RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CCDC61Q9Y6R9 512 aa10.75□□□□□ -0.69
ATXN3-239ENST00000556315 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
ATXN3-239ENST00000556315 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
ATXN3-239ENST00000556315 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
ATXN3-239ENST00000556315 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
ATXN3-239ENST00000556315 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
ATXN3-239ENST00000556315 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
ATXN3-239ENST00000556315 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-239ENST00000556315 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-239ENST00000556315 NUBP1P53384 320 aa10.64□□□□□ -0.71
ATXN3-239ENST00000556315 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
ATXN3-239ENST00000556315 MAP3K13O43283 966 aa10.6□□□□□ -0.71
ATXN3-239ENST00000556315 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
ATXN3-239ENST00000556315 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
ATXN3-239ENST00000556315 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
ATXN3-239ENST00000556315 TRPC6Q9Y210 931 aa10.56□□□□□ -0.72
ATXN3-239ENST00000556315 C7P10643 843 aa10.55□□□□□ -0.72
ATXN3-239ENST00000556315 ATN1P54259 1190 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-239ENST00000556315 SGIP1Q9BQI5 828 aa10.55□□□□□ -0.72
ATXN3-239ENST00000556315 METRNQ9UJH8 293 aa10.55□□□□□ -0.72
ATXN3-239ENST00000556315 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
ATXN3-239ENST00000556315 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-239ENST00000556315 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
ATXN3-239ENST00000556315 TIE1P35590 1138 aa10.53□□□□□ -0.72
ATXN3-239ENST00000556315 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
ATXN3-239ENST00000556315 PCDHB13Q9Y5F0 798 aa10.48□□□□□ -0.73
ATXN3-239ENST00000556315 NACADO15069 1562 aa10.48□□□□□ -0.73
ATXN3-239ENST00000556315 VASPP50552 380 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-239ENST00000556315 TTLL13PA6NNM8 815 aa10.46□□□□□ -0.73
ATXN3-239ENST00000556315 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
ATXN3-239ENST00000556315 POTEFA5A3E0 1075 aa10.44□□□□□ -0.74
ATXN3-239ENST00000556315 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
ATXN3-239ENST00000556315 DCAF8Q5TAQ9 597 aa10.42□□□□□ -0.74
ATXN3-239ENST00000556315 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
ATXN3-239ENST00000556315 TRIM35Q9UPQ4 493 aa10.38□□□□□ -0.75
ATXN3-239ENST00000556315 PYGBP11216 843 aa10.37□□□□□ -0.75
ATXN3-239ENST00000556315 IER5LQ5T953 404 aa10.37□□□□□ -0.75
ATXN3-239ENST00000556315 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
ATXN3-239ENST00000556315 COLQQ9Y215 455 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-239ENST00000556315 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
ATXN3-239ENST00000556315 GSE1Q14687 1217 aa10.34□□□□□ -0.75
ATXN3-239ENST00000556315 SEC24BO95487 1268 aa10.31□□□□□ -0.76
ATXN3-239ENST00000556315 SCUBE2Q9NQ36 999 aa10.31□□□□□ -0.76
ATXN3-239ENST00000556315 CHRM1P11229 460 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-239ENST00000556315 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-239ENST00000556315 PCDHB8Q9UN66 801 aa10.3□□□□□ -0.76
ATXN3-239ENST00000556315 MYO15BQ96JP2 1530 aa10.27□□□□□ -0.77
ATXN3-239ENST00000556315 IRX5P78411 483 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-239ENST00000556315 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
ATXN3-239ENST00000556315 SPOCK2Q92563 424 aa10.25□□□□□ -0.77
ATXN3-239ENST00000556315 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
ATXN3-239ENST00000556315 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
ATXN3-239ENST00000556315 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
ATXN3-239ENST00000556315 PLCG2P16885 1265 aa10.21□□□□□ -0.77
ATXN3-239ENST00000556315 POTEMA6NI47 508 aa10.2□□□□□ -0.78
ATXN3-239ENST00000556315 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-239ENST00000556315 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
ATXN3-239ENST00000556315 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
ATXN3-239ENST00000556315 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
ATXN3-239ENST00000556315 PSEN1P49768 467 aa10.15□□□□□ -0.78
ATXN3-239ENST00000556315 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
ATXN3-239ENST00000556315 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
ATXN3-239ENST00000556315 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-239ENST00000556315 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
ATXN3-239ENST00000556315 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
ATXN3-239ENST00000556315 PDCD7Q8N8D1 485 aaKnown RBP10.11□□□□□ -0.79
ATXN3-239ENST00000556315 SLAIN1Q8ND83 568 aa10.11□□□□□ -0.79
ATXN3-239ENST00000556315 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
ATXN3-239ENST00000556315 GOLGA2Q08379 1002 aa10.08□□□□□ -0.8
ATXN3-239ENST00000556315 TRIM41Q8WV44 630 aa10.08□□□□□ -0.8
ATXN3-239ENST00000556315 ILDR1Q86SU0 546 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-239ENST00000556315 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
ATXN3-239ENST00000556315 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
ATXN3-239ENST00000556315 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
ATXN3-239ENST00000556315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.04□□□□□ -0.83e-6■■□□□ 13.5
ATXN3-239ENST00000556315 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
ATXN3-239ENST00000556315 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
ATXN3-239ENST00000556315 L3MBTL3Q96JM7 780 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-239ENST00000556315 CABP2Q9NPB3 220 aa10.01□□□□□ -0.81
ATXN3-239ENST00000556315 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
ATXN3-239ENST00000556315 ST18O60284 1047 aa9.99□□□□□ -0.81
ATXN3-239ENST00000556315 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
ATXN3-239ENST00000556315 SNPHO15079 494 aa9.95□□□□□ -0.82
ATXN3-239ENST00000556315 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
ATXN3-239ENST00000556315 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
ATXN3-239ENST00000556315 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-239ENST00000556315 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
ATXN3-239ENST00000556315 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-239ENST00000556315 EFCAB3Q8N7B9 438 aa9.9□□□□□ -0.82
ATXN3-239ENST00000556315 BOLA1Q9Y3E2 137 aa9.9□□□□□ -0.82
ATXN3-239ENST00000556315 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
ATXN3-239ENST00000556315 VGFO15240 615 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-239ENST00000556315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-239ENST00000556315 ZFP91Q96JP5 570 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-239ENST00000556315 CUX2O14529 1486 aa9.85□□□□□ -0.83
ATXN3-239ENST00000556315 G3V3G9 751 aa9.84□□□□□ -0.83
ATXN3-239ENST00000556315 SOX12O15370 315 aa9.84□□□□□ -0.83
ATXN3-239ENST00000556315 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
ATXN3-239ENST00000556315 MS4A4AQ96JQ5 239 aa9.8□□□□□ -0.84
ATXN3-239ENST00000556315 HOXB3P14651 431 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms