RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CCDC61	Q9Y6R9	512 aa		14.23	□□□□□ -0.13
PSMC6-208	ENST00000554956	PHF12	Q96QT6	1004 aa		14.22	□□□□□ -0.13
PSMC6-208	ENST00000554956	GSE1	Q14687	1217 aa		14.21	□□□□□ -0.13
PSMC6-208	ENST00000554956	ZNF579	Q8NAF0	562 aa	Known RBP	14.18	□□□□□ -0.14
PSMC6-208	ENST00000554956	PYGB	P11216	843 aa		14.15	□□□□□ -0.14
PSMC6-208	ENST00000554956	PKD2	Q13563	968 aa		14.14	□□□□□ -0.15
PSMC6-208	ENST00000554956	SP7	Q8TDD2	431 aa	Predicted RBP	14.1	□□□□□ -0.15
PSMC6-208	ENST00000554956	KIF12	Q96FN5	646 aa		14.09	□□□□□ -0.15
PSMC6-208	ENST00000554956	RTN4	Q9NQC3	1192 aa	Known RBP	14.09	□□□□□ -0.15
PSMC6-208	ENST00000554956	MAP3K13	O43283	966 aa		14.06	□□□□□ -0.16
PSMC6-208	ENST00000554956	GABBR2	O75899	941 aa		14.04	□□□□□ -0.16
PSMC6-208	ENST00000554956	ECM2	O94769	699 aa	Predicted RBP	14.04	□□□□□ -0.16
PSMC6-208	ENST00000554956	AMER1	Q5JTC6	1135 aa	Predicted RBP	14.03	□□□□□ -0.16
PSMC6-208	ENST00000554956	MS4A3	Q96HJ5	214 aa		14.03	□□□□□ -0.16
PSMC6-208	ENST00000554956	GALR2	O43603	387 aa	Predicted RBP	14.02	□□□□□ -0.17
PSMC6-208	ENST00000554956	CHRM1	P11229	460 aa	Predicted RBP	14.01	□□□□□ -0.17
PSMC6-208	ENST00000554956	TRIM41	Q8WV44	630 aa		14.01	□□□□□ -0.17
PSMC6-208	ENST00000554956	PCDHB13	Q9Y5F0	798 aa		14	□□□□□ -0.17
PSMC6-208	ENST00000554956	IFNL1	Q8IU54	200 aa		13.97	□□□□□ -0.17
PSMC6-208	ENST00000554956	RNF25	Q96BH1	459 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMC6-208	ENST00000554956	PCDHB8	Q9UN66	801 aa		13.97	□□□□□ -0.17
PSMC6-208	ENST00000554956	RGL2	O15211	777 aa		13.94	□□□□□ -0.18
PSMC6-208	ENST00000554956	TRPC6	Q9Y210	931 aa		13.94	□□□□□ -0.18
PSMC6-208	ENST00000554956	SGIP1	Q9BQI5	828 aa		13.92	□□□□□ -0.18
PSMC6-208	ENST00000554956	CLCN6	P51797	869 aa		13.91	□□□□□ -0.18
PSMC6-208	ENST00000554956	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.88	□□□□□ -0.19
PSMC6-208	ENST00000554956	RIOK3	O14730	519 aa	Known RBP	13.86	□□□□□ -0.19
PSMC6-208	ENST00000554956	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.8	□□□□□ -0.2
PSMC6-208	ENST00000554956	POTEI	P0CG38	1075 aa		13.78	□□□□□ -0.2
PSMC6-208	ENST00000554956	PSEN1	P49768	467 aa		13.78	□□□□□ -0.2
PSMC6-208	ENST00000554956	PDAP1	Q13442	181 aa	Known RBP	13.78	□□□□□ -0.2
PSMC6-208	ENST00000554956	DCBLD2	Q96PD2	775 aa		13.78	□□□□□ -0.2
PSMC6-208	ENST00000554956	TMEM106C	Q9BVX2	250 aa		13.77	□□□□□ -0.21
PSMC6-208	ENST00000554956	TTLL13P	A6NNM8	815 aa		13.76	□□□□□ -0.21
PSMC6-208	ENST00000554956	VGF	O15240	615 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMC6-208	ENST00000554956	DCAF8L2	P0C7V8	631 aa		13.76	□□□□□ -0.21
PSMC6-208	ENST00000554956	TIE1	P35590	1138 aa		13.76	□□□□□ -0.21
PSMC6-208	ENST00000554956	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMC6-208	ENST00000554956	ZFP91	Q96JP5	570 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMC6-208	ENST00000554956	ATMIN	O43313	823 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMC6-208	ENST00000554956	ATN1	P54259	1190 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC6-208	ENST00000554956	ASTL	Q6HA08	431 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC6-208	ENST00000554956	PELP1	Q8IZL8	1130 aa	Known RBP	13.69	□□□□□ -0.22
PSMC6-208	ENST00000554956	TAOK2	Q9UL54	1235 aa		13.67	□□□□□ -0.22
PSMC6-208	ENST00000554956	TRIM35	Q9UPQ4	493 aa		13.67	□□□□□ -0.22
PSMC6-208	ENST00000554956	STK25	O00506	426 aa		13.66	□□□□□ -0.22
PSMC6-208	ENST00000554956	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMC6-208	ENST00000554956	CABP2	Q9NPB3	220 aa		13.64	□□□□□ -0.23
PSMC6-208	ENST00000554956	STK24	Q9Y6E0	443 aa		13.64	□□□□□ -0.23
PSMC6-208	ENST00000554956	CHGA	P10645	457 aa	Known RBP	13.63	□□□□□ -0.23
PSMC6-208	ENST00000554956	HS6ST3	Q8IZP7	471 aa		13.59	□□□□□ -0.23
PSMC6-208	ENST00000554956	GOLGA2	Q08379	1002 aa		13.56	□□□□□ -0.24
PSMC6-208	ENST00000554956	EFCAB3	Q8N7B9	438 aa		13.56	□□□□□ -0.24
PSMC6-208	ENST00000554956	SLC39A7	Q92504	469 aa		13.52	□□□□□ -0.25
PSMC6-208	ENST00000554956	METRN	Q9UJH8	293 aa		13.52	□□□□□ -0.25
PSMC6-208	ENST00000554956	MKRN3	Q13064	507 aa	Known RBP	13.51	□□□□□ -0.25
PSMC6-208	ENST00000554956	C7	P10643	843 aa		13.48	□□□□□ -0.25
PSMC6-208	ENST00000554956	IER5L	Q5T953	404 aa		13.48	□□□□□ -0.25
PSMC6-208	ENST00000554956	COLQ	Q9Y215	455 aa	Predicted RBP	13.48	□□□□□ -0.25
PSMC6-208	ENST00000554956	POTEF	A5A3E0	1075 aa		13.47	□□□□□ -0.25
PSMC6-208	ENST00000554956	IRX5	P78411	483 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMC6-208	ENST00000554956	NKX1-1	Q15270	411 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMC6-208	ENST00000554956	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.44	□□□□□ -0.26	9e-9	■■□□□ 13.4
PSMC6-208	ENST00000554956	PHF8	Q9UPP1	1060 aa		13.44	□□□□□ -0.26
PSMC6-208	ENST00000554956	SEC24B	O95487	1268 aa		13.43	□□□□□ -0.26
PSMC6-208	ENST00000554956	MFRP	Q9BY79	579 aa		13.42	□□□□□ -0.26
PSMC6-208	ENST00000554956	DNAJC5	Q9H3Z4	198 aa		13.42	□□□□□ -0.26
PSMC6-208	ENST00000554956	SOX12	O15370	315 aa		13.41	□□□□□ -0.26
PSMC6-208	ENST00000554956	PLCG2	P16885	1265 aa		13.4	□□□□□ -0.26
PSMC6-208	ENST00000554956	PDCD7	Q8N8D1	485 aa	Known RBP	13.4	□□□□□ -0.26
PSMC6-208	ENST00000554956	OCEL1	Q9H607	264 aa		13.39	□□□□□ -0.27
PSMC6-208	ENST00000554956	ILDR1	Q86SU0	546 aa	Predicted RBP	13.38	□□□□□ -0.27
PSMC6-208	ENST00000554956	MS4A4A	Q96JQ5	239 aa		13.38	□□□□□ -0.27
PSMC6-208	ENST00000554956	DPY19L2	Q6NUT2	758 aa		13.37	□□□□□ -0.27
PSMC6-208	ENST00000554956	FBXO22	Q8NEZ5	403 aa		13.37	□□□□□ -0.27
PSMC6-208	ENST00000554956	BBX	Q8WY36	941 aa	Predicted RBP	13.37	□□□□□ -0.27
PSMC6-208	ENST00000554956	POTEB2	H3BUK9	544 aa		13.35	□□□□□ -0.27
PSMC6-208	ENST00000554956	NLRP6	P59044	892 aa		13.35	□□□□□ -0.27
PSMC6-208	ENST00000554956	GTPBP6	O43824	516 aa	Predicted RBP	13.29	□□□□□ -0.28
PSMC6-208	ENST00000554956	POTEJ	P0CG39	1038 aa		13.29	□□□□□ -0.28
PSMC6-208	ENST00000554956	PPP1R37	O75864	691 aa		13.27	□□□□□ -0.29
PSMC6-208	ENST00000554956	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.26	□□□□□ -0.29
PSMC6-208	ENST00000554956	LHX8	Q68G74	356 aa		13.24	□□□□□ -0.29
PSMC6-208	ENST00000554956	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.23	□□□□□ -0.29
PSMC6-208	ENST00000554956	CFAP44	Q96MT7	982 aa		13.21	□□□□□ -0.29
PSMC6-208	ENST00000554956	BOLA1	Q9Y3E2	137 aa		13.2	□□□□□ -0.3
PSMC6-208	ENST00000554956	SPRYD3	Q8NCJ5	442 aa		13.19	□□□□□ -0.3
PSMC6-208	ENST00000554956	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.19	□□□□□ -0.3
PSMC6-208	ENST00000554956	RYDEN	Q9NUL5	291 aa	Known RBP	13.19	□□□□□ -0.3
PSMC6-208	ENST00000554956	MICALL2	Q8IY33	904 aa		13.18	□□□□□ -0.3
PSMC6-208	ENST00000554956		G3V3G9	751 aa		13.15	□□□□□ -0.3
PSMC6-208	ENST00000554956	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.13	□□□□□ -0.31
PSMC6-208	ENST00000554956	OTUD5	Q96G74	571 aa		13.12	□□□□□ -0.31
PSMC6-208	ENST00000554956	C3orf67	Q6ZVT6	689 aa		13.1	□□□□□ -0.31
PSMC6-208	ENST00000554956	SCUBE2	Q9NQ36	999 aa		13.09	□□□□□ -0.31
PSMC6-208	ENST00000554956	PLCB2	Q00722	1185 aa		13.08	□□□□□ -0.32
PSMC6-208	ENST00000554956	MAMSTR	Q6ZN01	415 aa		13.08	□□□□□ -0.32
PSMC6-208	ENST00000554956	TMEM92	Q6UXU6	159 aa		13.05	□□□□□ -0.32
PSMC6-208	ENST00000554956	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.05	□□□□□ -0.32
PSMC6-208	ENST00000554956	CADPS2	Q86UW7	1296 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms