RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
FCF1-208ENST00000556814 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
FCF1-208ENST00000556814 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
FCF1-208ENST00000556814 C7P10643 843 aa12.77□□□□□ -0.37
FCF1-208ENST00000556814 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
FCF1-208ENST00000556814 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
FCF1-208ENST00000556814 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
FCF1-208ENST00000556814 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
FCF1-208ENST00000556814 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
FCF1-208ENST00000556814 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
FCF1-208ENST00000556814 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
FCF1-208ENST00000556814 SCUBE2Q9NQ36 999 aa12.63□□□□□ -0.39
FCF1-208ENST00000556814 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
FCF1-208ENST00000556814 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
FCF1-208ENST00000556814 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
FCF1-208ENST00000556814 BMP2KQ9NSY1 1161 aaPredicted RBP12.57□□□□□ -0.4
FCF1-208ENST00000556814 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
FCF1-208ENST00000556814 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
FCF1-208ENST00000556814 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
FCF1-208ENST00000556814 ST18O60284 1047 aa12.46□□□□□ -0.41
FCF1-208ENST00000556814 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
FCF1-208ENST00000556814 MAP3K13O43283 966 aa12.43□□□□□ -0.42
FCF1-208ENST00000556814 SPNS2Q8IVW8 549 aa12.4□□□□□ -0.42
FCF1-208ENST00000556814 TTLL13PA6NNM8 815 aa12.37□□□□□ -0.43
FCF1-208ENST00000556814 TIE1P35590 1138 aa12.35□□□□□ -0.43
FCF1-208ENST00000556814 SEC24BO95487 1268 aa12.34□□□□□ -0.43
FCF1-208ENST00000556814 SLAIN1Q8ND83 568 aa12.33□□□□□ -0.44
FCF1-208ENST00000556814 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
FCF1-208ENST00000556814 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
FCF1-208ENST00000556814 FKBP8Q14318 412 aa12.26□□□□□ -0.45
FCF1-208ENST00000556814 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
FCF1-208ENST00000556814 IER5LQ5T953 404 aa12.17□□□□□ -0.46
FCF1-208ENST00000556814 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
FCF1-208ENST00000556814 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
FCF1-208ENST00000556814 PROM2Q8N271 834 aa12.12□□□□□ -0.47
FCF1-208ENST00000556814 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
FCF1-208ENST00000556814 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
FCF1-208ENST00000556814 IRX5P78411 483 aaPredicted RBP12.09□□□□□ -0.47
FCF1-208ENST00000556814 KRTAP3-3Q9BYR6 98 aa12.07□□□□□ -0.48
FCF1-208ENST00000556814 KRTAP3-2Q9BYR7 98 aa12.07□□□□□ -0.48
FCF1-208ENST00000556814 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
FCF1-208ENST00000556814 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
FCF1-208ENST00000556814 PLCG2P16885 1265 aa12.04□□□□□ -0.48
FCF1-208ENST00000556814 MIER1Q8N108 512 aa12.01□□□□□ -0.49
FCF1-208ENST00000556814 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
FCF1-208ENST00000556814 NUBP1P53384 320 aa11.95□□□□□ -0.5
FCF1-208ENST00000556814 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
FCF1-208ENST00000556814 EMP3P54852 163 aa11.92□□□□□ -0.5
FCF1-208ENST00000556814 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
FCF1-208ENST00000556814 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
FCF1-208ENST00000556814 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
FCF1-208ENST00000556814 SNPHO15079 494 aa11.9□□□□□ -0.5
FCF1-208ENST00000556814 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
FCF1-208ENST00000556814 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
FCF1-208ENST00000556814 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
FCF1-208ENST00000556814 PCDHB8Q9UN66 801 aa11.8□□□□□ -0.52
FCF1-208ENST00000556814 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
FCF1-208ENST00000556814 PYGBP11216 843 aa11.75□□□□□ -0.53
FCF1-208ENST00000556814 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
FCF1-208ENST00000556814 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
FCF1-208ENST00000556814 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
FCF1-208ENST00000556814 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
FCF1-208ENST00000556814 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
FCF1-208ENST00000556814 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
FCF1-208ENST00000556814 DCAF8Q5TAQ9 597 aa11.6□□□□□ -0.55
FCF1-208ENST00000556814 L3MBTL3Q96JM7 780 aaPredicted RBP11.59□□□□□ -0.55
FCF1-208ENST00000556814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
FCF1-208ENST00000556814 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
FCF1-208ENST00000556814 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
FCF1-208ENST00000556814 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
FCF1-208ENST00000556814 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
FCF1-208ENST00000556814 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
FCF1-208ENST00000556814 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
FCF1-208ENST00000556814 ERBB3P21860 1342 aa11.52□□□□□ -0.57
FCF1-208ENST00000556814 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
FCF1-208ENST00000556814 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
FCF1-208ENST00000556814 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
FCF1-208ENST00000556814 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
FCF1-208ENST00000556814 PSEN1P49768 467 aa11.42□□□□□ -0.58
FCF1-208ENST00000556814 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
FCF1-208ENST00000556814 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
FCF1-208ENST00000556814 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
FCF1-208ENST00000556814 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
FCF1-208ENST00000556814 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
FCF1-208ENST00000556814 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
FCF1-208ENST00000556814 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
FCF1-208ENST00000556814 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
FCF1-208ENST00000556814 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
FCF1-208ENST00000556814 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
FCF1-208ENST00000556814 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
FCF1-208ENST00000556814 CHRM1P11229 460 aaPredicted RBP11.27□□□□□ -0.61
FCF1-208ENST00000556814 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
FCF1-208ENST00000556814 G3V3G9 751 aa11.21□□□□□ -0.61
FCF1-208ENST00000556814 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
FCF1-208ENST00000556814 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
FCF1-208ENST00000556814 ARSIQ5FYB1 569 aa11.2□□□□□ -0.62
FCF1-208ENST00000556814 GSE1Q14687 1217 aa11.19□□□□□ -0.62
FCF1-208ENST00000556814 POTEEQ6S8J3 1075 aa11.19□□□□□ -0.62
FCF1-208ENST00000556814 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
FCF1-208ENST00000556814 PTGER2P43116 358 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms