RNA–Protein interactions for RNA: ENST00000556321.1

PSMA3-210, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 500 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-210ENST00000556321 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
PSMA3-210ENST00000556321 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
PSMA3-210ENST00000556321 ZBTB47Q9UFB7 747 aaPredicted RBP10.77□□□□□ -0.69
PSMA3-210ENST00000556321 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
PSMA3-210ENST00000556321 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
PSMA3-210ENST00000556321 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
PSMA3-210ENST00000556321 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
PSMA3-210ENST00000556321 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
PSMA3-210ENST00000556321 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
PSMA3-210ENST00000556321 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
PSMA3-210ENST00000556321 GABBR2O75899 941 aa10.69□□□□□ -0.7
PSMA3-210ENST00000556321 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
PSMA3-210ENST00000556321 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
PSMA3-210ENST00000556321 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
PSMA3-210ENST00000556321 GSE1Q14687 1217 aa10.6□□□□□ -0.71
PSMA3-210ENST00000556321 RNF25Q96BH1 459 aaPredicted RBP10.59□□□□□ -0.71
PSMA3-210ENST00000556321 NUBP1P53384 320 aa10.56□□□□□ -0.72
PSMA3-210ENST00000556321 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
PSMA3-210ENST00000556321 NBR1Q14596 966 aa10.51□□□□□ -0.73
PSMA3-210ENST00000556321 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
PSMA3-210ENST00000556321 GTPBP6O43824 516 aaPredicted RBP10.47□□□□□ -0.73
PSMA3-210ENST00000556321 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.73
PSMA3-210ENST00000556321 DCAF8Q5TAQ9 597 aa10.44□□□□□ -0.74
PSMA3-210ENST00000556321 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
PSMA3-210ENST00000556321 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
PSMA3-210ENST00000556321 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
PSMA3-210ENST00000556321 CLEC11AQ9Y240 323 aa10.43□□□□□ -0.74
PSMA3-210ENST00000556321 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
PSMA3-210ENST00000556321 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
PSMA3-210ENST00000556321 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
PSMA3-210ENST00000556321 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
PSMA3-210ENST00000556321 STK25O00506 426 aa10.39□□□□□ -0.75
PSMA3-210ENST00000556321 CLCN6P51797 869 aa10.36□□□□□ -0.75
PSMA3-210ENST00000556321 POTEMA6NI47 508 aa10.34□□□□□ -0.75
PSMA3-210ENST00000556321 RYDENQ9NUL5 291 aaKnown RBP10.34□□□□□ -0.75
PSMA3-210ENST00000556321 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
PSMA3-210ENST00000556321 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
PSMA3-210ENST00000556321 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.31□□□□□ -0.76
PSMA3-210ENST00000556321 ZFP91Q96JP5 570 aaPredicted RBP10.31□□□□□ -0.76
PSMA3-210ENST00000556321 BCL11BQ9C0K0 894 aaPredicted RBP10.31□□□□□ -0.76
PSMA3-210ENST00000556321 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
PSMA3-210ENST00000556321 PCDH10Q9P2E7 1040 aa10.29□□□□□ -0.76
PSMA3-210ENST00000556321 STK24Q9Y6E0 443 aa10.29□□□□□ -0.76
PSMA3-210ENST00000556321 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
PSMA3-210ENST00000556321 POTEGQ6S5H5 508 aa10.28□□□□□ -0.76
PSMA3-210ENST00000556321 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
PSMA3-210ENST00000556321 PYGBP11216 843 aa10.22□□□□□ -0.77
PSMA3-210ENST00000556321 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
PSMA3-210ENST00000556321 OTUD5Q96G74 571 aa10.22□□□□□ -0.77
PSMA3-210ENST00000556321 ZNF467Q7Z7K2 595 aaPredicted RBP10.14□□□□□ -0.79
PSMA3-210ENST00000556321 TIMELESSQ9UNS1 1208 aa10.14□□□□□ -0.79
PSMA3-210ENST00000556321 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
PSMA3-210ENST00000556321 KCNV2Q8TDN2 545 aa10.12□□□□□ -0.79
PSMA3-210ENST00000556321 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
PSMA3-210ENST00000556321 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
PSMA3-210ENST00000556321 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
PSMA3-210ENST00000556321 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
PSMA3-210ENST00000556321 FARP1Q9Y4F1 1045 aaPredicted RBP10.09□□□□□ -0.79
PSMA3-210ENST00000556321 WDR70Q9NW82 654 aa10.08□□□□□ -0.8
PSMA3-210ENST00000556321 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
PSMA3-210ENST00000556321 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.07□□□□□ -0.8
PSMA3-210ENST00000556321 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
PSMA3-210ENST00000556321 LMOD2Q6P5Q4 547 aa10.06□□□□□ -0.8
PSMA3-210ENST00000556321 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
PSMA3-210ENST00000556321 MFRPQ9BY79 579 aa10.04□□□□□ -0.8
PSMA3-210ENST00000556321 TSPYL2Q9H2G4 693 aaPredicted RBP10.04□□□□□ -0.8
PSMA3-210ENST00000556321 PCDHB8Q9UN66 801 aa10.01□□□□□ -0.81
PSMA3-210ENST00000556321 PCDHB13Q9Y5F0 798 aa10.01□□□□□ -0.81
PSMA3-210ENST00000556321 PSEN1P49768 467 aa10□□□□□ -0.81
PSMA3-210ENST00000556321 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
PSMA3-210ENST00000556321 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
PSMA3-210ENST00000556321 ZRANB1Q9UGI0 708 aa9.97□□□□□ -0.81
PSMA3-210ENST00000556321 FBXO22Q8NEZ5 403 aa9.96□□□□□ -0.82
PSMA3-210ENST00000556321 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
PSMA3-210ENST00000556321 PPP1R37O75864 691 aa9.94□□□□□ -0.82
PSMA3-210ENST00000556321 SOX12O15370 315 aa9.92□□□□□ -0.82
PSMA3-210ENST00000556321 NLRP6P59044 892 aa9.92□□□□□ -0.82
PSMA3-210ENST00000556321 E2F4Q16254 413 aa9.92□□□□□ -0.82
PSMA3-210ENST00000556321 TESPA1A2RU30 521 aaPredicted RBP9.91□□□□□ -0.82
PSMA3-210ENST00000556321 BRPF1P55201 1214 aaPredicted RBP9.91□□□□□ -0.82
PSMA3-210ENST00000556321 ZC3H15Q8WU90 426 aaKnown RBP9.91□□□□□ -0.82
PSMA3-210ENST00000556321 MAMSTRQ6ZN01 415 aa9.9□□□□□ -0.82
PSMA3-210ENST00000556321 IFNL1Q8IU54 200 aa9.89□□□□□ -0.83
PSMA3-210ENST00000556321 EFCAB3Q8N7B9 438 aa9.89□□□□□ -0.83
PSMA3-210ENST00000556321 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
PSMA3-210ENST00000556321 PHF8Q9UPP1 1060 aa9.87□□□□□ -0.83
PSMA3-210ENST00000556321 ARXQ96QS3 562 aa9.86□□□□□ -0.83
PSMA3-210ENST00000556321 SEMA3EO15041 775 aa9.85□□□□□ -0.83
PSMA3-210ENST00000556321 KIF12Q96FN5 646 aa9.85□□□□□ -0.83
PSMA3-210ENST00000556321 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
PSMA3-210ENST00000556321 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
PSMA3-210ENST00000556321 MFSD10Q14728 455 aa9.84□□□□□ -0.83
PSMA3-210ENST00000556321 FAM163AQ96GL9 167 aaPredicted RBP9.84□□□□□ -0.83
PSMA3-210ENST00000556321 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
PSMA3-210ENST00000556321 MAP3K13O43283 966 aa9.83□□□□□ -0.84
PSMA3-210ENST00000556321 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
PSMA3-210ENST00000556321 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
PSMA3-210ENST00000556321 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
PSMA3-210ENST00000556321 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
PSMA3-210ENST00000556321 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms