RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 NUBP1P53384 320 aa6.99□□□□□ -1.29
SEC23A-208ENST00000555017 RASEFQ8IZ41 740 aa6.99□□□□□ -1.29
SEC23A-208ENST00000555017 LCE2DQ5TA82 110 aaPredicted RBP6.97□□□□□ -1.29
SEC23A-208ENST00000555017 TSPYL2Q9H2G4 693 aaPredicted RBP6.96□□□□□ -1.3
SEC23A-208ENST00000555017 PLEKHG5O94827 1062 aa6.95□□□□□ -1.3
SEC23A-208ENST00000555017 CD44P16070 742 aaKnown RBP6.95□□□□□ -1.3
SEC23A-208ENST00000555017 NPM1P06748 294 aaKnown RBP eCLIP6.93□□□□□ -1.3
SEC23A-208ENST00000555017 SPOCK2Q92563 424 aa6.93□□□□□ -1.3
SEC23A-208ENST00000555017 FAM163AQ96GL9 167 aaPredicted RBP6.93□□□□□ -1.3
SEC23A-208ENST00000555017 ZRANB1Q9UGI0 708 aa6.92□□□□□ -1.3
SEC23A-208ENST00000555017 PHF12Q96QT6 1004 aa6.91□□□□□ -1.3
SEC23A-208ENST00000555017 DCAF8Q5TAQ9 597 aa6.9□□□□□ -1.3
SEC23A-208ENST00000555017 CDAN1Q8IWY9 1227 aa6.9□□□□□ -1.3
SEC23A-208ENST00000555017 ZBTB47Q9UFB7 747 aaPredicted RBP6.89□□□□□ -1.31
SEC23A-208ENST00000555017 CIZ1Q9ULV3 898 aaPredicted RBP6.87□□□□□ -1.31
SEC23A-208ENST00000555017 CCDC61Q9Y6R9 512 aa6.87□□□□□ -1.31
SEC23A-208ENST00000555017 PYGBP11216 843 aa6.85□□□□□ -1.31
SEC23A-208ENST00000555017 MAMSTRQ6ZN01 415 aa6.84□□□□□ -1.31
SEC23A-208ENST00000555017 MMRN1Q13201 1228 aa6.83□□□□□ -1.32
SEC23A-208ENST00000555017 PKD2Q13563 968 aa6.83□□□□□ -1.32
SEC23A-208ENST00000555017 ZNF579Q8NAF0 562 aaKnown RBP6.83□□□□□ -1.32
SEC23A-208ENST00000555017 FAM212AQ96EL1 285 aa6.83□□□□□ -1.32
SEC23A-208ENST00000555017 MAP3K13O43283 966 aa6.82□□□□□ -1.32
SEC23A-208ENST00000555017 GALR2O43603 387 aaPredicted RBP6.82□□□□□ -1.32
SEC23A-208ENST00000555017 PAK3O75914 559 aaPredicted RBP6.82□□□□□ -1.32
SEC23A-208ENST00000555017 KIF12Q96FN5 646 aa6.82□□□□□ -1.32
SEC23A-208ENST00000555017 TRPC6Q9Y210 931 aa6.82□□□□□ -1.32
SEC23A-208ENST00000555017 MS4A3Q96HJ5 214 aa6.8□□□□□ -1.32
SEC23A-208ENST00000555017 GSE1Q14687 1217 aa6.79□□□□□ -1.32
SEC23A-208ENST00000555017 RTN4Q9NQC3 1192 aaKnown RBP6.79□□□□□ -1.32
SEC23A-208ENST00000555017 POTEJP0CG39 1038 aa6.78□□□□□ -1.32
SEC23A-208ENST00000555017 PCDHB8Q9UN66 801 aa6.78□□□□□ -1.32
SEC23A-208ENST00000555017 PCDHB13Q9Y5F0 798 aa6.78□□□□□ -1.32
SEC23A-208ENST00000555017 RNF25Q96BH1 459 aaPredicted RBP6.77□□□□□ -1.33
SEC23A-208ENST00000555017 IFNL1Q8IU54 200 aa6.76□□□□□ -1.33
SEC23A-208ENST00000555017 RGL2O15211 777 aa6.75□□□□□ -1.33
SEC23A-208ENST00000555017 SPNS2Q8IVW8 549 aa6.75□□□□□ -1.33
SEC23A-208ENST00000555017 ECM2O94769 699 aaPredicted RBP6.74□□□□□ -1.33
SEC23A-208ENST00000555017 PELP1Q8IZL8 1130 aaKnown RBP6.73□□□□□ -1.33
SEC23A-208ENST00000555017 CHRM1P11229 460 aaPredicted RBP6.72□□□□□ -1.33
SEC23A-208ENST00000555017 SCUBE2Q9NQ36 999 aa6.72□□□□□ -1.33
SEC23A-208ENST00000555017 METRNQ9UJH8 293 aa6.69□□□□□ -1.34
SEC23A-208ENST00000555017 C7P10643 843 aa6.68□□□□□ -1.34
SEC23A-208ENST00000555017 BMP2KQ9NSY1 1161 aaPredicted RBP6.68□□□□□ -1.34
SEC23A-208ENST00000555017 ATN1P54259 1190 aaPredicted RBP6.67□□□□□ -1.34
SEC23A-208ENST00000555017 SLC39A7Q92504 469 aa6.66□□□□□ -1.34
SEC23A-208ENST00000555017 SGIP1Q9BQI5 828 aa6.66□□□□□ -1.34
SEC23A-208ENST00000555017 TTLL13PA6NNM8 815 aa6.65□□□□□ -1.34
SEC23A-208ENST00000555017 ATMINO43313 823 aaPredicted RBP6.65□□□□□ -1.34
SEC23A-208ENST00000555017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.64□□□□□ -1.35
SEC23A-208ENST00000555017 RIOK3O14730 519 aaKnown RBP6.64□□□□□ -1.35
SEC23A-208ENST00000555017 PSEN1P49768 467 aa6.64□□□□□ -1.35
SEC23A-208ENST00000555017 AMER1Q5JTC6 1135 aaPredicted RBP6.64□□□□□ -1.35
SEC23A-208ENST00000555017 TRIM41Q8WV44 630 aa6.64□□□□□ -1.35
SEC23A-208ENST00000555017 ZFP91Q96JP5 570 aaPredicted RBP6.64□□□□□ -1.35
SEC23A-208ENST00000555017 TMEM106CQ9BVX2 250 aa6.64□□□□□ -1.35
SEC23A-208ENST00000555017 ZNF467Q7Z7K2 595 aaPredicted RBP6.63□□□□□ -1.35
SEC23A-208ENST00000555017 ASTLQ6HA08 431 aaPredicted RBP6.62□□□□□ -1.35
SEC23A-208ENST00000555017 TIE1P35590 1138 aa6.61□□□□□ -1.35
SEC23A-208ENST00000555017 PDAP1Q13442 181 aaKnown RBP6.6□□□□□ -1.35
SEC23A-208ENST00000555017 TRIM35Q9UPQ4 493 aa6.6□□□□□ -1.35
SEC23A-208ENST00000555017 POTEFA5A3E0 1075 aa6.59□□□□□ -1.35
SEC23A-208ENST00000555017 DCAF8L2P0C7V8 631 aa6.59□□□□□ -1.35
SEC23A-208ENST00000555017 VGFO15240 615 aaPredicted RBP6.58□□□□□ -1.36
SEC23A-208ENST00000555017 CABP2Q9NPB3 220 aa6.58□□□□□ -1.36
SEC23A-208ENST00000555017 BCL11BQ9C0K0 894 aaPredicted RBP6.57□□□□□ -1.36
SEC23A-208ENST00000555017 STK25O00506 426 aa6.56□□□□□ -1.36
SEC23A-208ENST00000555017 CHGAP10645 457 aaKnown RBP6.56□□□□□ -1.36
SEC23A-208ENST00000555017 EFCAB3Q8N7B9 438 aa6.56□□□□□ -1.36
SEC23A-208ENST00000555017 COLQQ9Y215 455 aaPredicted RBP6.56□□□□□ -1.36
SEC23A-208ENST00000555017 STK24Q9Y6E0 443 aa6.56□□□□□ -1.36
SEC23A-208ENST00000555017 ST18O60284 1047 aa6.54□□□□□ -1.36
SEC23A-208ENST00000555017 DPY19L2Q6NUT2 758 aa6.53□□□□□ -1.36
SEC23A-208ENST00000555017 NKX1-1Q15270 411 aaPredicted RBP6.52□□□□□ -1.37
SEC23A-208ENST00000555017 IRX5P78411 483 aaPredicted RBP6.51□□□□□ -1.37
SEC23A-208ENST00000555017 HS6ST3Q8IZP7 471 aa6.51□□□□□ -1.37
SEC23A-208ENST00000555017 PHF8Q9UPP1 1060 aa6.5□□□□□ -1.37
SEC23A-208ENST00000555017 MKRN3Q13064 507 aaKnown RBP6.49□□□□□ -1.37
SEC23A-208ENST00000555017 PDCD7Q8N8D1 485 aaKnown RBP6.49□□□□□ -1.37
SEC23A-208ENST00000555017 MS4A4AQ96JQ5 239 aa6.49□□□□□ -1.37
SEC23A-208ENST00000555017 MFRPQ9BY79 579 aa6.49□□□□□ -1.37
SEC23A-208ENST00000555017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.48□□□□□ -1.372e-14■■□□□ 12
SEC23A-208ENST00000555017 GOLGA2Q08379 1002 aa6.47□□□□□ -1.37
SEC23A-208ENST00000555017 PPP1R37O75864 691 aa6.46□□□□□ -1.38
SEC23A-208ENST00000555017 SEC24BO95487 1268 aa6.46□□□□□ -1.38
SEC23A-208ENST00000555017 ILDR1Q86SU0 546 aaPredicted RBP6.46□□□□□ -1.38
SEC23A-208ENST00000555017 FBXO22Q8NEZ5 403 aa6.46□□□□□ -1.38
SEC23A-208ENST00000555017 OCEL1Q9H607 264 aa6.45□□□□□ -1.38
SEC23A-208ENST00000555017 TAOK2Q9UL54 1235 aa6.45□□□□□ -1.38
SEC23A-208ENST00000555017 IER5LQ5T953 404 aa6.44□□□□□ -1.38
SEC23A-208ENST00000555017 PLCG2P16885 1265 aa6.43□□□□□ -1.38
SEC23A-208ENST00000555017 TMEM121BQ9BXQ6 578 aaPredicted RBP6.43□□□□□ -1.38
SEC23A-208ENST00000555017 SOX12O15370 315 aa6.42□□□□□ -1.38
SEC23A-208ENST00000555017 GTPBP6O43824 516 aaPredicted RBP6.42□□□□□ -1.38
SEC23A-208ENST00000555017 DNAJC5Q9H3Z4 198 aa6.41□□□□□ -1.38
SEC23A-208ENST00000555017 NLRP6P59044 892 aa6.39□□□□□ -1.39
SEC23A-208ENST00000555017 CCDC180Q9P1Z9 1646 aa6.39□□□□□ -1.39
SEC23A-208ENST00000555017 BBXQ8WY36 941 aaPredicted RBP6.38□□□□□ -1.39
SEC23A-208ENST00000555017 TMEM92Q6UXU6 159 aa6.36□□□□□ -1.39
SEC23A-208ENST00000555017 PAXIP1Q6ZW49 1069 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms