RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
TMEM260-212ENST00000556810 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
TMEM260-212ENST00000556810 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
TMEM260-212ENST00000556810 NUBP1P53384 320 aa12.9□□□□□ -0.34
TMEM260-212ENST00000556810 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
TMEM260-212ENST00000556810 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
TMEM260-212ENST00000556810 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
TMEM260-212ENST00000556810 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
TMEM260-212ENST00000556810 MAP3K13O43283 966 aa12.77□□□□□ -0.37
TMEM260-212ENST00000556810 LHX8Q68G74 356 aa12.74□□□□□ -0.37
TMEM260-212ENST00000556810 DCAF8Q5TAQ9 597 aa12.73□□□□□ -0.37
TMEM260-212ENST00000556810 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
TMEM260-212ENST00000556810 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-212ENST00000556810 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-212ENST00000556810 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
TMEM260-212ENST00000556810 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
TMEM260-212ENST00000556810 PELP1Q8IZL8 1130 aaKnown RBP12.68□□□□□ -0.38
TMEM260-212ENST00000556810 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
TMEM260-212ENST00000556810 TIE1P35590 1138 aa12.64□□□□□ -0.39
TMEM260-212ENST00000556810 GSE1Q14687 1217 aa12.64□□□□□ -0.39
TMEM260-212ENST00000556810 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
TMEM260-212ENST00000556810 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
TMEM260-212ENST00000556810 PYGBP11216 843 aa12.63□□□□□ -0.39
TMEM260-212ENST00000556810 ATN1P54259 1190 aaPredicted RBP12.63□□□□□ -0.39
TMEM260-212ENST00000556810 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
TMEM260-212ENST00000556810 SLC39A7Q92504 469 aa12.61□□□□□ -0.39
TMEM260-212ENST00000556810 C7P10643 843 aa12.58□□□□□ -0.4
TMEM260-212ENST00000556810 METRNQ9UJH8 293 aa12.58□□□□□ -0.4
TMEM260-212ENST00000556810 TTLL13PA6NNM8 815 aa12.57□□□□□ -0.4
TMEM260-212ENST00000556810 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
TMEM260-212ENST00000556810 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
TMEM260-212ENST00000556810 CHRM1P11229 460 aaPredicted RBP12.5□□□□□ -0.41
TMEM260-212ENST00000556810 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
TMEM260-212ENST00000556810 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
TMEM260-212ENST00000556810 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
TMEM260-212ENST00000556810 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-212ENST00000556810 IER5LQ5T953 404 aa12.43□□□□□ -0.42
TMEM260-212ENST00000556810 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
TMEM260-212ENST00000556810 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
TMEM260-212ENST00000556810 SEC24BO95487 1268 aa12.4□□□□□ -0.42
TMEM260-212ENST00000556810 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
TMEM260-212ENST00000556810 COLQQ9Y215 455 aaPredicted RBP12.38□□□□□ -0.43
TMEM260-212ENST00000556810 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
TMEM260-212ENST00000556810 PSEN1P49768 467 aa12.35□□□□□ -0.43
TMEM260-212ENST00000556810 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
TMEM260-212ENST00000556810 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
TMEM260-212ENST00000556810 PLCG2P16885 1265 aa12.31□□□□□ -0.44
TMEM260-212ENST00000556810 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-212ENST00000556810 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
TMEM260-212ENST00000556810 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
TMEM260-212ENST00000556810 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
TMEM260-212ENST00000556810 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
TMEM260-212ENST00000556810 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
TMEM260-212ENST00000556810 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-212ENST00000556810 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
TMEM260-212ENST00000556810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
TMEM260-212ENST00000556810 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
TMEM260-212ENST00000556810 VGFO15240 615 aaPredicted RBP12.13□□□□□ -0.47
TMEM260-212ENST00000556810 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-212ENST00000556810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-212ENST00000556810 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-212ENST00000556810 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-212ENST00000556810 PKD2Q13563 968 aa12.09□□□□□ -0.47
TMEM260-212ENST00000556810 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
TMEM260-212ENST00000556810 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
TMEM260-212ENST00000556810 EFCAB3Q8N7B9 438 aa12.07□□□□□ -0.48
TMEM260-212ENST00000556810 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
TMEM260-212ENST00000556810 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
TMEM260-212ENST00000556810 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
TMEM260-212ENST00000556810 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
TMEM260-212ENST00000556810 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.49
TMEM260-212ENST00000556810 RGL2O15211 777 aa12□□□□□ -0.49
TMEM260-212ENST00000556810 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-212ENST00000556810 SOX12O15370 315 aa11.98□□□□□ -0.49
TMEM260-212ENST00000556810 LCE2DQ5TA82 110 aaPredicted RBP11.98□□□□□ -0.49
TMEM260-212ENST00000556810 POTEMA6NI47 508 aa11.97□□□□□ -0.49
TMEM260-212ENST00000556810 G3V3G9 751 aa11.97□□□□□ -0.49
TMEM260-212ENST00000556810 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
TMEM260-212ENST00000556810 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
TMEM260-212ENST00000556810 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
TMEM260-212ENST00000556810 STK25O00506 426 aa11.94□□□□□ -0.5
TMEM260-212ENST00000556810 PHF8Q9UPP1 1060 aa11.93□□□□□ -0.5
TMEM260-212ENST00000556810 ABCC9O60706 1549 aa11.91□□□□□ -0.5
TMEM260-212ENST00000556810 MS4A4AQ96JQ5 239 aa11.9□□□□□ -0.5
TMEM260-212ENST00000556810 SNPHO15079 494 aa11.89□□□□□ -0.51
TMEM260-212ENST00000556810 TMEM121BQ9BXQ6 578 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-212ENST00000556810 NLRP6P59044 892 aa11.88□□□□□ -0.51
TMEM260-212ENST00000556810 ST18O60284 1047 aa11.87□□□□□ -0.51
TMEM260-212ENST00000556810 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
TMEM260-212ENST00000556810 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
TMEM260-212ENST00000556810 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
TMEM260-212ENST00000556810 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
TMEM260-212ENST00000556810 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
TMEM260-212ENST00000556810 TMEM92Q6UXU6 159 aa11.74□□□□□ -0.53
TMEM260-212ENST00000556810 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.53
TMEM260-212ENST00000556810 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-212ENST00000556810 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
TMEM260-212ENST00000556810 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
TMEM260-212ENST00000556810 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
TMEM260-212ENST00000556810 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms