RNA–Protein interactions for RNA: ENST00000555425.5

SEC23A-210, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5

Gene SEC23A, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-210ENST00000555425 ASTLQ6HA08 431 aaPredicted RBP11.04□□□□□ -0.64
SEC23A-210ENST00000555425 SCUBE2Q9NQ36 999 aa10.99□□□□□ -0.65
SEC23A-210ENST00000555425 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
SEC23A-210ENST00000555425 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
SEC23A-210ENST00000555425 MS4A3Q96HJ5 214 aa10.97□□□□□ -0.65
SEC23A-210ENST00000555425 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
SEC23A-210ENST00000555425 FAM163AQ96GL9 167 aaPredicted RBP10.96□□□□□ -0.65
SEC23A-210ENST00000555425 MNX1P50219 401 aaPredicted RBP10.9□□□□□ -0.66
SEC23A-210ENST00000555425 ATN1P54259 1190 aaPredicted RBP10.84□□□□□ -0.67
SEC23A-210ENST00000555425 SPDYE4A6NLX3 237 aa10.83□□□□□ -0.68
SEC23A-210ENST00000555425 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
SEC23A-210ENST00000555425 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
SEC23A-210ENST00000555425 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
SEC23A-210ENST00000555425 CCDC61Q9Y6R9 512 aa10.74□□□□□ -0.69
SEC23A-210ENST00000555425 BMP2KQ9NSY1 1161 aaPredicted RBP10.73□□□□□ -0.69
SEC23A-210ENST00000555425 TIE1P35590 1138 aa10.72□□□□□ -0.69
SEC23A-210ENST00000555425 KIF12Q96FN5 646 aa10.72□□□□□ -0.69
SEC23A-210ENST00000555425 SEC24BO95487 1268 aa10.69□□□□□ -0.7
SEC23A-210ENST00000555425 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
SEC23A-210ENST00000555425 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
SEC23A-210ENST00000555425 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
SEC23A-210ENST00000555425 MAP3K13O43283 966 aa10.61□□□□□ -0.71
SEC23A-210ENST00000555425 IER5LQ5T953 404 aa10.61□□□□□ -0.71
SEC23A-210ENST00000555425 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
SEC23A-210ENST00000555425 ST18O60284 1047 aa10.59□□□□□ -0.71
SEC23A-210ENST00000555425 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
SEC23A-210ENST00000555425 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
SEC23A-210ENST00000555425 EHMT2Q96KQ7 1210 aa10.57□□□□□ -0.72
SEC23A-210ENST00000555425 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
SEC23A-210ENST00000555425 TRIM35Q9UPQ4 493 aa10.55□□□□□ -0.72
SEC23A-210ENST00000555425 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
SEC23A-210ENST00000555425 CCDC180Q9P1Z9 1646 aa10.53□□□□□ -0.72
SEC23A-210ENST00000555425 TMEM121BQ9BXQ6 578 aaPredicted RBP10.52□□□□□ -0.73
SEC23A-210ENST00000555425 SGIP1Q9BQI5 828 aa10.51□□□□□ -0.73
SEC23A-210ENST00000555425 RASEFQ8IZ41 740 aa10.48□□□□□ -0.73
SEC23A-210ENST00000555425 PLCG2P16885 1265 aa10.46□□□□□ -0.73
SEC23A-210ENST00000555425 PROM2Q8N271 834 aa10.46□□□□□ -0.73
SEC23A-210ENST00000555425 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
SEC23A-210ENST00000555425 SNPHO15079 494 aa10.45□□□□□ -0.74
SEC23A-210ENST00000555425 MIER1Q8N108 512 aa10.41□□□□□ -0.74
SEC23A-210ENST00000555425 TMEM106CQ9BVX2 250 aa10.38□□□□□ -0.75
SEC23A-210ENST00000555425 IRX5P78411 483 aaPredicted RBP10.36□□□□□ -0.75
SEC23A-210ENST00000555425 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
SEC23A-210ENST00000555425 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
SEC23A-210ENST00000555425 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
SEC23A-210ENST00000555425 OCEL1Q9H607 264 aa10.32□□□□□ -0.76
SEC23A-210ENST00000555425 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
SEC23A-210ENST00000555425 EMP3P54852 163 aa10.27□□□□□ -0.77
SEC23A-210ENST00000555425 PLCD3Q8N3E9 789 aa10.27□□□□□ -0.77
SEC23A-210ENST00000555425 FAM212AQ96EL1 285 aa10.26□□□□□ -0.77
SEC23A-210ENST00000555425 NUBP1P53384 320 aa10.24□□□□□ -0.77
SEC23A-210ENST00000555425 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
SEC23A-210ENST00000555425 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
SEC23A-210ENST00000555425 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
SEC23A-210ENST00000555425 HS3ST6Q96QI5 342 aa10.2□□□□□ -0.78
SEC23A-210ENST00000555425 FAM205CA6NFA0 338 aa10.16□□□□□ -0.78
SEC23A-210ENST00000555425 L3MBTL3Q96JM7 780 aaPredicted RBP10.13□□□□□ -0.79
SEC23A-210ENST00000555425 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
SEC23A-210ENST00000555425 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
SEC23A-210ENST00000555425 PDCD7Q8N8D1 485 aaKnown RBP10.09□□□□□ -0.79
SEC23A-210ENST00000555425 PYGBP11216 843 aa10.07□□□□□ -0.8
SEC23A-210ENST00000555425 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
SEC23A-210ENST00000555425 MKRN3Q13064 507 aaKnown RBP10.06□□□□□ -0.8
SEC23A-210ENST00000555425 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
SEC23A-210ENST00000555425 PCDHB8Q9UN66 801 aa10.05□□□□□ -0.8
SEC23A-210ENST00000555425 ABCC9O60706 1549 aa10.04□□□□□ -0.8
SEC23A-210ENST00000555425 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
SEC23A-210ENST00000555425 ZNF467Q7Z7K2 595 aaPredicted RBP9.99□□□□□ -0.81
SEC23A-210ENST00000555425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.99□□□□□ -0.812e-14■□□□□ 11.1
SEC23A-210ENST00000555425 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
SEC23A-210ENST00000555425 ZNF710Q8N1W2 664 aa9.95□□□□□ -0.82
SEC23A-210ENST00000555425 ERBB3P21860 1342 aa9.95□□□□□ -0.82
SEC23A-210ENST00000555425 G3V3G9 751 aa9.94□□□□□ -0.82
SEC23A-210ENST00000555425 MYT1LQ9UL68 1186 aa9.94□□□□□ -0.82
SEC23A-210ENST00000555425 HOXB3P14651 431 aaPredicted RBP9.92□□□□□ -0.82
SEC23A-210ENST00000555425 DOK7Q18PE1 504 aa9.91□□□□□ -0.82
SEC23A-210ENST00000555425 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
SEC23A-210ENST00000555425 RIMBP2O15034 1052 aa9.88□□□□□ -0.83
SEC23A-210ENST00000555425 PTGER2P43116 358 aa9.88□□□□□ -0.83
SEC23A-210ENST00000555425 PSEN1P49768 467 aa9.87□□□□□ -0.83
SEC23A-210ENST00000555425 GSE1Q14687 1217 aa9.87□□□□□ -0.83
SEC23A-210ENST00000555425 BOLA1Q9Y3E2 137 aa9.87□□□□□ -0.83
SEC23A-210ENST00000555425 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
SEC23A-210ENST00000555425 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
SEC23A-210ENST00000555425 NACADO15069 1562 aa9.84□□□□□ -0.83
SEC23A-210ENST00000555425 RB1CC1Q8TDY2 1594 aa9.83□□□□□ -0.84
SEC23A-210ENST00000555425 DPY19L2Q6NUT2 758 aa9.82□□□□□ -0.84
SEC23A-210ENST00000555425 CHRM1P11229 460 aaPredicted RBP9.81□□□□□ -0.84
SEC23A-210ENST00000555425 ZNF687Q8N1G0 1237 aa9.8□□□□□ -0.84
SEC23A-210ENST00000555425 PDAP1Q13442 181 aaKnown RBP9.79□□□□□ -0.84
SEC23A-210ENST00000555425 ZSWIM6Q9HCJ5 1215 aa9.78□□□□□ -0.84
SEC23A-210ENST00000555425 DCAF1Q9Y4B6 1507 aa9.77□□□□□ -0.84
SEC23A-210ENST00000555425 ZCCHC6Q5VYS8 1495 aaKnown RBP9.75□□□□□ -0.85
SEC23A-210ENST00000555425 CABP2Q9NPB3 220 aa9.75□□□□□ -0.85
SEC23A-210ENST00000555425 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
SEC23A-210ENST00000555425 KLHL34Q8N239 644 aa9.71□□□□□ -0.86
SEC23A-210ENST00000555425 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
SEC23A-210ENST00000555425 FKBP8Q14318 412 aa9.66□□□□□ -0.86
SEC23A-210ENST00000555425 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
SEC23A-210ENST00000555425 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms