RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
ATXN3-240ENST00000556339 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
ATXN3-240ENST00000556339 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
ATXN3-240ENST00000556339 KIF12Q96FN5 646 aa10.51□□□□□ -0.73
ATXN3-240ENST00000556339 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
ATXN3-240ENST00000556339 MAP3K13O43283 966 aa10.47□□□□□ -0.73
ATXN3-240ENST00000556339 ATMINO43313 823 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-240ENST00000556339 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-240ENST00000556339 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
ATXN3-240ENST00000556339 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
ATXN3-240ENST00000556339 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
ATXN3-240ENST00000556339 NUBP1P53384 320 aa10.44□□□□□ -0.74
ATXN3-240ENST00000556339 C7P10643 843 aa10.42□□□□□ -0.74
ATXN3-240ENST00000556339 KLHL34Q8N239 644 aa10.42□□□□□ -0.74
ATXN3-240ENST00000556339 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
ATXN3-240ENST00000556339 ATN1P54259 1190 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-240ENST00000556339 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
ATXN3-240ENST00000556339 TIE1P35590 1138 aa10.39□□□□□ -0.75
ATXN3-240ENST00000556339 BMP2KQ9NSY1 1161 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-240ENST00000556339 TRPC6Q9Y210 931 aa10.38□□□□□ -0.75
ATXN3-240ENST00000556339 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-240ENST00000556339 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
ATXN3-240ENST00000556339 SGIP1Q9BQI5 828 aa10.36□□□□□ -0.75
ATXN3-240ENST00000556339 OTUD5Q96G74 571 aa10.34□□□□□ -0.75
ATXN3-240ENST00000556339 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
ATXN3-240ENST00000556339 SEC24BO95487 1268 aa10.32□□□□□ -0.76
ATXN3-240ENST00000556339 PYGBP11216 843 aa10.32□□□□□ -0.76
ATXN3-240ENST00000556339 MAMSTRQ6ZN01 415 aa10.31□□□□□ -0.76
ATXN3-240ENST00000556339 IFNL1Q8IU54 200 aa10.31□□□□□ -0.76
ATXN3-240ENST00000556339 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
ATXN3-240ENST00000556339 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
ATXN3-240ENST00000556339 SCUBE2Q9NQ36 999 aa10.28□□□□□ -0.76
ATXN3-240ENST00000556339 GSE1Q14687 1217 aa10.27□□□□□ -0.77
ATXN3-240ENST00000556339 IER5LQ5T953 404 aa10.23□□□□□ -0.77
ATXN3-240ENST00000556339 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
ATXN3-240ENST00000556339 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
ATXN3-240ENST00000556339 POTEFA5A3E0 1075 aa10.19□□□□□ -0.78
ATXN3-240ENST00000556339 PLCG2P16885 1265 aa10.19□□□□□ -0.78
ATXN3-240ENST00000556339 SPOCK2Q92563 424 aa10.19□□□□□ -0.78
ATXN3-240ENST00000556339 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-240ENST00000556339 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-240ENST00000556339 CIZ1Q9ULV3 898 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-240ENST00000556339 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
ATXN3-240ENST00000556339 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.78
ATXN3-240ENST00000556339 POTEMA6NI47 508 aa10.1□□□□□ -0.79
ATXN3-240ENST00000556339 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-240ENST00000556339 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-240ENST00000556339 MKRN3Q13064 507 aaKnown RBP10.08□□□□□ -0.8
ATXN3-240ENST00000556339 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
ATXN3-240ENST00000556339 OCEL1Q9H607 264 aa10.08□□□□□ -0.8
ATXN3-240ENST00000556339 IRX5P78411 483 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-240ENST00000556339 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
ATXN3-240ENST00000556339 PSEN1P49768 467 aa10.06□□□□□ -0.8
ATXN3-240ENST00000556339 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
ATXN3-240ENST00000556339 PDAP1Q13442 181 aaKnown RBP10.03□□□□□ -0.8
ATXN3-240ENST00000556339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.99□□□□□ -0.813e-6■■□□□ 13.5
ATXN3-240ENST00000556339 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.99□□□□□ -0.81
ATXN3-240ENST00000556339 TRIM41Q8WV44 630 aa9.98□□□□□ -0.81
ATXN3-240ENST00000556339 C3orf67Q6ZVT6 689 aa9.97□□□□□ -0.81
ATXN3-240ENST00000556339 CABP2Q9NPB3 220 aa9.97□□□□□ -0.81
ATXN3-240ENST00000556339 L3MBTL3Q96JM7 780 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-240ENST00000556339 G3V3G9 751 aa9.94□□□□□ -0.82
ATXN3-240ENST00000556339 PDCD7Q8N8D1 485 aaKnown RBP9.93□□□□□ -0.82
ATXN3-240ENST00000556339 LCE2DQ5TA82 110 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-240ENST00000556339 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
ATXN3-240ENST00000556339 SNPHO15079 494 aa9.89□□□□□ -0.83
ATXN3-240ENST00000556339 ST18O60284 1047 aa9.87□□□□□ -0.83
ATXN3-240ENST00000556339 RIOK3O14730 519 aaKnown RBP9.84□□□□□ -0.83
ATXN3-240ENST00000556339 DPY19L2Q6NUT2 758 aa9.83□□□□□ -0.84
ATXN3-240ENST00000556339 EFCAB3Q8N7B9 438 aa9.82□□□□□ -0.84
ATXN3-240ENST00000556339 BOLA1Q9Y3E2 137 aa9.81□□□□□ -0.84
ATXN3-240ENST00000556339 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-240ENST00000556339 TMEM121BQ9BXQ6 578 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-240ENST00000556339 CDAN1Q8IWY9 1227 aa9.79□□□□□ -0.84
ATXN3-240ENST00000556339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-240ENST00000556339 ILDR1Q86SU0 546 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-240ENST00000556339 ZFP91Q96JP5 570 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-240ENST00000556339 TAOK2Q9UL54 1235 aa9.78□□□□□ -0.84
ATXN3-240ENST00000556339 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-240ENST00000556339 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
ATXN3-240ENST00000556339 SOX12O15370 315 aa9.72□□□□□ -0.85
ATXN3-240ENST00000556339 ECM2O94769 699 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-240ENST00000556339 EMP3P54852 163 aa9.72□□□□□ -0.85
ATXN3-240ENST00000556339 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
ATXN3-240ENST00000556339 STK24Q9Y6E0 443 aa9.7□□□□□ -0.86
ATXN3-240ENST00000556339 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-240ENST00000556339 PHF8Q9UPP1 1060 aa9.68□□□□□ -0.86
ATXN3-240ENST00000556339 STK25O00506 426 aa9.67□□□□□ -0.86
ATXN3-240ENST00000556339 MICALL2Q8IY33 904 aa9.67□□□□□ -0.86
ATXN3-240ENST00000556339 RIMBP2O15034 1052 aa9.65□□□□□ -0.86
ATXN3-240ENST00000556339 NLRP6P59044 892 aa9.65□□□□□ -0.86
ATXN3-240ENST00000556339 DOK7Q18PE1 504 aa9.65□□□□□ -0.86
ATXN3-240ENST00000556339 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
ATXN3-240ENST00000556339 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
ATXN3-240ENST00000556339 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
ATXN3-240ENST00000556339 HOXB3P14651 431 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-240ENST00000556339 RGL2O15211 777 aa9.58□□□□□ -0.88
ATXN3-240ENST00000556339 PKD2Q13563 968 aa9.58□□□□□ -0.88
ATXN3-240ENST00000556339 ERBB3P21860 1342 aa9.56□□□□□ -0.88
ATXN3-240ENST00000556339 HOXB1P14653 301 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms