RNA–Protein interactions for RNA: ENST00000555014.1

HIF1A-207, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-207ENST00000555014 MIER1Q8N108 512 aa12.24□□□□□ -0.45
HIF1A-207ENST00000555014 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
HIF1A-207ENST00000555014 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
HIF1A-207ENST00000555014 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
HIF1A-207ENST00000555014 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
HIF1A-207ENST00000555014 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
HIF1A-207ENST00000555014 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
HIF1A-207ENST00000555014 C7P10643 843 aa12.16□□□□□ -0.46
HIF1A-207ENST00000555014 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
HIF1A-207ENST00000555014 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
HIF1A-207ENST00000555014 MAP3K13O43283 966 aa12.12□□□□□ -0.47
HIF1A-207ENST00000555014 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
HIF1A-207ENST00000555014 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
HIF1A-207ENST00000555014 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
HIF1A-207ENST00000555014 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
HIF1A-207ENST00000555014 TIE1P35590 1138 aa12.04□□□□□ -0.48
HIF1A-207ENST00000555014 FKBP8Q14318 412 aa12.04□□□□□ -0.48
HIF1A-207ENST00000555014 POTEMA6NI47 508 aa12.02□□□□□ -0.49
HIF1A-207ENST00000555014 MAMSTRQ6ZN01 415 aa12.02□□□□□ -0.49
HIF1A-207ENST00000555014 POTEFA5A3E0 1075 aa12.01□□□□□ -0.49
HIF1A-207ENST00000555014 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
HIF1A-207ENST00000555014 NUBP1P53384 320 aa12□□□□□ -0.49
HIF1A-207ENST00000555014 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
HIF1A-207ENST00000555014 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
HIF1A-207ENST00000555014 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
HIF1A-207ENST00000555014 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
HIF1A-207ENST00000555014 SGIP1Q9BQI5 828 aa11.94□□□□□ -0.5
HIF1A-207ENST00000555014 SEC24BO95487 1268 aa11.93□□□□□ -0.5
HIF1A-207ENST00000555014 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
HIF1A-207ENST00000555014 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
HIF1A-207ENST00000555014 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
HIF1A-207ENST00000555014 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
HIF1A-207ENST00000555014 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
HIF1A-207ENST00000555014 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
HIF1A-207ENST00000555014 IER5LQ5T953 404 aa11.85□□□□□ -0.51
HIF1A-207ENST00000555014 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
HIF1A-207ENST00000555014 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
HIF1A-207ENST00000555014 PYGBP11216 843 aa11.8□□□□□ -0.52
HIF1A-207ENST00000555014 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
HIF1A-207ENST00000555014 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
HIF1A-207ENST00000555014 PLCG2P16885 1265 aa11.75□□□□□ -0.53
HIF1A-207ENST00000555014 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
HIF1A-207ENST00000555014 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
HIF1A-207ENST00000555014 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
HIF1A-207ENST00000555014 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
HIF1A-207ENST00000555014 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
HIF1A-207ENST00000555014 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
HIF1A-207ENST00000555014 GSE1Q14687 1217 aa11.63□□□□□ -0.55
HIF1A-207ENST00000555014 ST18O60284 1047 aa11.61□□□□□ -0.55
HIF1A-207ENST00000555014 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
HIF1A-207ENST00000555014 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
HIF1A-207ENST00000555014 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
HIF1A-207ENST00000555014 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
HIF1A-207ENST00000555014 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
HIF1A-207ENST00000555014 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
HIF1A-207ENST00000555014 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
HIF1A-207ENST00000555014 PSEN1P49768 467 aa11.51□□□□□ -0.57
HIF1A-207ENST00000555014 SNPHO15079 494 aa11.47□□□□□ -0.57
HIF1A-207ENST00000555014 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
HIF1A-207ENST00000555014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.575e-8■□□□□ 9.9
HIF1A-207ENST00000555014 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
HIF1A-207ENST00000555014 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.57
HIF1A-207ENST00000555014 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
HIF1A-207ENST00000555014 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
HIF1A-207ENST00000555014 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
HIF1A-207ENST00000555014 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
HIF1A-207ENST00000555014 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
HIF1A-207ENST00000555014 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
HIF1A-207ENST00000555014 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
HIF1A-207ENST00000555014 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
HIF1A-207ENST00000555014 EMP3P54852 163 aa11.31□□□□□ -0.6
HIF1A-207ENST00000555014 G3V3G9 751 aa11.3□□□□□ -0.6
HIF1A-207ENST00000555014 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
HIF1A-207ENST00000555014 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
HIF1A-207ENST00000555014 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
HIF1A-207ENST00000555014 POTEB3A0JP26 581 aa11.24□□□□□ -0.61
HIF1A-207ENST00000555014 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
HIF1A-207ENST00000555014 POTEBQ6S5H4 581 aa11.24□□□□□ -0.61
HIF1A-207ENST00000555014 HS3ST6Q96QI5 342 aa11.24□□□□□ -0.61
HIF1A-207ENST00000555014 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
HIF1A-207ENST00000555014 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
HIF1A-207ENST00000555014 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
HIF1A-207ENST00000555014 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
HIF1A-207ENST00000555014 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
HIF1A-207ENST00000555014 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
HIF1A-207ENST00000555014 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
HIF1A-207ENST00000555014 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
HIF1A-207ENST00000555014 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
HIF1A-207ENST00000555014 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-207ENST00000555014 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
HIF1A-207ENST00000555014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
HIF1A-207ENST00000555014 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
HIF1A-207ENST00000555014 ERBB3P21860 1342 aa11.09□□□□□ -0.63
HIF1A-207ENST00000555014 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
HIF1A-207ENST00000555014 SOX12O15370 315 aa11.07□□□□□ -0.64
HIF1A-207ENST00000555014 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
HIF1A-207ENST00000555014 RIMBP2O15034 1052 aa11.06□□□□□ -0.64
HIF1A-207ENST00000555014 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
HIF1A-207ENST00000555014 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
HIF1A-207ENST00000555014 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms