RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 EVX2Q03828 476 aa12.22□□□□□ -0.45
PCNX1-208ENST00000554707 PKD2Q13563 968 aa12.21□□□□□ -0.45
PCNX1-208ENST00000554707 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
PCNX1-208ENST00000554707 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
PCNX1-208ENST00000554707 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
PCNX1-208ENST00000554707 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
PCNX1-208ENST00000554707 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
PCNX1-208ENST00000554707 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
PCNX1-208ENST00000554707 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
PCNX1-208ENST00000554707 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
PCNX1-208ENST00000554707 CLCN6P51797 869 aa12.05□□□□□ -0.48
PCNX1-208ENST00000554707 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
PCNX1-208ENST00000554707 PYGBP11216 843 aa12.04□□□□□ -0.48
PCNX1-208ENST00000554707 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
PCNX1-208ENST00000554707 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
PCNX1-208ENST00000554707 RGL2O15211 777 aa11.98□□□□□ -0.49
PCNX1-208ENST00000554707 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
PCNX1-208ENST00000554707 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.49
PCNX1-208ENST00000554707 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
PCNX1-208ENST00000554707 MAP3K13O43283 966 aa11.95□□□□□ -0.5
PCNX1-208ENST00000554707 GABBR2O75899 941 aa11.94□□□□□ -0.5
PCNX1-208ENST00000554707 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
PCNX1-208ENST00000554707 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
PCNX1-208ENST00000554707 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
PCNX1-208ENST00000554707 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
PCNX1-208ENST00000554707 PCDHB8Q9UN66 801 aa11.86□□□□□ -0.51
PCNX1-208ENST00000554707 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
PCNX1-208ENST00000554707 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
PCNX1-208ENST00000554707 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
PCNX1-208ENST00000554707 PSEN1P49768 467 aa11.81□□□□□ -0.52
PCNX1-208ENST00000554707 GALR2O43603 387 aaPredicted RBP11.8□□□□□ -0.52
PCNX1-208ENST00000554707 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
PCNX1-208ENST00000554707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
PCNX1-208ENST00000554707 TIE1P35590 1138 aa11.78□□□□□ -0.52
PCNX1-208ENST00000554707 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
PCNX1-208ENST00000554707 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.53
PCNX1-208ENST00000554707 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
PCNX1-208ENST00000554707 STK25O00506 426 aa11.75□□□□□ -0.53
PCNX1-208ENST00000554707 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
PCNX1-208ENST00000554707 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
PCNX1-208ENST00000554707 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
PCNX1-208ENST00000554707 TMEM106CQ9BVX2 250 aa11.71□□□□□ -0.53
PCNX1-208ENST00000554707 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
PCNX1-208ENST00000554707 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
PCNX1-208ENST00000554707 LHX8Q68G74 356 aa11.69□□□□□ -0.54
PCNX1-208ENST00000554707 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-208ENST00000554707 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
PCNX1-208ENST00000554707 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
PCNX1-208ENST00000554707 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
PCNX1-208ENST00000554707 ATMINO43313 823 aaPredicted RBP11.65□□□□□ -0.54
PCNX1-208ENST00000554707 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
PCNX1-208ENST00000554707 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
PCNX1-208ENST00000554707 SOX12O15370 315 aa11.61□□□□□ -0.55
PCNX1-208ENST00000554707 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
PCNX1-208ENST00000554707 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
PCNX1-208ENST00000554707 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
PCNX1-208ENST00000554707 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
PCNX1-208ENST00000554707 MKRN3Q13064 507 aaKnown RBP11.58□□□□□ -0.56
PCNX1-208ENST00000554707 EFCAB3Q8N7B9 438 aa11.58□□□□□ -0.56
PCNX1-208ENST00000554707 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
PCNX1-208ENST00000554707 IER5LQ5T953 404 aa11.57□□□□□ -0.56
PCNX1-208ENST00000554707 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
PCNX1-208ENST00000554707 NLRP6P59044 892 aa11.53□□□□□ -0.56
PCNX1-208ENST00000554707 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
PCNX1-208ENST00000554707 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
PCNX1-208ENST00000554707 MFRPQ9BY79 579 aa11.51□□□□□ -0.57
PCNX1-208ENST00000554707 GTPBP6O43824 516 aaPredicted RBP11.5□□□□□ -0.57
PCNX1-208ENST00000554707 C7P10643 843 aa11.5□□□□□ -0.57
PCNX1-208ENST00000554707 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
PCNX1-208ENST00000554707 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
PCNX1-208ENST00000554707 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
PCNX1-208ENST00000554707 FBXO22Q8NEZ5 403 aa11.48□□□□□ -0.57
PCNX1-208ENST00000554707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.574e-9■□□□□ 11.2
PCNX1-208ENST00000554707 PHF8Q9UPP1 1060 aa11.47□□□□□ -0.57
PCNX1-208ENST00000554707 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
PCNX1-208ENST00000554707 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
PCNX1-208ENST00000554707 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
PCNX1-208ENST00000554707 PLCG2P16885 1265 aa11.41□□□□□ -0.58
PCNX1-208ENST00000554707 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
PCNX1-208ENST00000554707 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
PCNX1-208ENST00000554707 SEC24BO95487 1268 aa11.4□□□□□ -0.58
PCNX1-208ENST00000554707 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
PCNX1-208ENST00000554707 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
PCNX1-208ENST00000554707 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
PCNX1-208ENST00000554707 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
PCNX1-208ENST00000554707 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
PCNX1-208ENST00000554707 PPP1R37O75864 691 aa11.32□□□□□ -0.6
PCNX1-208ENST00000554707 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
PCNX1-208ENST00000554707 G3V3G9 751 aa11.28□□□□□ -0.6
PCNX1-208ENST00000554707 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-208ENST00000554707 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
PCNX1-208ENST00000554707 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
PCNX1-208ENST00000554707 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
PCNX1-208ENST00000554707 OTUD5Q96G74 571 aa11.25□□□□□ -0.61
PCNX1-208ENST00000554707 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
PCNX1-208ENST00000554707 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
PCNX1-208ENST00000554707 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
PCNX1-208ENST00000554707 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
PCNX1-208ENST00000554707 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
PCNX1-208ENST00000554707 PDE4AP27815 886 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms