RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 HSP90AA1P07900 732 aaKnown RBP4.58□□□□□ -1.68
SYNE2-212ENST00000554584 PPM1GO15355 546 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-212ENST00000554584 ZNF330Q9Y3S2 320 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-212ENST00000554584 GTF3C3Q9Y5Q9 886 aa4.57□□□□□ -1.68
SYNE2-212ENST00000554584 CCDC9Q9Y3X0 531 aaKnown RBP4.57□□□□□ -1.68
SYNE2-212ENST00000554584 TNNT2P45379 298 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-212ENST00000554584 NAP1L2Q9ULW6 460 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-212ENST00000554584 NCLP19338 710 aaKnown RBP4.55□□□□□ -1.68
SYNE2-212ENST00000554584 SAFB2Q14151 953 aaKnown RBP eCLIP4.55□□□□□ -1.68
SYNE2-212ENST00000554584 PHF23Q9BUL5 403 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-212ENST00000554584 WDR70Q9NW82 654 aa4.55□□□□□ -1.68
SYNE2-212ENST00000554584 LAS1LQ9Y4W2 734 aaKnown RBP4.55□□□□□ -1.68
SYNE2-212ENST00000554584 FAM9BQ8IZU0 186 aa4.54□□□□□ -1.68
SYNE2-212ENST00000554584 DIEXFQ68CQ4 756 aaKnown RBP4.54□□□□□ -1.68
SYNE2-212ENST00000554584 NEFMP07197 916 aa4.54□□□□□ -1.68
SYNE2-212ENST00000554584 KRI1Q8N9T8 703 aaKnown RBP4.53□□□□□ -1.68
SYNE2-212ENST00000554584 RTN4Q9NQC3 1192 aaKnown RBP4.53□□□□□ -1.68
SYNE2-212ENST00000554584 NUTM2DQ5VT03 806 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-212ENST00000554584 NEUROD2Q15784 382 aa4.52□□□□□ -1.69
SYNE2-212ENST00000554584 NUTM2FA1L443 756 aa4.51□□□□□ -1.69
SYNE2-212ENST00000554584 MSH5O43196 834 aa4.51□□□□□ -1.69
SYNE2-212ENST00000554584 PATL2C9JE40 543 aaKnown RBP4.5□□□□□ -1.69
SYNE2-212ENST00000554584 IBSPP21815 317 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-212ENST00000554584 CCDC136Q96JN2 1154 aa4.5□□□□□ -1.69
SYNE2-212ENST00000554584 SPRYD3Q8NCJ5 442 aa4.5□□□□□ -1.69
SYNE2-212ENST00000554584 SAMD1Q6SPF0 538 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-212ENST00000554584 APBB1O00213 710 aa4.49□□□□□ -1.69
SYNE2-212ENST00000554584 AEBP2Q6ZN18 517 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-212ENST00000554584 PPP1R15AO75807 674 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-212ENST00000554584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-212ENST00000554584 VSIG10Q8N0Z9 540 aa4.48□□□□□ -1.69
SYNE2-212ENST00000554584 TMC1Q8TDI8 760 aa4.48□□□□□ -1.69
SYNE2-212ENST00000554584 ECM2O94769 699 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-212ENST00000554584 KDM4AO75164 1064 aa4.48□□□□□ -1.69
SYNE2-212ENST00000554584 RGL3Q3MIN7 710 aa4.48□□□□□ -1.69
SYNE2-212ENST00000554584 PLCB2Q00722 1185 aa4.47□□□□□ -1.69
SYNE2-212ENST00000554584 BCL11BQ9C0K0 894 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-212ENST00000554584 C11orf95C9JLR9 678 aaPredicted RBP4.46□□□□□ -1.69
SYNE2-212ENST00000554584 LTV1Q96GA3 475 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-212ENST00000554584 NPM1P06748 294 aaKnown RBP eCLIP4.46□□□□□ -1.7
SYNE2-212ENST00000554584 WWC3Q9ULE0 1092 aa4.45□□□□□ -1.7
SYNE2-212ENST00000554584 CNKSR2Q8WXI2 1034 aa4.45□□□□□ -1.7
SYNE2-212ENST00000554584 PLCD3Q8N3E9 789 aa4.45□□□□□ -1.7
SYNE2-212ENST00000554584 DHX37Q8IY37 1157 aaKnown RBP4.45□□□□□ -1.7
SYNE2-212ENST00000554584 FKBP8Q14318 412 aa4.45□□□□□ -1.7
SYNE2-212ENST00000554584 CHMP4CQ96CF2 233 aa4.44□□□□□ -1.7
SYNE2-212ENST00000554584 RRP7BPQ9NSQ0 103 aa4.44□□□□□ -1.7
SYNE2-212ENST00000554584 VPS53Q5VIR6 699 aa4.44□□□□□ -1.7
SYNE2-212ENST00000554584 DDX10Q13206 875 aaKnown RBP4.44□□□□□ -1.7
SYNE2-212ENST00000554584 STK26Q9P289 416 aa4.43□□□□□ -1.7
SYNE2-212ENST00000554584 NISCHQ9Y2I1 1504 aa4.43□□□□□ -1.7
SYNE2-212ENST00000554584 ACIN1Q9UKV3 1341 aaKnown RBP4.43□□□□□ -1.7
SYNE2-212ENST00000554584 PPP1R1BQ9UD71 204 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-212ENST00000554584 FBXW7Q969H0 707 aa4.43□□□□□ -1.7
SYNE2-212ENST00000554584 ANP32BQ92688 251 aaKnown RBP4.43□□□□□ -1.7
SYNE2-212ENST00000554584 GLIPR1L2Q4G1C9 344 aa4.42□□□□□ -1.7
SYNE2-212ENST00000554584 RAD21O60216 631 aa4.42□□□□□ -1.7
SYNE2-212ENST00000554584 GOLGA2Q08379 1002 aa4.42□□□□□ -1.7
SYNE2-212ENST00000554584 CREBRFQ8IUR6 639 aa4.41□□□□□ -1.7
SYNE2-212ENST00000554584 DNTTIP2Q5QJE6 756 aaKnown RBP4.41□□□□□ -1.7
SYNE2-212ENST00000554584 NOL8Q76FK4 1167 aaKnown RBP4.41□□□□□ -1.7
SYNE2-212ENST00000554584 NGEFQ8N5V2 710 aa4.41□□□□□ -1.7
SYNE2-212ENST00000554584 PTMAP06454 111 aaKnown RBP4.41□□□□□ -1.7
SYNE2-212ENST00000554584 SLC4A3P48751 1232 aa4.41□□□□□ -1.7
SYNE2-212ENST00000554584 OS9Q13438 667 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-212ENST00000554584 PAK3O75914 559 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-212ENST00000554584 CFAP44Q96MT7 982 aa4.39□□□□□ -1.71
SYNE2-212ENST00000554584 AK7Q96M32 723 aa4.39□□□□□ -1.71
SYNE2-212ENST00000554584 ANP32CO43423 234 aa4.39□□□□□ -1.71
SYNE2-212ENST00000554584 FOSBP53539 338 aa4.39□□□□□ -1.71
SYNE2-212ENST00000554584 TCERG1O14776 1098 aaKnown RBP4.39□□□□□ -1.71
SYNE2-212ENST00000554584 FOXD4L1Q9NU39 408 aa4.39□□□□□ -1.71
SYNE2-212ENST00000554584 PPM1FP49593 454 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-212ENST00000554584 FOXD4L5Q5VV16 416 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-212ENST00000554584 FOXD4L4Q8WXT5 416 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-212ENST00000554584 TAF7LQ5H9L4 462 aa4.39□□□□□ -1.71
SYNE2-212ENST00000554584 ANP32AP39687 249 aaKnown RBP4.38□□□□□ -1.71
SYNE2-212ENST00000554584 STK11IPQ8N1F8 1099 aa4.38□□□□□ -1.71
SYNE2-212ENST00000554584 FAM177BA6PVY3 158 aa4.38□□□□□ -1.71
SYNE2-212ENST00000554584 CSB-PGBD3P0DP91 1061 aa4.38□□□□□ -1.71
SYNE2-212ENST00000554584 HNRNPUQ00839 825 aaKnown RBP eCLIP4.38□□□□□ -1.71
SYNE2-212ENST00000554584 RGS3P49796 1198 aa4.38□□□□□ -1.71
SYNE2-212ENST00000554584 FGD1P98174 961 aa4.38□□□□□ -1.71
SYNE2-212ENST00000554584 PNNQ9H307 717 aaKnown RBP4.37□□□□□ -1.71
SYNE2-212ENST00000554584 MTMR7Q9Y216 660 aa4.37□□□□□ -1.71
SYNE2-212ENST00000554584 GRM1Q13255 1194 aa4.37□□□□□ -1.71
SYNE2-212ENST00000554584 NAP1L5Q96NT1 182 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-212ENST00000554584 ZRSR1Q15695 479 aaKnown RBP4.37□□□□□ -1.71
SYNE2-212ENST00000554584 ZNF219Q9P2Y4 722 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-212ENST00000554584 G3V3G9 751 aa4.36□□□□□ -1.71
SYNE2-212ENST00000554584 DCAF8Q5TAQ9 597 aa4.36□□□□□ -1.71
SYNE2-212ENST00000554584 CHMP3Q9Y3E7 222 aa4.36□□□□□ -1.71
SYNE2-212ENST00000554584 NUTM2BA6NNL0 878 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-212ENST00000554584 NUTM2EB1AL46 878 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-212ENST00000554584 NUTM2AQ8IVF1 878 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-212ENST00000554584 TTC16Q8NEE8 873 aa4.36□□□□□ -1.71
SYNE2-212ENST00000554584 NECTIN2Q92692 538 aa4.35□□□□□ -1.71
SYNE2-212ENST00000554584 CWC22Q9HCG8 908 aaKnown RBP4.35□□□□□ -1.71
SYNE2-212ENST00000554584 NUTM2GQ5VZR2 741 aa4.35□□□□□ -1.71
SYNE2-212ENST00000554584 FRAT1Q92837 279 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms