RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 GALR2O43603 387 aaPredicted RBP8.92□□□□□ -0.98
CPSF2-204ENST00000555244 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
CPSF2-204ENST00000555244 KLHL34Q8N239 644 aa8.91□□□□□ -0.98
CPSF2-204ENST00000555244 CLCN6P51797 869 aa8.9□□□□□ -0.98
CPSF2-204ENST00000555244 DCBLD2Q96PD2 775 aa8.9□□□□□ -0.98
CPSF2-204ENST00000555244 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
CPSF2-204ENST00000555244 ABCC9O60706 1549 aa8.87□□□□□ -0.99
CPSF2-204ENST00000555244 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
CPSF2-204ENST00000555244 CCDC61Q9Y6R9 512 aa8.86□□□□□ -0.99
CPSF2-204ENST00000555244 NUBP1P53384 320 aa8.84□□□□□ -0.99
CPSF2-204ENST00000555244 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
CPSF2-204ENST00000555244 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
CPSF2-204ENST00000555244 DCAF8Q5TAQ9 597 aa8.8□□□□□ -1
CPSF2-204ENST00000555244 FAM212AQ96EL1 285 aa8.8□□□□□ -1
CPSF2-204ENST00000555244 KIF12Q96FN5 646 aa8.8□□□□□ -1
CPSF2-204ENST00000555244 MAP3K13O43283 966 aa8.79□□□□□ -1
CPSF2-204ENST00000555244 LHX8Q68G74 356 aa8.74□□□□□ -1.01
CPSF2-204ENST00000555244 TRPC6Q9Y210 931 aa8.74□□□□□ -1.01
CPSF2-204ENST00000555244 PYGBP11216 843 aa8.73□□□□□ -1.01
CPSF2-204ENST00000555244 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
CPSF2-204ENST00000555244 PKD2Q13563 968 aa8.72□□□□□ -1.01
CPSF2-204ENST00000555244 PELP1Q8IZL8 1130 aaKnown RBP8.72□□□□□ -1.01
CPSF2-204ENST00000555244 ATMINO43313 823 aaPredicted RBP8.7□□□□□ -1.02
CPSF2-204ENST00000555244 DCAF8L2P0C7V8 631 aa8.69□□□□□ -1.02
CPSF2-204ENST00000555244 ASTLQ6HA08 431 aaPredicted RBP8.69□□□□□ -1.02
CPSF2-204ENST00000555244 SLC24A1O60721 1099 aa8.68□□□□□ -1.02
CPSF2-204ENST00000555244 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
CPSF2-204ENST00000555244 ATN1P54259 1190 aaPredicted RBP8.68□□□□□ -1.02
CPSF2-204ENST00000555244 IFNL1Q8IU54 200 aa8.68□□□□□ -1.02
CPSF2-204ENST00000555244 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
CPSF2-204ENST00000555244 CIZ1Q9ULV3 898 aaPredicted RBP8.67□□□□□ -1.02
CPSF2-204ENST00000555244 GSE1Q14687 1217 aa8.66□□□□□ -1.02
CPSF2-204ENST00000555244 SGIP1Q9BQI5 828 aa8.65□□□□□ -1.02
CPSF2-204ENST00000555244 TIE1P35590 1138 aa8.64□□□□□ -1.03
CPSF2-204ENST00000555244 METRNQ9UJH8 293 aa8.64□□□□□ -1.03
CPSF2-204ENST00000555244 TTLL13PA6NNM8 815 aa8.63□□□□□ -1.03
CPSF2-204ENST00000555244 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
CPSF2-204ENST00000555244 PCDHB8Q9UN66 801 aa8.63□□□□□ -1.03
CPSF2-204ENST00000555244 SLC39A7Q92504 469 aa8.62□□□□□ -1.03
CPSF2-204ENST00000555244 POTEB2H3BUK9 544 aa8.61□□□□□ -1.03
CPSF2-204ENST00000555244 C7P10643 843 aa8.6□□□□□ -1.03
CPSF2-204ENST00000555244 TMEM106CQ9BVX2 250 aa8.6□□□□□ -1.03
CPSF2-204ENST00000555244 TRIM35Q9UPQ4 493 aa8.59□□□□□ -1.03
CPSF2-204ENST00000555244 MYO15BQ96JP2 1530 aa8.56□□□□□ -1.04
CPSF2-204ENST00000555244 NACADO15069 1562 aa8.56□□□□□ -1.04
CPSF2-204ENST00000555244 SEC24BO95487 1268 aa8.55□□□□□ -1.04
CPSF2-204ENST00000555244 RB1CC1Q8TDY2 1594 aa8.55□□□□□ -1.04
CPSF2-204ENST00000555244 RGL2O15211 777 aa8.54□□□□□ -1.04
CPSF2-204ENST00000555244 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
CPSF2-204ENST00000555244 POTEFA5A3E0 1075 aa8.53□□□□□ -1.04
CPSF2-204ENST00000555244 CHRM1P11229 460 aaPredicted RBP8.53□□□□□ -1.04
CPSF2-204ENST00000555244 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
CPSF2-204ENST00000555244 COLQQ9Y215 455 aaPredicted RBP8.52□□□□□ -1.05
CPSF2-204ENST00000555244 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
CPSF2-204ENST00000555244 TAOK2Q9UL54 1235 aa8.5□□□□□ -1.05
CPSF2-204ENST00000555244 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
CPSF2-204ENST00000555244 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.49□□□□□ -1.05
CPSF2-204ENST00000555244 PSEN1P49768 467 aa8.48□□□□□ -1.05
CPSF2-204ENST00000555244 BBXQ8WY36 941 aaPredicted RBP8.48□□□□□ -1.05
CPSF2-204ENST00000555244 GOLGA2Q08379 1002 aa8.47□□□□□ -1.05
CPSF2-204ENST00000555244 IER5LQ5T953 404 aa8.47□□□□□ -1.05
CPSF2-204ENST00000555244 DCAF1Q9Y4B6 1507 aa8.47□□□□□ -1.05
CPSF2-204ENST00000555244 ZCCHC6Q5VYS8 1495 aaKnown RBP8.45□□□□□ -1.06
CPSF2-204ENST00000555244 PLCG2P16885 1265 aa8.45□□□□□ -1.06
CPSF2-204ENST00000555244 RIOK3O14730 519 aaKnown RBP8.44□□□□□ -1.06
CPSF2-204ENST00000555244 CHGAP10645 457 aaKnown RBP8.44□□□□□ -1.06
CPSF2-204ENST00000555244 PDAP1Q13442 181 aaKnown RBP8.44□□□□□ -1.06
CPSF2-204ENST00000555244 MKRN3Q13064 507 aaKnown RBP8.43□□□□□ -1.06
CPSF2-204ENST00000555244 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
CPSF2-204ENST00000555244 SCUBE2Q9NQ36 999 aa8.43□□□□□ -1.06
CPSF2-204ENST00000555244 IRX5P78411 483 aaPredicted RBP8.42□□□□□ -1.06
CPSF2-204ENST00000555244 CABP2Q9NPB3 220 aa8.41□□□□□ -1.06
CPSF2-204ENST00000555244 RNF25Q96BH1 459 aaPredicted RBP8.4□□□□□ -1.06
CPSF2-204ENST00000555244 OCEL1Q9H607 264 aa8.4□□□□□ -1.06
CPSF2-204ENST00000555244 VGFO15240 615 aaPredicted RBP8.39□□□□□ -1.07
CPSF2-204ENST00000555244 HS6ST3Q8IZP7 471 aa8.39□□□□□ -1.07
CPSF2-204ENST00000555244 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
CPSF2-204ENST00000555244 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
CPSF2-204ENST00000555244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.37□□□□□ -1.071e-6■■■□□ 17.4
CPSF2-204ENST00000555244 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
CPSF2-204ENST00000555244 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
CPSF2-204ENST00000555244 STK25O00506 426 aa8.34□□□□□ -1.07
CPSF2-204ENST00000555244 PDCD7Q8N8D1 485 aaKnown RBP8.34□□□□□ -1.07
CPSF2-204ENST00000555244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.33□□□□□ -1.08
CPSF2-204ENST00000555244 ZFP91Q96JP5 570 aaPredicted RBP8.33□□□□□ -1.08
CPSF2-204ENST00000555244 EFCAB3Q8N7B9 438 aa8.32□□□□□ -1.08
CPSF2-204ENST00000555244 SLAIN1Q8ND83 568 aa8.32□□□□□ -1.08
CPSF2-204ENST00000555244 DNAJC5Q9H3Z4 198 aa8.32□□□□□ -1.08
CPSF2-204ENST00000555244 BICRAQ9NZM4 1560 aa8.31□□□□□ -1.08
CPSF2-204ENST00000555244 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
CPSF2-204ENST00000555244 FAM163AQ96GL9 167 aaPredicted RBP8.31□□□□□ -1.08
CPSF2-204ENST00000555244 UNC13AQ9UPW8 1703 aa8.31□□□□□ -1.08
CPSF2-204ENST00000555244 STK24Q9Y6E0 443 aa8.29□□□□□ -1.08
CPSF2-204ENST00000555244 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
CPSF2-204ENST00000555244 BCL11BQ9C0K0 894 aaPredicted RBP8.28□□□□□ -1.08
CPSF2-204ENST00000555244 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.28□□□□□ -1.08
CPSF2-204ENST00000555244 VSIG10Q8N0Z9 540 aa8.27□□□□□ -1.09
CPSF2-204ENST00000555244 L3MBTL3Q96JM7 780 aaPredicted RBP8.27□□□□□ -1.09
CPSF2-204ENST00000555244 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
CPSF2-204ENST00000555244 RYDENQ9NUL5 291 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms