
LINC00871-203ENST00000556869 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
LINC00871-203ENST00000556869 HS3ST6Q96QI5 342 aa11.29□□□□□ -0.6
LINC00871-203ENST00000556869 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
LINC00871-203ENST00000556869 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
LINC00871-203ENST00000556869 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
LINC00871-203ENST00000556869 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
LINC00871-203ENST00000556869 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
LINC00871-203ENST00000556869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
LINC00871-203ENST00000556869 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
LINC00871-203ENST00000556869 ZNF710Q8N1W2 664 aa11.22□□□□□ -0.61
LINC00871-203ENST00000556869 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
LINC00871-203ENST00000556869 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
LINC00871-203ENST00000556869 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
LINC00871-203ENST00000556869 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
LINC00871-203ENST00000556869 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
LINC00871-203ENST00000556869 SOX12O15370 315 aa11.17□□□□□ -0.62
LINC00871-203ENST00000556869 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
LINC00871-203ENST00000556869 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
LINC00871-203ENST00000556869 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
LINC00871-203ENST00000556869 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
LINC00871-203ENST00000556869 ERBB3P21860 1342 aa11.14□□□□□ -0.63
LINC00871-203ENST00000556869 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
LINC00871-203ENST00000556869 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms