RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
LINC01550-204ENST00000554822 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
LINC01550-204ENST00000554822 PHF12Q96QT6 1004 aa13.49□□□□□ -0.25
LINC01550-204ENST00000554822 GSE1Q14687 1217 aa13.48□□□□□ -0.25
LINC01550-204ENST00000554822 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
LINC01550-204ENST00000554822 GABBR2O75899 941 aa13.46□□□□□ -0.25
LINC01550-204ENST00000554822 PYGBP11216 843 aa13.4□□□□□ -0.26
LINC01550-204ENST00000554822 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
LINC01550-204ENST00000554822 MAP3K13O43283 966 aa13.35□□□□□ -0.27
LINC01550-204ENST00000554822 PKD2Q13563 968 aa13.33□□□□□ -0.28
LINC01550-204ENST00000554822 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
LINC01550-204ENST00000554822 CLCN6P51797 869 aa13.31□□□□□ -0.28
LINC01550-204ENST00000554822 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
LINC01550-204ENST00000554822 CHRM1P11229 460 aaPredicted RBP13.3□□□□□ -0.28
LINC01550-204ENST00000554822 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
LINC01550-204ENST00000554822 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
LINC01550-204ENST00000554822 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
LINC01550-204ENST00000554822 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
LINC01550-204ENST00000554822 SGIP1Q9BQI5 828 aa13.25□□□□□ -0.29
LINC01550-204ENST00000554822 PCDHB8Q9UN66 801 aa13.23□□□□□ -0.29
LINC01550-204ENST00000554822 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
LINC01550-204ENST00000554822 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
LINC01550-204ENST00000554822 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
LINC01550-204ENST00000554822 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
LINC01550-204ENST00000554822 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
LINC01550-204ENST00000554822 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
LINC01550-204ENST00000554822 RGL2O15211 777 aa13.15□□□□□ -0.3
LINC01550-204ENST00000554822 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
LINC01550-204ENST00000554822 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
LINC01550-204ENST00000554822 BMP2KQ9NSY1 1161 aaPredicted RBP13.09□□□□□ -0.31
LINC01550-204ENST00000554822 TIE1P35590 1138 aa13.08□□□□□ -0.32
LINC01550-204ENST00000554822 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
LINC01550-204ENST00000554822 PSEN1P49768 467 aa13.06□□□□□ -0.32
LINC01550-204ENST00000554822 TMEM106CQ9BVX2 250 aa13.06□□□□□ -0.32
LINC01550-204ENST00000554822 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
LINC01550-204ENST00000554822 PDAP1Q13442 181 aaKnown RBP13.05□□□□□ -0.32
LINC01550-204ENST00000554822 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
LINC01550-204ENST00000554822 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
LINC01550-204ENST00000554822 VGFO15240 615 aaPredicted RBP13.02□□□□□ -0.33
LINC01550-204ENST00000554822 LHX8Q68G74 356 aa13.02□□□□□ -0.33
LINC01550-204ENST00000554822 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
LINC01550-204ENST00000554822 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
LINC01550-204ENST00000554822 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
LINC01550-204ENST00000554822 TAOK2Q9UL54 1235 aa12.97□□□□□ -0.33
LINC01550-204ENST00000554822 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
LINC01550-204ENST00000554822 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
LINC01550-204ENST00000554822 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
LINC01550-204ENST00000554822 STK25O00506 426 aa12.91□□□□□ -0.34
LINC01550-204ENST00000554822 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
LINC01550-204ENST00000554822 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
LINC01550-204ENST00000554822 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
LINC01550-204ENST00000554822 SLC39A7Q92504 469 aa12.88□□□□□ -0.35
LINC01550-204ENST00000554822 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
LINC01550-204ENST00000554822 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
LINC01550-204ENST00000554822 C7P10643 843 aa12.85□□□□□ -0.35
LINC01550-204ENST00000554822 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
LINC01550-204ENST00000554822 EFCAB3Q8N7B9 438 aa12.84□□□□□ -0.35
LINC01550-204ENST00000554822 IER5LQ5T953 404 aa12.82□□□□□ -0.36
LINC01550-204ENST00000554822 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
LINC01550-204ENST00000554822 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
LINC01550-204ENST00000554822 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
LINC01550-204ENST00000554822 SEC24BO95487 1268 aa12.79□□□□□ -0.36
LINC01550-204ENST00000554822 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
LINC01550-204ENST00000554822 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
LINC01550-204ENST00000554822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC01550-204ENST00000554822 PLCG2P16885 1265 aa12.74□□□□□ -0.37
LINC01550-204ENST00000554822 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
LINC01550-204ENST00000554822 SOX12O15370 315 aa12.73□□□□□ -0.37
LINC01550-204ENST00000554822 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
LINC01550-204ENST00000554822 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
LINC01550-204ENST00000554822 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
LINC01550-204ENST00000554822 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
LINC01550-204ENST00000554822 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
LINC01550-204ENST00000554822 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
LINC01550-204ENST00000554822 OTUD5Q96G74 571 aa12.67□□□□□ -0.38
LINC01550-204ENST00000554822 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
LINC01550-204ENST00000554822 NLRP6P59044 892 aa12.65□□□□□ -0.38
LINC01550-204ENST00000554822 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
LINC01550-204ENST00000554822 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
LINC01550-204ENST00000554822 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
LINC01550-204ENST00000554822 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
LINC01550-204ENST00000554822 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
LINC01550-204ENST00000554822 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
LINC01550-204ENST00000554822 PPP1R37O75864 691 aa12.54□□□□□ -0.4
LINC01550-204ENST00000554822 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
LINC01550-204ENST00000554822 G3V3G9 751 aa12.51□□□□□ -0.41
LINC01550-204ENST00000554822 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
LINC01550-204ENST00000554822 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
LINC01550-204ENST00000554822 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
LINC01550-204ENST00000554822 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
LINC01550-204ENST00000554822 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
LINC01550-204ENST00000554822 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
LINC01550-204ENST00000554822 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
LINC01550-204ENST00000554822 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
LINC01550-204ENST00000554822 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
LINC01550-204ENST00000554822 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
LINC01550-204ENST00000554822 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
LINC01550-204ENST00000554822 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
LINC01550-204ENST00000554822 TMEM92Q6UXU6 159 aa12.35□□□□□ -0.43
LINC01550-204ENST00000554822 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms